FFCP PHASE1:Mm9::chr10:100051839..100051903,-: Difference between revisions
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{{FFCP|EntrezGene=68281|HGNC=|MCL_coexpression_id=1|UniProt=Q8BHN7|association_with_transcript=0bp_to_ENSMUST00000054471,NM_175128,uc007gxx.2,uc007gxy.2_5end|description=CAGE_peak_1_at_4930430F08Rik_5end|id=chr10:100051839..100051903,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.09e-12!63;UBERON:0002346!5.21e-12!71;UBERON:0003075!5.21e-12!71;UBERON:0007284!5.21e-12!71;UBERON:0000955!8.31e-11!50;UBERON:0006238!8.31e-11!50;UBERON:0004121!1.14e-10!102;UBERON:0000924!1.14e-10!102;UBERON:0006601!1.14e-10!102;UBERON:0001049!1.40e-10!52;UBERON:0005068!1.40e-10!52;UBERON:0006241!1.40e-10!52;UBERON:0007135!1.40e-10!52;UBERON:0002616!2.39e-10!49;UBERON:0000475!5.26e-10!200;UBERON:0003056!9.58e-10!49;UBERON:0000073!8.15e-09!75;UBERON:0001016!8.15e-09!75;UBERON:0001017!2.80e-08!73;UBERON:0005743!2.80e-08!73;UBERON:0003080!3.33e-08!40;UBERON:0007811!5.65e-08!86;UBERON:0000153!5.79e-08!94;UBERON:0000025!8.78e-08!114;UBERON:0002780!1.16e-07!39;UBERON:0001890!1.16e-07!39;UBERON:0006240!1.16e-07!39;UBERON:0002020!1.78e-07!34;UBERON:0004111!1.85e-07!122;UBERON:0000468!2.77e-07!333;UBERON:0002021!5.09e-07!10;UBERON:0000411!5.09e-07!10;UBERON:0001950!5.09e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.87e-12,73;UBERON:0002346,8.91e-12,64;UBERON:0003075,8.91e-12,64;UBERON:0007284,8.91e-12,64;UBERON:0000073,2.25e-11,54;UBERON:0001049,1.40e-10,52;UBERON:0005068,1.40e-10,52;UBERON:0006241,1.40e-10,52;UBERON:0007135,1.40e-10,52;UBERON:0004121,3.26e-10,95;UBERON:0000924,3.26e-10,95;UBERON:0006601,3.26e-10,95;UBERON:0010314,3.34e-10,92;UBERON:0003056,9.58e-10,49;UBERON:0000955,1.71e-09,47;UBERON:0006238,1.71e-09,47;UBERON:0002616,4.73e-09,46;UBERON:0001016,8.26e-09,75;UBERON:0001017,2.84e-08,73;UBERON:0003080,3.33e-08,40;UBERON:0000025,8.78e-08,114;UBERON:0002780,1.16e-07,39;UBERON:0001890,1.16e-07,39;UBERON:0006240,1.16e-07,39;UBERON:0002020,1.78e-07,34;UBERON:0004111,1.85e-07,122;UBERON:0002021,5.09e-07,10;UBERON:0000411,5.09e-07,10;UBERON:0001950,5.09e-07,10|phase1_expression=17.9366708757369,2.09385244583617,2.27499619694768,3.32710632437513,1.50268718983904,3.86122325397347,1.63528848416868,7.36002943616985,0.422366166455,0.936258105287974,3.76679530096111,2.87179772383211,6.67682846731702,7.86783621770977,20.3196954707554,20.8549525411521,20.2872944657163,6.30924330716475,5.89592064504677,4.2438965179803,12.4163203620562,5.85816612085223,6.26879493933445,3.19984845586813,3.89995777814189,1.72269589234506,3.87685796543167,3.878482188346,3.42042155021473,4.78857246543868,2.43903561720835,6.98533740805594,7.38077745101484,0,4.04392267651784,5.31950865147176,2.45003227514843,1.67412652294763,3.1253413780952,2.61761871986899,0,1.36609096991689,1.45653105909346,18.1291417884831,16.8285705824394,13.3989129078028,3.12956537739216,5.23260375313072,4.61340983742391,5.44403717407994,4.61955191363696,4.31257693094915,3.18786951509699,0.725362142011344,3.36093799142464,5.65970759279083,8.30946975822394,8.25075347643908,8.29497489524351,9.52183762689659,5.07065122804943,2.37191172448392,0,2.2497492932035,1.97773272513395,2.1314403448383,0.898800331555214,1.53687322128622,9.02099627083756,9.99043943654511,5.8890989178387,13.139945282575,8.83474163806454,7.83941114975706,8.4344014496048,5.51531271966013,16.5173821499083,20.1745994174597,21.3513081226178,10.0233578674947,9.33173964744578,10.4182674111352,21.4970909231063,22.5105044012672,21.2389564409766,12.6690291753677,14.6642831223076,12.6751623161204,12.6462742866417,13.8295954995417,8.11620568364698,12.0459342777394,3.39985666853875,9.71465744948071,11.0461990966104,9.40856462904405,10.3928870897496,15.5091593546033,10.1316541795119,12.3668851078619,12.2533775205712,3.84979432242953,12.7402619853323,21.3320010945999,5.84525810730278,8.61423542615335,6.57181778519218,9.7056297761201,12.4290184150642,10.0940654564081,9.02123699183906,8.8294988710521,9.91646638201052,10.5505848386836,9.99504010653491,12.6923257242972,4.6967043869531,18.3641183288288,11.4999371753484,11.9707468961083,16.1214308476087,13.5765070877862,7.45567044872489,29.5708604981663,29.3225389538837,3.83185582812887,4.79260498023681,4.19931911695385,4.57452817463033,31.4560342750128,27.9075367719362,19.476