FFCP PHASE1:Hg19::chr2:67625218..67625244,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:67625218..67625244,- | |||
|id=chr2:67625218..67625244,- | |||
|ontology_enrichment_celltype=CL:0002139!4.02e-15!24;CL:0000222!3.64e-13!119;CL:0000071!1.00e-11!18;CL:0002546!1.00e-11!18;CL:0000213!2.62e-09!57;CL:0000215!2.62e-09!57;CL:0000220!1.13e-08!246;CL:0002321!1.69e-08!248;CL:0000115!3.80e-08!35;CL:0000076!1.57e-07!62;CL:0000359!2.38e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.25e-23;24!CL:0000115;8.31e-17;36!CL:0000071;9.12e-16;18!CL:1000413;1.70e-12;9!CL:0000359;3.44e-12;32!CL:0002078;8.77e-11;45!CL:0000213;2.28e-10;58!CL:0000215;2.28e-10;58!CL:0002138;2.83e-09;6!CL:0002544;1.78e-08;6!CL:0002593;3.81e-08;2!CL:0000192;7.05e-08;43!CL:0002545;3.57e-07;2!CL:0002589;3.57e-07;2!CL:0000076;7.08e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.05e-23,121;CL:0002139,4.76e-23,24;CL:0000115,8.18e-19,36;CL:0000213,6.38e-17,58;CL:0000215,6.38e-17,58;CL:0000071,9.17e-16,18;CL:0002546,9.17e-16,18;CL:0002078,2.91e-14,45;CL:1000413,1.92e-12,9;CL:0000359,2.72e-12,32;CL:0002321,1.23e-10,250;CL:0000192,6.15e-10,43;CL:0000514,6.15e-10,43;CL:0000680,4.37e-09,58;CL:0000056,4.37e-09,58;CL:0000355,4.37e-09,58;CL:0005020,4.43e-09,6;CL:0002138,4.43e-09,6;CL:0005022,4.43e-09,6;CL:0000076,5.05e-09,63;CL:0000187,1.79e-08,55;CL:0002544,2.08e-08,6;CL:0002593,3.72e-08,2;CL:0000393,2.45e-07,61;CL:0000211,2.45e-07,61;CL:0002545,3.60e-07,2;CL:0002595,7.34e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;9.12e-16;18!CL:0005022;2.83e-09;6!CL:0000514;7.05e-08;43!CL:0000222;7.26e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.94e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.40e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!5.38e-16!69;UBERON:0001637!8.45e-15!42;UBERON:0003509!8.45e-15!42;UBERON:0004572!8.45e-15!42;UBERON:0001981!3.31e-14!60;UBERON:0007500!3.31e-14!60;UBERON:0004537!3.31e-14!60;UBERON:0006965!3.31e-14!60;UBERON:0004872!2.55e-13!84;UBERON:0002049!2.73e-13!79;UBERON:0007798!2.73e-13!79;UBERON:0004573!6.50e-12!33;UBERON:0004571!6.50e-12!33;UBERON:0001986!1.00e-11!18;UBERON:0004638!1.00e-11!18;UBERON:0004852!1.00e-11!18;UBERON:0000487!3.26e-10!22;UBERON:0004535!4.43e-10!110;UBERON:0003914!6.39e-10!118;UBERON:0001009!3.86e-09!113;UBERON:0006914!1.15e-08!25;UBERON:0000490!1.60e-08!138;UBERON:0000947!2.98e-07!21;UBERON:0010191!2.98e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.07e-22;33!UBERON:0004571;1.07e-22;33!UBERON:0001637;2.07e-19;42!UBERON:0003509;2.07e-19;42!UBERON:0004572;2.07e-19;42!UBERON:0004638;9.12e-16;18!UBERON:0001986;9.12e-16;18!UBERON:0004852;9.12e-16;18!UBERON:0000487;3.45e-15;22!UBERON:0007500;1.41e-13;56!UBERON:0001981;1.41e-13;56!UBERON:0004537;1.41e-13;56!UBERON:0000055;2.25e-13;65!UBERON:0000947;3.21e-13;21!UBERON:0010191;3.21e-13;21!UBERON:0006914;4.42e-13;25!UBERON:0003915;1.70e-12;9!UBERON:0004700;1.70e-12;9!UBERON:0001917;1.70e-12;9!UBERON:0002049;1.36e-11;75!UBERON:0007798;1.36e-11;75!UBERON:0000490;1.62e-10;33!UBERON:0003914;3.12e-08;74!UBERON:0002456;3.81e-08;2!UBERON:0005800;3.57e-07;2!UBERON:0001515;3.57e-07;2!UBERON:0001529;3.57e-07;2!UBERON:0007204;3.57e-07;2!UBERON:0001473;6.06e-07;8!UBERON:0004536;6.06e-07;8!UBERON:0006558;6.06e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.30e-30,68;UBERON:0001637,4.72e-26,42;UBERON:0003509,4.72e-26,42;UBERON:0004572,4.72e-26,42;UBERON:0007500,2.10e-25,59;UBERON:0001981,2.10e-25,59;UBERON:0004537,2.10e-25,59;UBERON:0