FFCP PHASE1:Hg19::chr22:31365243..31365303,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55000 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=26066 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-330bp_to_NR_002323,uc003ajf.1,uc003ajg.2,uc003ajh.2,uc003aji.2_5end | |||
|description=CAGE_peak_1_at_TUG1_5end | |||
|id=chr22:31365243..31365303,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.41e-14!42;CL:0000860!9.97e-14!45;CL:0000766!3.78e-11!76;CL:0000839!1.36e-10!70;CL:0000557!5.17e-10!71;CL:0002194!6.10e-09!63;CL:0000576!6.10e-09!63;CL:0000040!6.10e-09!63;CL:0000559!6.10e-09!63;CL:0002009!1.21e-08!65;CL:0002031!1.73e-07!124;CL:0000738!2.14e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.92e-16;33!CL:0002057;4.92e-16;33!CL:0000576;2.97e-09;48!CL:0000473;4.70e-09;39!CL:0000234;4.70e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.41e-14,42;CL:0002057,5.41e-14,42;CL:0000766,6.79e-11,72;CL:0000839,2.39e-10,66;CL:0000557,9.30e-10,67;CL:0000473,1.34e-09,48;CL:0000234,1.34e-09,48;CL:0002194,1.08e-08,59;CL:0000576,1.08e-08,59;CL:0000040,1.08e-08,59;CL:0000559,1.08e-08,59;CL:0002009,2.18e-08,61;CL:0002031,3.38e-07,120;CL:0000738,4.17e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-10;42 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.56e-10!102;UBERON:0003061!4.56e-10!102;UBERON:0002193!4.57e-09!112;UBERON:0002371!6.81e-07!80;UBERON:0001474!7.39e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.02e-10,98;UBERON:0003061,9.02e-10,98;UBERON:0002193,9.12e-09,108 | |||
|phase1_expression=12.1724514111273,16.0575392918237,15.3640300464609,18.0131937035635,20.113249249228,19.1914475302081,0,12.0026775951098,11.2309820125931,4.66894479352867,6.97801167972428,10.2667444901181,7.64924236862515,16.8322240025663,18.5582530407633,12.7741777825837,13.8619741445515,9.49403117503585,10.7345215733912,11.0808952269109,8.77202972350288,9.09018692286455,20.036519099174,15.7405588833817,16.9482563452984,11.0799438334529,10.590976039043,10.311112352092,12.194292582316,11.5148819429164,17.0297735647684,6.43594857135249,6.6265302131215,9.98335827450327,15.3385057148997,12.2265539939183,14.9736224060772,26.0377842009982,23.6642448014767,18.4459240108474,21.9437164755126,22.3486629553096,19.318167572564,33.1507984417408,35.8982146504369,25.4713264247207,34.1670684251356,39.4721172500953,55.4374403902235,44.5923208099333,33.8132132618413,38.0736390120622,46.1959212187069,54.8661981046252,54.1705946377367,34.6365904758393,34.6590810573464,27.4162651023003,33.6692281607993,40.4370574115878,37.7208904221434,32.3254274182982,22.738856968866,29.8357325372886,59.7831031574883,55.0363667950406,57.2996469075929,54.77220902597,45.3690139025575,44.3065243198438,44.1941636922359,49.3492032223337,40.5071855924332,13.0978277513404,15.5201138974482,12.5795187305026,19.3205245571972,24.7791873188485,18.8048936435584,16.2457263932512,17.1068342391217,13.8824756861122,21.1195493353587,22.9378216730095,24.9062591081795,24.7503529088574,16.8166314555125,20.6910878383614,21.1534359291156,20.989182599778,22.1993057952685,21.7277760067247,24.4654866000146,2.64342657158052,20.7388168303168,15.2762769169545,22.6216235630908,16.8994627982141,21.1769543969494,19.0592604745373,18.2516469314811,19.4113600351241,9.74133642039557,15.8202848776946,14.435689466267,19.273448828775,21.9351129649663,13.5776798909216,13.6562314937872,16.2793525557639,15.7519510137934,23.1842468588042,23.5775635427676,23.276052043805,29.2699466653935,20.3956816855619,18.0113631992903,19.2431369470