FFCP PHASE1:Hg19::chr21:27484338..27484350,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=351 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=620 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=49bp_to_ENST00000462267_5end | |||
|coexpression_cluster_id=C1073 | |||
|description=CAGE_peak_18_at_APP_5end | |||
|id=chr21:27484338..27484350,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!9.40e-16!659;UBERON:0000467!7.67e-14!625;UBERON:0000480!1.39e-13!626;UBERON:0000922!4.67e-13!612;UBERON:0002050!5.51e-12!605;UBERON:0005423!5.51e-12!605;UBERON:0000923!1.17e-11!604;UBERON:0005291!1.17e-11!604;UBERON:0006598!1.17e-11!604;UBERON:0002532!1.17e-11!604;UBERON:0004111!2.00e-11!241;UBERON:0000481!3.03e-10!347;UBERON:0000477!6.12e-09!286;UBERON:0000475!1.47e-08!365;UBERON:0000062!2.44e-08!511;UBERON:0002346!8.80e-08!90;UBERON:0002020!1.31e-07!34;UBERON:0003528!1.31e-07!34;UBERON:0001049!1.66e-07!57;UBERON:0005068!1.66e-07!57;UBERON:0006241!1.66e-07!57;UBERON:0007135!1.66e-07!57;UBERON:0007023!1.97e-07!115;UBERON:0000483!2.14e-07!309;UBERON:0003075!2.17e-07!86;UBERON:0007284!2.17e-07!86;UBERON:0000119!2.82e-07!312;UBERON:0001893!3.45e-07!34;UBERON:0000025!3.58e-07!194;UBERON:0002791!4.56e-07!33;UBERON:0002619!8.78e-07!22;UBERON:0001869!8.81e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;9.83e-07;22!UBERON:0000079;9.83e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.93e-10,240;UBERON:0003528,1.05e-07,34;UBERON:0002020,1.05e-07,34;UBERON:0003101,4.15e-07,22;UBERON:0000079,4.15e-07,22;UBERON:0003135,4.82e-07,11;UBERON:0007023,9.86e-07,114 | |||
|phase1_expression=0,1.07050261945492,0.140954404095971,0,0.893922188854576,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0.527533956456907,0.495065411840187,0.331397375727916,2.01697543935533,3.01347264011988,4.38186054232424,0.975865597581014,0.369363174230364,0.612002073732759,0.313454721478088,0.286235987131057,0.958120975510189,0.376627918784408,0.152826811495903,0.0821005894499457,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,1.00272223735071,0.651032612147555,0,0,0,0.290796477559129,0,0.242584061187816,0.464858073811369,0.411167888021826,0,0.575384784644301,0.512321413058201,0.47296445977717,0.689491361473237,0,0,0.188242339542605,0,0.674170453335254,0,0.320929027076094,0.639337125799041,0.329851300186716,1.19678194572979,1.27867425159808,0,0,0,0,0.521482918420201,0.868755378820466,1.21079900526674,0,0,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0,0,0.724232594804119,0,1.94653948121054,0.283604451492204,0.665188192387692,0.966182642624386,0.785874452986276,0,1.11235332835329,0,0.174129737299267,0.26591592103773,0.715471872916026,0.571994910780128,0.74291500265913,0.596287222100115,0,0.347140501607594,4.52246353539208,1.25849830862972,1.6507082516404,0.626984899610432,2.32575083252396,0.71153252537342,0.66944122552934,0,0,1.70843440283719,0.367663080345869,1.62028389576352,0.625098097988558,2.91888184414021,1.35133776579987,0,0,1.83201743930407,0,0,0,0.993943903390637,0.759783069987479,0.397227542439656,2.86836620748814,0.354668382198357,0,0,0,0,0.538842688278752,0.490385709340376,0.151357427644931,0,0,0.312160076830321,0,0.896692083310806,0.587172493218824,0.323745888736263,0.140450806702248,0.408308342509787,1.10550885580591,0.516628905878827,