006965,2.10e-25,59;UBERON:0002049,2.26e-25,78;UBERON:0007798,2.26e-25,78;UBERON:0004573,2.34e-24,33;UBERON:0004571,2.34e-24,33;UBERON:0004872,1.13e-19,83;UBERON:0004535,1.41e-17,109;UBERON:0001009,6.61e-17,112;UBERON:0004638,9.17e-16,18;UBERON:0001986,9.17e-16,18;UBERON:0004852,9.17e-16,18;UBERON:0000487,2.90e-15,22;UBERON:0000947,2.14e-13,21;UBERON:0010191,2.14e-13,21;UBERON:0006914,3.80e-13,25;UBERON:0003914,3.85e-13,117;UBERON:0003915,1.92e-12,9;UBERON:0004700,1.92e-12,9;UBERON:0001917,1.92e-12,9;UBERON:0000490,8.95e-11,148;UBERON:0007503,6.32e-09,78;UBERON:0001134,2.79e-08,62;UBERON:0002036,2.79e-08,62;UBERON:0003082,2.79e-08,62;UBERON:0002456,3.72e-08,2;UBERON:0002385,6.44e-08,64;UBERON:0001015,6.44e-08,64;UBERON:0000383,6.44e-08,64;UBERON:0002329,7.52e-08,71;UBERON:0003059,7.52e-08,71;UBERON:0007282,7.52e-08,71;UBERON:0004290,7.52e-08,71;UBERON:0009618,7.52e-08,71;UBERON:0003077,1.08e-07,72;UBERON:0007285,1.08e-07,72;UBERON:0004111,1.12e-07,240;UBERON:0007524,1.54e-07,73;UBERON:0005800,3.60e-07,2;UBERON:0001515,3.60e-07,2;UBERON:0000486,4.16e-07,83;UBERON:0003834,7.34e-07,5;UBERON:0001533,7.34e-07,5;UBERON:0001473,8.39e-07,8;UBERON:0004536,8.39e-07,8;UBERON:0006558,8.39e-07,8 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,1.0007329835313,0,1.74467704820074,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,2.6893005858071,3.01347264011988,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0.572471974262113,0.136874425072884,0.125542639594803,0.152826811495903,0.57470412614962,0.472264687882075,0,0.383829398097213,0,0,0,0,0.154934401160603,0.284338464974843,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0.334372990781356,0,0,0,0.668462741311041,0.589211814949674,0.664601683750863,0.541607727530031,0.25618263945135,0.520237390239513,0,0.552700035571697,0.289803085735052,0.296573126324121,0.267540828089713,0,0.226618685395132,0,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,2.43806866313962,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0.756278537312543,0.443458794925128,0.351339142772504,0.196468613246569,0,0,0,0,0,0.715471872916026,0.571994910780128,0.74291500265913,0.596287222100115,0.860234595106124,1.38856200643038,1.13061588384802,2.51699661725944,3.02629846134074,0.417989933073621,2.32575083252396,0.35576626268671,1.00416183829401,1.20848795132744,0.760272105718513,0.976248230192678,1.10298924103761,1.62028389576352,1.60739510911344,0.898117490504679,0.675668882899933,1.53316637465883,0.949265659568129,1.09921046358244,0,0,0,0.993943903390637,0.633152558322899,1.72131935057184,1.14734648299525,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.808264032418128,0.163461903113459,0,0,0,0,1.1409436430889,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0.612975591598039,0.150238058906597,0.340296549480063,0.717558542755448,0,0,1.20036438433761,0.103052529238439,0.515281080091258,0.18611685633159,0.506328996723799,0,1.51460264546469,0.184099797284599,0,0.355009592516614,0.10075209822764,0.169560592310488,0.193260853163297,1.09098448236334,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.404493924480493,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,2.7429625074604,0.925971025153221,2.09279567458058,0,0,0,0,0,0.93733833986777,0.16798212819886,0.283550194484773,1.43293636324557,0.290633938513962,0.383382679165211,0.492663237895943,0.176096868026452,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,1.16344544182,0,0.845302752556,0,0,0,0,0.532844358032199,0.