273,16.4462799812677,24.8481023172795,26.6944216081132,25.6622052001061,35.9874534595877,31.3567197328325,23.7368380449457,28.650047497326,21.3493279199472,16.3301462012033,12.8371293976084,21.4340117746542,26.8187552945358,15.4261197731836,20.8415975804954,16.2647618573055,19.0508406041638,21.0027452493194,7.95285947051099,13.6257763684738,16.73266263804,16.6297048096923,16.8642788530802,20.5637148531409,4.00724817121796,5.56176664176644,12.332800958878,18.2836224164231,14.3594597360374,20.5101936902594,17.1598473234038,26.0020250930695,7.9504962946682,15.4842227119102,13.1913390610886,10.1755429546322,10.4874859052476,16.7822005583441,11.076733226451,19.639673696869,21.3459757612026,27.7818108594676,14.0990260988201,12.9246257972147,18.3046543161127,22.0597848207521,14.5825550618717,19.020842124509,20.2076435363553,19.1439516821648,1.53316637465883,10.4419222552494,14.2897360265718,44.8053419282615,54.2892369807656,5.66922267785295,16.4000744059455,17.3483800980474,44.8867122956812,43.5991663538197,16.3147455811244,21.86642640555,12.8098794875646,18.2533985828698,26.4529380089801,32.4652719687948,21.4135093078631,24.9739755614137,32.2658517708799,6.32667865951251,9.98912245857026,6.84566185853339,9.41526687476347,13.1526638481017,15.3779297149725,14.1855314769271,10.0035543914898,16.7054671544004,20.25185311045,19.0080457165129,21.2649559179559,7.28129089550421,6.46756327634615,14.3085696860956,12.8872075468123,19.9486163148612,13.1693286264251,13.7919508109559,20.5826140702038,15.4267769097629,34.4428100522615,27.1217883799581,25.4318281391474,25.5077431671742,22.9807140201719,34.5238323661143,25.6841261737594,27.6793184875677,21.8258891561085,28.7774502638291,24.6693728361362,32.6525034774,36.5659880292113,17.0271046004712,18.8212257464641,11.7889120429611,15.8192749942684,12.6194021971162,27.8100049975478,26.9035429692615,28.9322917745101,27.4701795790732,23.9704808331847,27.3733019306872,14.0804579096834,17.3675053312079,4.14404764057442,14.3954057689914,6.49691533502627,15.7348044052992,17.7013924582007,14.4606617930089,14.7793923461408,18.5197527478545,19.2189201479988,12.269649042575,13.9317240238996,15.0051391209092,25.097285457238,12.6217596423101,7.4083322039652,8.82052268313252,20.2808055714929,6.87979051674338,20.6776467338491,16.3341346783421,29.5172252503473,13.725424823882,20.3038028005957,4.49607013030478,11.3597738825143,15.4622703414744,7.81939932744779,2.07986957055916,18.7630744632855,18.4329343910372,18.5505736892598,11.693682268647,13.4265798647217,23.4012607248556,28.4473583265339,26.613071024941,11.5721992861077,9.59417487070874,13.0795422814081,9.3733833986777,25.0293371016301,15.4534855994201,19.3446409038152,12.7878932946143,6.13412286664338,9.36060152002293,31.9615815468011,35.0384515263905,39.9212270964983,33.5804872914171,12.1280978098043,10.3136874900735,5.86087236050235,17.1072446022705,11.5166791827722,12.0137223137567,25.724378936752,12.446550362335,20.9260833039974,14.740995450011,8.53193324001333,3.57656445851882,7.607724773004,21.5409874433745,18.7213386440459,6.43018435655355,2.83698264046557,8.79193190753128,22.0186110233547,13.0229185293946,9.87888404136923,11.075030265987,25.9436122582058,12.6712299669349,20.7993170171114,15.6876022548053,22.1940040424167,12.162378064119,9.5428847372104,8.43335757932127,20.3681127167845,17.2292903751171,11.4109524032575,13.8990054400876,16.4381058040307,11.997084537073,12.4414509832815,21.2793221018081,16.1720681144638,22.8450604577952,10.1637849688985,18.219579540067,16.2390650683