1.18800285728205,2.22540236350701,0,0,0.505008341862199,0.500474079487857,0,0,0.919463387397059,0.300476117813194,0.113432183160021,0.89694817844431,1.70845911054854,0.635795703478686,0.300091096084402,0.206105058476878,0.515281080091258,0.37223371266318,0.506328996723799,0.0974370051611986,0,0.276149695926898,0.646584227275248,0.710019185033229,0.201504196455281,0,0.386521706326594,1.63647672354501,0.286804595389004,0.731842236777572,0.265059536642971,0.348581828608555,0.518305275076852,0.756962552626885,0.72995471815166,0,1.28648187638577,0,0,0.721879481669586,0.591534000199219,0.168584690078102,0.241011029883482,1.10293972732394,0.653638332277218,0,0.943819157121151,0.98110732562673,0,0.738155454624648,0,0.4115740113314,1.47008711385542,1.26755034821831,0.982827216677626,1.18157981336281,0,0.245976877086227,0.514703430895577,0.98775256867763,0,0.502644862058154,0.648119116109707,0.325808305310325,0,1.44331342025273,0.34779121492523,0.117408694235822,1.01056513432752,1.38895653772983,3.04406643575357,0,0,0.492434012174795,0,0.297262324577456,0.93733833986777,1.84780341018745,0.708875486211932,0.716468181622786,0.581267877027924,0.383382679165211,0,0,0,0,0,0.444485260045183,0,0,0,0.411309970813294,0.600686115687835,0,0.112131084345361,0.43596006883328,0.2933531432838,0.387815147273333,0,0,0.531876233169741,0,0,1.41849132023278,0,0.714889968290738,0,0.823240336780769,0,0,0.791951872933429,0,0,0.899756920638513,0,0,0,0.718874566474748,0,0,0.723906533337896,1.02738161275192,0.716243852959582,0,0,0.215627574859517,0,0.508189248444927,0,0,0.167516265334349,1.27587750330633,0,0,0,0.613457458595699,0.500170521059677,0.271265023699736,0.623912584592421,2.14114786556594,1.10391690523754,1.05427273493442,0,4.5481500811197,0,0.664225598535437,0.184369168541703,0.868836144680828,0.195801157462741,0,0,0,0.213455115606889,0,1.66435439510497,0,0.744323423456331,0.153461973288062,2.52594084989766,0.512556597022804,0.511707249066704,0.804269605718038,0,0.616838775210622,0.532685175939381,0.164254312027618,0.519254429183621,0.581051892299796,0.241718899183244,5.41367469818869,1.47329582297434,0.459257792658427,0.910455840033585,1.44236856455367,0,0.693138033939733,0,1.46139224653261,0.949964660035881,0,0.850468526382578,0.863663664408557,1.54227252690289,0,0,0.254876273045038,0,0.223874754722178,0,0,0.512900250232778,1.64007322849853,0,0.618246069886334,0.824125183365091,0.660075999364704,0,1.30012049207304,0,0.580024309752732,0.154048617114644,1.5350367472613,0.551346289938122,0.322260734604821,0.435050081742686,0.426133137080504,0.356128142586949,1.81813406897076,4.22818148203234,1.02090169995667,2.52894452138875,0.464845549297286,1.25924938732256,0,0.616067160352178,0,0.869932992075073,0,0.429374660225974,0.372158369359667,0,0.762520775695299,0.255897791311334,0.855877976067841,0,1.56989728039846,0.539617372749944,0.823611089208164,1.17812402345686,0,0,2.52755073743389,0,2.92456187557541,0,0.272999822815972,1.83827061539827,1.13008116620243,0,1.32687795048244,1.75380354101505,0.578775534266688,0.655894752046633,0.405820753925408,0.30982349809975,0.281695602532241,0.143411352204052,0.294747123039363,1.07001315444375,0,0.211107635297664,0,0,0,0.192444225451024,0,1.08890984861323,0.470719003883896,1.29151611801369,0,1.33029046061003,1.1486170010348,0,0,