285955987316295,0,0,0.325736184293735,0,0,2.41151501647669,0,1.19967589418468,0,0,0,0,0,0,1.01346914667305,0.821905290201534,0.716243852959582,0.224170287987055,0.394061520403854,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0.207970861530807,0.713715955188647,0.630809660135739,0.702848489956279,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.460385919864187,0,0.256278298511402,0,0.64341568457443,0,0.462629081407967,0,0.0821271560138091,0.519254429183621,0.348631135379878,0.120859449591622,0.200506470303285,0.828728900423067,0.459257792658427,0,0.131124414959424,0,0.539107359730903,0,0,0.422206515571503,1.13733384070897,1.36074964221213,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0.457847324091717,0.165018999841176,0,0,1.6068392984416,0,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0.170453254832202,0.0890320356467374,1.98341898433174,0.960950336825531,4.08360679982669,0.4046311234222,1.39453664789186,1.88887408098384,0.6970372701606,0.616067160352178,0,0,1.11194531462352,1.00187420719394,0,0,0.38126038784765,0,0,0.318203247925937,2.35484592059769,0,1.09814811894422,0.235624804691373,0.404364963146632,3.17020642346017,0.842516912477962,0,2.43713489631284,3.16950440270266,0.409499734223957,0,1.13008116620243,0,1.99031692572366,0.438450885253763,0.578775534266688,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0.709522128141196,0,0.329294892959902,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0,0.459446800413919,0.507447609232169,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0.185803175125719,0,1.20941133692304,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0.121360521749513,0.222886768554957,0,0.23874448473769,0,0.921482106297696,0,0,0.222617410045812,0,0,0,0,0,1.43176155503017,0.246169610922139,0.311039587661807,0.0898683511473268,0.358042349351218,0.511572370226872,0.295930216910801,0,0,0,0,0,0,0.26237999998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|short_description=p@chr2:67625218..67625244,- | |||
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Revision as of 03:36, 21 January 2014
Short description: | p@chr2:67625218..67625244, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:67625218..67625244, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.05e-23 | 121 |
endothelial cell of vascular tree | 4.76e-23 | 24 |
endothelial cell | 8.18e-19 | 36 |
lining cell | 6.38e-17 | 58 |
barrier cell | 6.38e-17 | 58 |
blood vessel endothelial cell | 9.17e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.17e-16 | 18 |
meso-epithelial cell | 2.91e-14 | 45 |
endothelial cell of artery | 1.92e-12 | 9 |
vascular associated smooth muscle cell | 2.72e-12 | 32 |
embryonic cell | 1.23e-10 | 250 |
smooth muscle cell | 6.15e-10 | 43 |
smooth muscle myoblast | 6.15e-10 | 43 |
muscle precursor cell | 4.37e-09 | 58 |
myoblast | 4.37e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.37e-09 | 58 |
lymphangioblast | 4.43e-09 | 6 |
endothelial cell of lymphatic vessel | 4.43e-09 | 6 |
vascular lymphangioblast | 4.43e-09 | 6 |
squamous epithelial cell | 5.05e-09 | 63 |
muscle cell | 1.79e-08 | 55 |
aortic endothelial cell | 2.08e-08 | 6 |
smooth muscle cell of the internal thoracic artery | 3.72e-08 | 2 |
electrically responsive cell | 2.45e-07 | 61 |
electrically active cell | 2.45e-07 | 61 |
thoracic aorta endothelial cell | 3.60e-07 | 2 |
smooth muscle cell of the subclavian artery | 7.34e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.40e-08 | 14 |