316,20.4369843707906,7.65526501983796,35.2033301255176,47.865833472644,43.5136289107837,26.9921281782108,14.004774589671,25.2276472040754,17.4695523685878,13.20374517099,15.6125390883595,18.5083435688487,12.0378439891088,13.6444502433591,15.5209606938757,15.277188766315,9.77156593271027,23.1979250629781,9.79005787313703,7.20601190002797,25.639235239238,22.8657052867734,22.092604465313,7.27506171471023,9.98612637062982,7.55975733324201,17.6156543551332,21.9450621801929,19.6462066103152,21.6555162242135,16.3746319701345,17.3722234835096,14.8418066444991,12.4909851980151,10.1210183428482,15.932668266679,15.5776328755086,13.8290350367351,35.2909592807537,17.8450758569924,24.7697860237561,16.3036516393742,19.6658461447254,22.4222749580615,4.96319574198153,10.7051318575137,12.5495963068297,2.92278449306521,12.4550922093593,12.5106722477986,9.52524749548488,15.3300300432519,13.880452742126,5.68987518842091,3.01013864312912,7.13653564526107,2.49322802678617,3.80587083027703,28.7230438406174,26.404980553515,13.3354065060522,13.1205858279882,15.6181629438865,29.1606062963054,12.3618777504764,12.4589344880088,12.6338418359158,8.45078319847478,28.9231073719487,20.6875337145141,13.7103269232034,14.27584174953,13.507984103484,18.7985428519479,17.6920366575359,13.7214870139922,26.8876747653147,24.6274523887857,27.09879949848,55.5115299351441,35.8098544228647,6.507837690162,50.0551631460718,6.2733354314454,15.0936454286284,7.45228442443831,6.95946393660058,7.22764454505288,10.7343665056493,13.7698596663077,17.7172477842486,16.9660872592204,3.32667128704734,18.8293154734925,9.86430068570404,11.7742296029885,17.8073733007482,16.4722217841633,19.7924835940753,4.65019707618627,7.92551605865041,16.4290797933203,7.31450608634386,23.152781514972,6.33900880540533,26.7539826359652,20.2209767693809,6.78048699721457,14.8868642757454,17.2494133562717,12.2766247871054,5.78775534266688,18.3650530573057,5.47858017799301,9.60452844109225,5.91560765317707,12.1899649373444,19.8463062846505,5.35006577221875,6.74046021734136,14.9886421061342,25.0264118649525,7.20999030154859,10.1481068871045,8.08265746894301,8.71392958196524,8.71127878890581,25.983689014391,5.16606447205476,8.42357378338128,8.42517291719684,19.9859358180055,37.0436754739484,45.8782324285425,30.7609481074048,28.3495812794769,27.561272296775,46.6900784058756,44.8226092907635,26.9662559940052,26.3855455684859,21.1745568157939,7.84128691139301,8.54694605578306,19.9091513907494,22.2673969680536,13.8700857274075,14.9684528574612,13.596881279398,19.4739696105972,12.3356337304331,19.3750052898287,14.3787847790911,9.87083343370047,27.5697924799074,25.7323502258437,17.1829240360958,14.7313786249465,26.8283129744906,7.90062292938259,22.7358165588259,21.2492302497795,19.1876512968695,17.3895404907816,8.90899756464776,11.0778659052941,21.6364542780786,30.3095490878016,8.45922030527097,15.345524313474,23.1482923249593,12.3787732184504,15.9364039516794,11.6495820190629,16.7121139316383,21.38145701995,20.2726063385493,21.8712482508586,19.1310406318297,25.0444586301538,6.42735109484362,15.6232802014715,19.3270548603538,24.0367006512098,17.383359601945,19.7378557229159,11.4468869078795,13.0636626817959,21.5684042753584,46.3664842409828,12.7893092556718,18.8408904766543,21.5534783112246,13.3364388173564,10.6626602070474,13.4513742334684,17.9652418201075,19.7925098424777,29.1241799987332,12.3249927823915,19.8000600016769,22.1200675754707,13.7104855425403,9.65281445076101,6.12369688104834,26.738249219727,12.4003794013937,21.8279553911988,28.9905299