FFCP PHASE1:Mm9::chr10:84218931..84218942,+: Difference between revisions
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{{FFCP|EntrezGene=71137|HGNC=|MCL_coexpression_id=2593|UniProt=Q7TNK1|association_with_transcript=124bp_to_ENSMUST00000060397_5end|description=CAGE_peak_4_at_Rfx4_5end|id=chr10:84218931..84218942,+|ontology_enrichment_celltype=CL:0000117!6.55e-19!23;CL:0000337!6.55e-19!23;CL:0002319!2.78e-18!43;CL:0000221!1.30e-17!44;CL:0000133!1.30e-17!44;CL:0000055!3.45e-14!50;CL:0000540!4.41e-14!33;CL:0000047!4.41e-14!33;CL:0000031!4.41e-14!33;CL:0000404!4.41e-14!33;CL:0000393!1.15e-10!39;CL:0000211!1.15e-10!39;CL:0002321!2.63e-07!70;CL:0000220!2.63e-07!70;CL:0002453!5.97e-07!8|ontology_enrichment_celltype_v019_2=CL:0000117,3.60e-20,23;CL:0000337,3.60e-20,23;CL:0002319,2.99e-19,43;CL:0000221,1.09e-18,44;CL:0000133,1.09e-18,44;CL:0000540,6.97e-13,33;CL:0000047,6.97e-13,33;CL:0000031,6.97e-13,33;CL:0000404,6.97e-13,33;CL:0000393,2.54e-10,39;CL:0000211,2.54e-10,39;CL:0002321,9.46e-10,70;CL:0002453,1.08e-09,8;CL:0000128,4.35e-09,6;CL:0000126,4.35e-09,6;CL:0000127,4.35e-09,6;CL:0002612,8.39e-08,3;CL:0000333,1.35e-07,10;CL:0000095,1.35e-07,10;CL:0000243,1.35e-07,10;CL:0000123,1.35e-07,10;CL:0000125,1.35e-07,10;CL:0000030,1.35e-07,10;CL:0000339,1.35e-07,10;CL:0002613,2.08e-07,3;CL:0000120,3.24e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.70e-46!73;UBERON:0005743!1.70e-46!73;UBERON:0000073!1.10e-44!75;UBERON:0001016!1.10e-44!75;UBERON:0001049!9.59e-42!52;UBERON:0005068!9.59e-42!52;UBERON:0006241!9.59e-42!52;UBERON:0007135!9.59e-42!52;UBERON:0000955!1.41e-36!50;UBERON:0006238!1.41e-36!50;UBERON:0002616!1.32e-35!49;UBERON:0003080!2.06e-30!40;UBERON:0002020!3.05e-29!34;UBERON:0002780!3.07e-29!39;UBERON:0001890!3.07e-29!39;UBERON:0006240!3.07e-29!39;UBERON:0004121!3.24e-28!102;UBERON:0000924!3.24e-28!102;UBERON:0006601!3.24e-28!102;UBERON:0002346!4.46e-28!71;UBERON:0003075!4.46e-28!71;UBERON:0007284!4.46e-28!71;UBERON:0000033!9.98e-27!63;UBERON:0002791!6.63e-24!29;UBERON:0003528!6.63e-24!29;UBERON:0001893!6.63e-24!29;UBERON:0003056!1.87e-23!49;UBERON:0000956!4.67e-17!21;UBERON:0001869!4.67e-17!21;UBERON:0000203!4.67e-17!21;UBERON:0007811!2.30e-15!86;UBERON:0002619!3.12e-14!17;UBERON:0000153!1.85e-13!94;UBERON:0003076!3.74e-11!12;UBERON:0003057!3.74e-11!12;UBERON:0000025!4.27e-10!114;UBERON:0002021!9.85e-09!10;UBERON:0000411!9.85e-09!10;UBERON:0001950!9.85e-09!10;UBERON:0004111!1.71e-08!122;UBERON:0002420!5.98e-08!8;UBERON:0007245!5.98e-08!8;UBERON:0010009!5.98e-08!8;UBERON:0010011!5.98e-08!8;UBERON:0000454!5.98e-08!8;UBERON:0002240!1.23e-07!6;UBERON:0005174!1.23e-07!6;UBERON:0001137!1.23e-07!6;UBERON:0001954!6.13e-07!7;UBERON:0003022!6.13e-07!7;UBERON:0002421!6.13e-07!7;UBERON:0000349!6.13e-07!7;UBERON:0002600!6.13e-07!7|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.08e-39,73;UBERON:0001016,3.91e-38,75;UBERON:0000073,5.33e-33,54;UBERON:0001049,1.28e-32,52;UBERON:0005068,1.28e-32,52;UBERON:0006241,1.28e-32,52;UBERON:0007135,1.28e-32