424577494,26.421296669226,27.105838477015,22.648896856992,31.474805035145,8.04530974417499,13.43595282589,9.35074206204597,14.9413717679397,10.1493945510909,8.73627996847197,16.2055916824814,11.1521565198429,10.4095843701532,13.0675994690547,10.1197862524507,20.1788629176432,6.46703978798527,10.2117283290622,6.51019159406611,8.98702502953057,7.22922847986555,12.8853301613202,13.1700567301084,8.7575077400137,5.61770549850588,7.97778512055617,4.83077948972507,9.94203708170409,10.5536726991493,7.74266864282364,9.2330446878232,9.64144735562279,9.2560267732427,8.37122201101468,8.04820204198858,6.30532848782715,7.07607354627966,7.55170334763838,8.02581214503972,8.18719929581861,9.4406549575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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:68281 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BHN7 | |||
|association_with_transcript=0bp_to_ENSMUST00000054471,NM_175128,uc007gxx.2,uc007gxy.2_5end | |||
|cluster_id=chr10:100051839..100051903,- | |||
|description=CAGE_peak_1_at_4930430F08Rik_5end | |||
|id=chr10:100051839..100051903,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.09e-12!63;UBERON:0002346!5.21e-12!71;UBERON:0003075!5.21e-12!71;UBERON:0007284!5.21e-12!71;UBERON:0000955!8.31e-11!50;UBERON:0006238!8.31e-11!50;UBERON:0004121!1.14e-10!102;UBERON:0000924!1.14e-10!102;UBERON:0006601!1.14e-10!102;UBERON:0001049!1.40e-10!52;UBERON:0005068!1.40e-10!52;UBERON:0006241!1.40e-10!52;UBERON:0007135!1.40e-10!52;UBERON:0002616!2.39e-10!49;UBERON:0000475!5.26e-10!200;UBERON:0003056!9.58e-10!49;UBERON:0000073!8.15e-09!75;UBERON:0001016!8.15e-09!75;UBERON:0001017!2.80e-08!73;UBERON:0005743!2.80e-08!73;UBERON:0003080!3.33e-08!40;UBERON:0007811!5.65e-08!86;UBERON:0000153!5.79e-08!94;UBERON:0000025!8.78e-08!114;UBERON:0002780!1.16e-07!39;UBERON:0001890!1.16e-07!39;UBERON:0006240!1.16e-07!39;UBERON:0002020!1.78e-07!34;UBERON:0004111!1.85e-07!122;UBERON:0000468!2.77e-07!333;UBERON:0002021!5.09e-07!10;UBERON:0000411!5.09e-07!10;UBERON:0001950!5.09e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.87e-12,73;UBERON:0002346,8.91e-12,64;UBERON:0003075,8.91e-12,64;UBERON:0007284,8.91e-12,64;UBERON:0000073,2.25e-11,54;UBERON:0001049,1.40e-10,52;UBERON:0005068,1.40e-10,52;UBERON:0006241,1.40e-10,52;UBERON:0007135,1.40e-10,52;UBERON:0004121,3.26e-10,95;UBERON:0000924,3.26e-10,95;UBERON:0006601,3.26e-10,95;UBERON:0010314,3.34e-10,92;UBERON:0003056,9.58e-10,49;UBERON:0000955,1.71e-09,47;UBERON:0006238,1.71e-09,47;UBERON:0002616,4.73e-09,46;UBERON:0001016,8.26e-09,75;UBERON:0001017,2.84e-08,73;UBERON:0003080,3.33e-08,40;UBERON:0000025,8.78e-08,114;UBERON:0002780,1.16e-07,39;UBERON:0001890,1.16e-07,39;UBERON:0006240,1.16e-07,39;UBERON:0002020,1.78e-07,34;UBERON:0004111,1.85e-07,122;UBERON:0002021,5.09e-07,10;UBERON:0000411,5.09e-07,10;UBERON:0001950,5.09e-07,10 | |||
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| |||
|short_description=p1@4930430F08Rik | |||
}} |
Revision as of 19:15, 3 August 2015
Short description: | p1@4930430F08Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_4930430F08Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000054471, NM_175128, uc007gxx.2, uc007gxy.2_5end |
EntrezGene: | 68281 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 1.87e-12 | 73 |
neurectoderm | 8.91e-12 | 64 |
neural plate | 8.91e-12 | 64 |
presumptive neural plate | 8.91e-12 | 64 |
regional part of nervous system | 2.25e-11 | 54 |
neural tube | 1.40e-10 | 52 |
neural rod | 1.40e-10 | 52 |
future spinal cord | 1.40e-10 | 52 |
neural keel | 1.40e-10 | 52 |
ectoderm-derived structure | 3.26e-10 | 95 |
ectoderm | 3.26e-10 | 95 |
presumptive ectoderm | 3.26e-10 | 95 |
structure with developmental contribution from neural crest | 3.34e-10 | 92 |
pre-chordal neural plate | 9.58e-10 | 49 |
brain | 1.71e-09 | 47 |
future brain | 1.71e-09 | 47 |
regional part of brain | 4.73e-09 | 46 |
nervous system | 8.26e-09 | 75 |
central nervous system | 2.84e-08 | 73 |
anterior neural tube | 3.33e-08 | 40 |
tube | 8.78e-08 | 114 |
regional part of forebrain | 1.16e-07 | 39 |
forebrain | 1.16e-07 | 39 |
future forebrain | 1.16e-07 | 39 |
gray matter | 1.78e-07 | 34 |
anatomical conduit | 1.85e-07 | 122 |
occipital lobe | 5.09e-07 | 10 |
visual cortex | 5.09e-07 | 10 |
neocortex | 5.09e-07 | 10 |