002458,35.6065216978543,10.6397142823277,11.8468114463145,15.4692618196966,29.4184100427853,27.9329438368783,13.3312205340991,22.3646987256418,17.5027406599056,26.1840166332039,26.4770962577493,19.1438970209892,25.5856692488945,9.19739683761629,13.5003020499721,9.30785418640876,13.761335297648,13.1361897992885,13.0900837841157,9.48768663620925,13.5096092133322,32.9156980663722,10.6101325303446,18.6586054292802,20.3405321357566,20.9005005526486,20.2567822712647,21.9970852176105,13.0469296619474,19.646666292494,13.3660095366983,23.994803341121,18.4592858878721,13.118808960619,20.4349363921546,39.9155822621463,14.3240423925115,24.4642329766622,29.0377718516793,25.7101119769612,18.4504812515185,23.4504534286608,16.4864224321623,23.9275394174587,26.1483645141644,25.4285663909852,33.4522803364285,24.1918114125324,20.2465022599182,16.8352946185077,18.7165479061461,13.842413846284,19.3946601748653,7.39539939627951,20.7058548958642,21.7075271745971,16.094629582429,21.7255396934059,38.6561834908771,20.3382666702479,16.4450309576101,10.3331598085555,18.9932387867636,25.4216797555244,15.2301758477914,19.8511285107598,12.1883861845099,12.3917758752531,22.9073192331831,19.390234758402,21.3201101022462,11.1827282008889,40.303679919472,12.2313785466253,13.5983700206033,25.3975561914441,15.025430674879,11.407985485486,20.6727122126909,30.6591811360734,12.4631978011788,9.46394475405532,25.9732633183196,24.0618445212268,31.5864130813798,18.3704680459072,18.027494021736,8.03417246790741,34.7338552756375,24.8606919644258,25.6291088960398,21.0351096760287,22.4171134796773,19.7492383492762,18.6027940062875,11.5155731609467,13.5189047267582,23.8355960695257,16.0753148465019,20.2182971797934,25.7573009578095,9.89885122826602,24.7616625458544,18.0426183274333,26.8347750079413,15.918752874438,38.1869401622786,13.3056424014452,19.0044579692815,31.6660075577085,19.2967738120809,7.28301167401975,13.9847695710112,14.6609892473502,16.4202083328241,12.4103196841575,14.3676229874985,11.9034155086541,15.1645339389025,24.5887238598673,13.1897010310274,10.6005511129777,12.1525978979858,17.5869360317778,14.542381220168,19.0300056025501,17.7267104862373,62.095700514368,19.8834746566654,13.8926486107346,9.09013506730544,7.67293369799644,29.3636978574284,16.8645519044537,13.7879441712485,14.0918965311192,14.0985231205216,17.9041669725267,12.4049545195378,12.8127578147061,21.1572672893985,12.6150023051816,22.9623136681284,18.939402897122,30.8517455907795,15.3725901793391,11.0703855805403,17.413385346243,22.8207845107227,34.6567830297092,23.0424435491212,12.0896390338368,10.9845255628196,16.0893699835758,12.1217923376057,14.5909383016494,22.2452805399134,13.2727239670216,13.4595522149283,14.7665340553641,13.1591083490774,12.7437413730962,25.6387773933255,18.3210289113986,14.5147172744299,17.0138697317117,18.2610771634107,19.3832315606412,15.6130136989206,11.7992512629352,16.5482279874329,12.8892668450986,15.3131140759903,20.3028903236294,11.2007774105683,19.2301594902364,16.1639754607641,13.8803388051516,10.4014708419944,25.5185493736162,25.8384349045559,7.48129554190499,15.0489608310492,27.1657742002179,20.2370390422081,15.4400723580486,12.2799067764076,11.838172778374,13.503982678964,13.5153952522458,30.4927407119657,17.2715170865599,22.7894967133037,20.047473242001,12.4710597657209,10.8949169056958,8.34183510704806,16.3804924423206,15.729466160238,32.7533791205872,10.3993445844564,13.1230827523793,5.5108793491461,17.5929945605719,9.57350941309572,19.0236130498444,27.9934767014838,32.9967477963421,21