,52;UBERON:0004121,2.46e-28,95;UBERON:0000924,2.46e-28,95;UBERON:0006601,2.46e-28,95;UBERON:0002346,4.04e-25,64;UBERON:0003075,4.04e-25,64;UBERON:0007284,4.04e-25,64;UBERON:0000955,5.51e-24,47;UBERON:0006238,5.51e-24,47;UBERON:0002616,1.33e-22,46;UBERON:0002020,4.48e-22,34;UBERON:0010371,4.08e-21,73;UBERON:0003076,1.11e-20,12;UBERON:0003057,1.11e-20,12;UBERON:0003080,6.61e-16,40;UBERON:0010314,3.05e-15,92;UBERON:0002780,1.87e-14,39;UBERON:0001890,1.87e-14,39;UBERON:0006240,1.87e-14,39;UBERON:0003528,2.70e-14,29;UBERON:0002791,2.70e-14,29;UBERON:0001893,2.70e-14,29;UBERON:0002240,2.42e-13,6;UBERON:0005174,2.42e-13,6;UBERON:0001137,2.42e-13,6;UBERON:0003056,4.15e-12,49;UBERON:0001948,4.09e-11,5;UBERON:0002315,4.09e-11,5;UBERON:0000025,6.70e-11,114;UBERON:0004111,1.03e-09,122;UBERON:0011216,1.76e-09,194;UBERON:0000956,2.89e-09,21;UBERON:0001869,2.89e-09,21;UBERON:0000203,2.89e-09,21;UBERON:0004733,4.53e-09,6;UBERON:0004732,4.53e-09,6;UBERON:0002028,4.53e-09,6;UBERON:0007277,4.53e-09,6;UBERON:0002619,4.18e-08,17;UBERON:0002257,8.39e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,1.09843091367236,2.3331587888914,1.53985063787899,7.18762821824858,0,0,0,0,0,0,2.42779753031517,2.11596391708813,1.26766280701236,0,0,0,0,0,0.898800331555214,3.84218305321555,0.829516898467821,1.08004750665353,0.420649922702764,1.71390590642282,1.10434270475807,0.367472397644862,0.383381884072945,0.919218786610021,0,1.53224805702225,1.0752457327937,1.58263545276233,2.65314166446988,2.08365348222704,0.558365998002762,1.68828783009504,1.06958773443767,1.76777151284201,3.41692033917847,2.98239113320481,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34224637609238,1.8850203613211,0,0,0,0,2.54644086988199,0.915001205637253,0.376963056338593,1.04294592115366,0.767146371990992,1.66230435647648,1.29793010454206,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:71137 | |||
|HGNC= | |||
|MCL_coexpression_id=2593 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q7TNK1 | |||
|association_with_transcript=124bp_to_ENSMUST00000060397_5end | |||
|cluster_id=chr10:84218931..84218942,+ | |||
|description=CAGE_peak_4_at_Rfx4_5end | |||
|id=chr10:84218931..84218942,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.55e-19!23;CL:0000337!6.55e-19!23;CL:0002319!2.78e-18!43;CL:0000221!1.30e-17!44;CL:0000133!1.30e-17!44;CL:0000055!3.45e-14!50;CL:0000540!4.41e-14!33;CL:0000047!4.41e-14!33;CL:0000031!4.41e-14!33;CL:0000404!4.41e-14!33;CL:0000393!1.15e-10!39;CL:0000211!1.15e-10!39;CL:0002321!2.63e-07!70;CL:0000220!2.63e-07!70;CL:0002453!5.97e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.60e-20,23;CL:0000337,3.60e-20,23;CL:0002319,2.99e-19,43;CL:0000221,1.09e-18,44;CL:0000133,1.09e-18,44;CL:0000540,6.97e-13,33;CL:0000047,6.97e-13,33;CL:0000031,6.97e-13,33;CL:0000404,6.97e-13,33;CL:0000393,2.54e-10,39;CL:0000211,2.54e-10,39;CL:0002321,9.46e-10,70;CL:0002453,1.08e-09,8;CL:0000128,4.35e-09,6;CL:0000126,4.35e-09,6;CL:0000127,4.35e-09,6;CL:0002612,8.39e-08,3;CL:0000333,1.35e-07