1.13929437434833,0,0,0,0,0.79312517629427,0.427296284509893,1.92495971052672,1.22520107990516,0.185803175125719,0,0,0,0.199579371432817,0,0.423347165447766,0.649243880549111,0.280797178113459,0,0.626719583092093,0,0.846458889008016,0,0.403599414382095,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.37428108081644,0,0.485442086998054,0,1.13654458722565,0.71623345421307,0.593929361665277,2.45728561679386,0,1.26602474769461,0.445234820091624,0,0,0.796991953004279,0.828851746593443,0,0.409074730008619,0,1.24415835064723,0.269605053441981,0.358042349351218,0,1.08507746200627,0,1.11136990144637,2.90799823828566,1.48428957058962,0,0.520855522170466,0.437299999980979,0,0.455173793141999,0.762760950878299,0.236387681767936,0.344743373241465,0.291604613383254,2.08349993919951,0,2.53252521113357,0,0.774054819518572,0.886642856860642,2.19385397153973,0.21787692703798,0.278847488557207,0.0769502585037971,0.569710279235006,0.23056390438806,0.269272933229316,0.434589487688032,0.638002319463839,0.641183153813036,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0.158936578980379,2.10998064528027,0.326465616318295,0.141353071433941,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.808813595768125,1.60515529459758,3.04543779442941,0,0.391329237864179,0.485560759068186,3.15667522279512,2.41981432097328,2.14250933141343,0.442306057399416,0.150323419414493,0,1.32930774541437,0.992975867626496,0,1.19472429772959,0.284609546029793,0.970722711091971,0.867798691675654,0.293977192243133,0,1.7472666824203,0.51595809741485,0.967563312890852,0.511625219603299,0.903270027585302,0.581934098930517,0.529536760149002,1.80784592624426,0.274083849293502,0.794858446811959,0.886351143382302,0.391102765469606,0.320635281006135,0.213452994739353,3.79638258206047,1.15272333723285,0.229073192331831,0,0.288109595976299,0,0.471388069233591,0.407712618220842,0.627617077873999,0.101998217636322,0.288950589901519,0,1.36905378891993,0,0,0,1.39641200636127,2.06244381610515,0.717873024576814,1.99679000498991,2.57535628881943,0.669514372325618,0.134366944973453,1.08089965062721,0,0.157566364614447,0.247247575143499,0.404421263125109,0.196854963029498,0,0.795229689809303,1.22583065500418,1.92903778158023,0.687697182986169,1.24632101408756,0,0,0.789744236554321,0,0.788057072991982,0.524545881349981,0.316801009558219,1.07572403599707,0,1.42939065274673,1.98627591109629,0.76280561296425,1.08599920350743,1.72844298240254,2.93928624098468,1.19730191562487,0.164185041498678,0.681552087141687,0.906496732161005,0.293104467356165,0,1.29282956361551,1.45455861916959,0,0.704815022316672,0.747511887973863,0.471612915298998,0.828478110694391,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0.157054096250234,2.65820453990096,8.05373348352957,0.876336514945499,0.573409195690071,1.44207766997908,0.496771223531068,0,0.124980407962107,0,0.856396000634902,3.05845565607623,0,0.724605143054126,0.298509605773748,1.16856654923612,1.10961172300523,0.568209015825267,0.50313580350515,1.77962244319307,1.37304041038154,0.453692771289717,0.777186002913902,1.47855149989634,0.955780602982214,0.899606224327209,0.310525913752519,2.90294345488599,1.86089200190596,0.521745061811734,0.450772826991655,1.90402606084398,0.406870733204662,1.09109195521536,0.644463342254931,0,2.78667122089031,1.20008329398946,1.