.349312656543,19.1864449064194,33.5273589249483,20.537636124437,15.3053942473212,19.0861076958863,22.3457967189298,17.490239285938,33.6739651155352,14.4102734691385,20.8078806777504,19.2934650732516,21.7737073076998,17.0035891590702,21.5505709727154,12.3069818544453,17.897090431742,18.1883573980893,18.8926505389266,9.99385941814081,19.335100544702,55.5637396967857,18.3428598521679,34.4266485128008,19.0691047733584,14.4975584472621,30.2352657616738,21.2845229228398,15.7329953588746,9.37816813479711,25.9287627536608,12.9379814832976,31.4933463642306,18.5052981854401,18.7458743667323,21.288740039622,17.9466742848756,24.0668915968017,18.092506306287,16.871180065236,15.300798259287,28.6187837912693,14.999651404592,27.2389814997247,23.6716585652286,26.1811520053992,33.2633888109896,16.0175242702533,17.1488009437418,15.9049175165786,14.8646468252039,17.0199130872914,15.5723962648897,28.0220341476335,19.6394487395002,19.3387792686514,18.2631744101899,9.71674160483796,11.9437921971763,25.7315559035963,12.6410889386181,22.4345950960482,11.4746459719702,21.6462068477168,20.7216164163037,30.3878889227231,25.5766074871214,33.9879613468019,5.67993603506714,10.0551817615806,26.6733841620285,46.7378011829862,10.8572234982512,9.55538938977433,39.9323891518119,23.7523565348888,28.8945482207979,18.1280074412611,10.0609550719122,9.27851545070559,34.971191500258,29.2424329327632,17.308717439039,7.13520544665411,19.765564356818,6.15666893774403,25.5127205627678,26.1620395985932,27.5385046234986,12.6985670017611,19.8570140620663,24.9817139927723,10.600657224207,18.7139232206064,20.2874749240032,16.6528572394061,22.462156397185,40.092806319565,10.1939979043428,28.5686301769052,23.2910615332357,10.511619036281,20.4494188709025,22.936464170227,22.7909937210808,5.67977623895465,14.2102214499012,13.5268714005517,37.031878836078,24.1796761808388,27.2683620892537,17.7376890470754,14.1306395815288,13.8767276393893,17.2309961375554,17.6440675453628,10.1542614000913,9.37327975255418,5.51556586443225,14.8526248507749,20.0973097617134,12.4375415918817,22.7552590896169,14.4999107692667,27.6154740497939,25.9647417540745,41.5900585782248,15.2499333109634,19.3487361165621,25.8710001866521,15.0224556048903,16.7694317531788,23.3038103430473,19.8670508937713,28.9414510195032,11.8034739485913,10.5660072418938,5.7921684686082,26.1391338130168,37.5425507845527,46.9407145662207,24.0068745206286,35.2851090318322,20.7312007398757,14.4255821536455 | |||
|short_description=p1@TUG1 | |||
}} |
Revision as of 15:20, 21 January 2014
Short description: | p1@TUG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TUG1_5end |
Coexpression cluster: | NA |
Association with transcript: | -330bp_to_NR_002323, uc003ajf.1, uc003ajg.2, uc003ajh.2, uc003aji.2_5end |
EntrezGene: | TUG1 |
HGNC: | 26066 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.41e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.41e-14 | 42 |
myeloid leukocyte | 6.79e-11 | 72 |
myeloid lineage restricted progenitor cell | 2.39e-10 | 66 |
granulocyte monocyte progenitor cell | 9.30e-10 | 67 |
defensive cell | 1.34e-09 | 48 |
phagocyte | 1.34e-09 | 48 |
monopoietic cell | 1.08e-08 | 59 |
monocyte | 1.08e-08 | 59 |
monoblast | 1.08e-08 | 59 |
promonocyte | 1.08e-08 | 59 |
macrophage dendritic cell progenitor | 2.18e-08 | 61 |
hematopoietic lineage restricted progenitor cell | 3.38e-07 | 120 |
leukocyte | 4.17e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.02e-10 | 98 |
blood island | 9.02e-10 | 98 |
hemolymphoid system | 9.12e-09 | 108 |