,10;CL:0000095,1.35e-07,10;CL:0000243,1.35e-07,10;CL:0000123,1.35e-07,10;CL:0000125,1.35e-07,10;CL:0000030,1.35e-07,10;CL:0000339,1.35e-07,10;CL:0002613,2.08e-07,3;CL:0000120,3.24e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.70e-46!73;UBERON:0005743!1.70e-46!73;UBERON:0000073!1.10e-44!75;UBERON:0001016!1.10e-44!75;UBERON:0001049!9.59e-42!52;UBERON:0005068!9.59e-42!52;UBERON:0006241!9.59e-42!52;UBERON:0007135!9.59e-42!52;UBERON:0000955!1.41e-36!50;UBERON:0006238!1.41e-36!50;UBERON:0002616!1.32e-35!49;UBERON:0003080!2.06e-30!40;UBERON:0002020!3.05e-29!34;UBERON:0002780!3.07e-29!39;UBERON:0001890!3.07e-29!39;UBERON:0006240!3.07e-29!39;UBERON:0004121!3.24e-28!102;UBERON:0000924!3.24e-28!102;UBERON:0006601!3.24e-28!102;UBERON:0002346!4.46e-28!71;UBERON:0003075!4.46e-28!71;UBERON:0007284!4.46e-28!71;UBERON:0000033!9.98e-27!63;UBERON:0002791!6.63e-24!29;UBERON:0003528!6.63e-24!29;UBERON:0001893!6.63e-24!29;UBERON:0003056!1.87e-23!49;UBERON:0000956!4.67e-17!21;UBERON:0001869!4.67e-17!21;UBERON:0000203!4.67e-17!21;UBERON:0007811!2.30e-15!86;UBERON:0002619!3.12e-14!17;UBERON:0000153!1.85e-13!94;UBERON:0003076!3.74e-11!12;UBERON:0003057!3.74e-11!12;UBERON:0000025!4.27e-10!114;UBERON:0002021!9.85e-09!10;UBERON:0000411!9.85e-09!10;UBERON:0001950!9.85e-09!10;UBERON:0004111!1.71e-08!122;UBERON:0002420!5.98e-08!8;UBERON:0007245!5.98e-08!8;UBERON:0010009!5.98e-08!8;UBERON:0010011!5.98e-08!8;UBERON:0000454!5.98e-08!8;UBERON:0002240!1.23e-07!6;UBERON:0005174!1.23e-07!6;UBERON:0001137!1.23e-07!6;UBERON:0001954!6.13e-07!7;UBERON:0003022!6.13e-07!7;UBERON:0002421!6.13e-07!7;UBERON:0000349!6.13e-07!7;UBERON:0002600!6.13e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.08e-39,73;UBERON:0001016,3.91e-38,75;UBERON:0000073,5.33e-33,54;UBERON:0001049,1.28e-32,52;UBERON:0005068,1.28e-32,52;UBERON:0006241,1.28e-32,52;UBERON:0007135,1.28e-32,52;UBERON:0004121,2.46e-28,95;UBERON:0000924,2.46e-28,95;UBERON:0006601,2.46e-28,95;UBERON:0002346,4.04e-25,64;UBERON:0003075,4.04e-25,64;UBERON:0007284,4.04e-25,64;UBERON:0000955,5.51e-24,47;UBERON:0006238,5.51e-24,47;UBERON:0002616,1.33e-22,46;UBERON:0002020,4.48e-22,34;UBERON:0010371,4.08e-21,73;UBERON:0003076,1.11e-20,12;UBERON:0003057,1.11e-20,12;UBERON:0003080,6.61e-16,40;UBERON:0010314,3.05e-15,92;UBERON:0002780,1.87e-14,39;UBERON:0001890,1.87e-14,39;UBERON:0006240,1.87e-14,39;UBERON:0003528,2.70e-14,29;UBERON:0002791,2.70e-14,29;UBERON:0001893,2.70e-14,29;UBERON:0002240,2.42e-13,6;UBERON:0005174,2.42e-13,6;UBERON:0001137,2.42e-13,6;UBERON:0003056,4.15e-12,49;UBERON:0001948,4.09e-11,5;UBERON:0002315,4.09e-11,5;UBERON:0000025,6.70e-11,114;UBERON:0004111,1.03e-09,122;UBERON:0011216,1.76e-09,194;UBERON:0000956,2.89e-09,21;UBERON:0001869,2.89e-09,21;UBERON:0000203,2.89e-09,21;UBERON:0004733,4.53e-09,6;UBERON:0004732,4.53e-09,6;UBERON:0002028,4.53e-09,6;UBERON:0007277,4.53e-09,6;UBERON:0002619,4.18e-08,17;UBERON:0002257,8.39e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,1.09843091367236,2.3331587888914,1.53985063787