03018711554838,0.336749488765919,0,0,1.71553273099941,1.82696004375648,0.906823702049089,0.231522474323834,1.71315693154527,2.68633261622231,0.926404341482917,0,0.353378291891762,1.54331230616732,1.01365464391844,1.02496607435179,1.38172136692479,0.607719912354764,0.553033744606923,0,0,0,2.29326894192489,0,0,0,0.106691729694141,0,0,0.184105950251841,0.419638523158333,0.622077260032973,0,0.215649622793364,0.786329709279482,0.54604819096007,0.33946505990805,1.48802444071178,0.495743057036009,0,0.318004350653419,0.0788617450012534,0.80057074828547,1.41070377476274,2.1437183414724,0.642292250964595,2.8339315265117,1.59633859057151,5.9483745629819,1.51243017733031,0.622415272177961,3.39098855826887,0,0.490738592505128,0,2.56800037930351,0.577628330751691,0.762764190934334,0,0.198916222116275,0.376051641746286,1.61364054962816,3.12605604493237,0.523813388962845,1.47394725759087,0,0.742913430802341,3.12431239445539,1.2401207790071,0.824405532520789,0,0.548257766857182,3.47347824872506,0.879356221798103,0.255524855279191,0,1.00885116665647,0,0.227662191351298,0.532214220975833,0.115233987555779,0,0.679697329768317,0.591954962065642,0.472775363535873,1.11231401892069,0.549451649953598,3.45654297815204,0.560544326627578,0.913158720509496,0.431855182437243,2.38875843943525,0.643288897589907,0.316027223465453,0.813689977576877,0,1.60342272946051,2.07216164163037,1.0243108625637,1.38251932362818,0,0.236664001461131,0.170426809518315,5.08064460229115,1.14553434272025,0.62041277132864,0,0.782988022584546,0.098150233615243,0.121917924982269,0.647428837187895,0.102662806856247,0,1.94284397223656,0.467878926924211,0.795803100645473,1.30812099855325,0.22589216407792,0.659643100472575,0.452888530700021,0.463044948647668,0.655678681511872,3.76253837089218,1.22574160876953,0.235676547101626,2.1593931382644,0.891139200981258,1.2679671827502,0.509781344063451,0,0.322289439867886,0,0.178553938605658,1.05868461514708,0.160482733378337,0.730336388246517,0.917458566809082,1.00337708206016,0.157771562193185,1.49581278420012,1.74540276136151,1.5870805215462,1.48798007266701,0.924351257262837,0.865253124247578,0.126166424835079,0.218531143927391,0.126698501011437,0.509944148709909,2.40495664739004,1.56221329209236,8.77476387523313,0.378893491091197,1.60778478093707,0,1.65492793379032,1.0661699095049,1.1903221573187,0.0645889098360061,0.124149428591716,0.224263725161227,0.381882949668989,0.808468755832877,0.435433495793923,0.684466602170562,0.0673520530145875,0.0717222053926763,1.99596213927608,0.162806537221949,0.426909383510862,0,0.359300808426348,0,0.122241444182866,1.62758471326295,1.33151354837103,0.805095174364105,0 | |||
|short_description=p18@APP | |||
}} |
Revision as of 13:12, 21 January 2014
Short description: | p18@APP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_18_at_APP_5end |
Coexpression cluster: | C1073_olfactory_Prostate_Cardiac_medial_occipital_seminal_diencephalon |
Association with transcript: | 49bp_to_ENST00000462267_5end |
EntrezGene: | APP |
HGNC: | 620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 1.93e-10 | 240 |
brain grey matter | 1.05e-07 | 34 |
gray matter | 1.05e-07 | 34 |
male organism | 4.15e-07 | 22 |
male reproductive system | 4.15e-07 | 22 |
male reproductive organ | 4.82e-07 | 11 |
adult organism | 9.86e-07 | 114 |