899,7.18762821824858,0,0,0,0,0,0,2.42779753031517,2.11596391708813,1.26766280701236,0,0,0,0,0,0.898800331555214,3.84218305321555,0.829516898467821,1.08004750665353,0.420649922702764,1.71390590642282,1.10434270475807,0.367472397644862,0.383381884072945,0.919218786610021,0,1.53224805702225,1.0752457327937,1.58263545276233,2.65314166446988,2.08365348222704,0.558365998002762,1.68828783009504,1.06958773443767,1.76777151284201,3.41692033917847,2.98239113320481,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34224637609238,1.8850203613211,0,0,0,0,2.54644086988199,0.915001205637253,0.376963056338593,1.04294592115366,0.767146371990992,1.66230435647648,1.29793010454206,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,2.05809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.28932855251423,0,0,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,0.18006109403131,0,0.428674070063185,0.709360934569094,0.178368817602071,0.493647061806363,0.913394847343798,0,0,0,0,0,0,0,0,0,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,1.03111909406213,1.37016503954128,0.755393897389701,1.35004500046361,1.35096360967266,0.453142408984205,0.51776031175182,4.4628559461196,2.79317411380722,2.21953687480374,0.243106717068294,0.628839487883947,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.565879024158229,0.561849044819294,0.128050304809739,0.114870937911227,0.952587382566147,0.115884325944855,0,0,0.735994600671987,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0.338458431566706,0.365855945745545,0.263069711437843,0,0,0.237270036248348,0.197008964751127,0,0,0,0.499621155875892,0,0.214871054048298,0.382576664137687,0.220591419119515,0 | |||
|short_description=p4@Rfx4 | |||
}} |
Revision as of 22:36, 4 August 2015
Short description: | p4@Rfx4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rfx4_5end |
Coexpression cluster: | MCL_coexpression_mm9:2593 |
Association with transcript: | 124bp_to_ENSMUST00000060397_5end |
EntrezGene: | 71137 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.60e-20 | 23 |
neuroblast (sensu Vertebrata) | 3.60e-20 | 23 |
neural cell | 2.99e-19 | 43 |
ectodermal cell | 1.09e-18 | 44 |
neurectodermal cell | 1.09e-18 | 44 |
neuron | 6.97e-13 | 33 |
neuronal stem cell | 6.97e-13 | 33 |
neuroblast | 6.97e-13 | 33 |
electrically signaling cell | 6.97e-13 | 33 |
electrically responsive cell | 2.54e-10 | 39 |
electrically active cell | 2.54e-10 | 39 |
embryonic cell | 9.46e-10 | 70 |
oligodendrocyte precursor cell | 1.08e-09 | 8 |
oligodendrocyte | 4.35e-09 | 6 |
macroglial cell | 4.35e-09 | 6 |
astrocyte | 4.35e-09 | 6 |
neuron of the ventral spinal cord | 8.39e-08 | 3 |
migratory neural crest cell | 1.35e-07 | 10 |
neuron associated cell | 1.35e-07 | 10 |
glial cell (sensu Vertebrata) | 1.35e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.35e-07 | 10 |
glial cell | 1.35e-07 | 10 |
glioblast | 1.35e-07 | 10 |
glioblast (sensu Vertebrata) | 1.35e-07 | 10 |
striatum neuron | 2.08e-07 | 3 |
granule cell | 3.24e-07 | 3 |