FFCP PHASE1:Hg19::chr2:71693812..71693838,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8291 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3097 | |||
|TSSclassifier=strong | |||
|UniProt=O75923 | |||
|association_with_transcript=0bp_to_ENST00000394120,ENST00000409366,ENST00000409651,ENST00000409744,ENST00000410020,ENST00000410041,NM_001130455,NM_001130982,NM_001130983,NM_001130984,NM_001130985,NM_001130986,NM_001130987,uc002sif.2,uc010fej.2,uc010fek.2,uc010fel.2,uc010fem.2,uc010fen.2,uc010feo.2_5end | |||
|description=CAGE_peak_1_at_DYSF_5end | |||
|id=chr2:71693812..71693838,+ | |||
|ontology_enrichment_celltype=CL:0000115!1.88e-17!35;CL:0002139!2.84e-17!24;CL:0002078!1.07e-13!44;CL:0000071!2.49e-13!18;CL:0002546!2.49e-13!18;CL:0000213!2.88e-13!57;CL:0000215!2.88e-13!57;CL:0000222!6.49e-08!119;CL:1000413!2.00e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.88e-19;24!CL:0000115;3.07e-18;36!CL:0000071;5.85e-15;18!CL:0002078;2.64e-11;45!CL:0000213;7.56e-09;58!CL:0000215;7.56e-09;58!CL:1000413;3.06e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.32e-21,36;CL:0002139,2.04e-19,24;CL:0002078,3.27e-17,45;CL:0000213,1.76e-15,58;CL:0000215,1.76e-15,58;CL:0000071,6.21e-15,18;CL:0002546,6.21e-15,18;CL:1000413,3.16e-08,9;CL:0000222,4.35e-08,121 | |||
|ontology_enrichment_development_v019=CL:0002546;5.85e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!1.05e-18!625;UBERON:0000480!2.06e-18!626;UBERON:0000468!4.90e-18!659;UBERON:0001986!2.49e-13!18;UBERON:0004638!2.49e-13!18;UBERON:0004852!2.49e-13!18;UBERON:0003914!1.80e-12!118;UBERON:0000922!2.01e-12!612;UBERON:0002050!2.68e-12!605;UBERON:0005423!2.68e-12!605;UBERON:0000923!6.00e-12!604;UBERON:0005291!6.00e-12!604;UBERON:0006598!6.00e-12!604;UBERON:0002532!6.00e-12!604;UBERON:0004111!3.14e-11!241;UBERON:0000025!3.51e-11!194;UBERON:0002049!3.53e-11!79;UBERON:0007798!3.53e-11!79;UBERON:0000119!5.73e-11!312;UBERON:0001009!8.22e-11!113;UBERON:0004872!1.69e-10!84;UBERON:0000483!2.13e-10!309;UBERON:0003081!2.95e-10!216;UBERON:0000477!3.80e-10!286;UBERON:0000055!3.83e-10!69;UBERON:0003103!6.11e-10!69;UBERON:0000062!7.89e-10!511;UBERON:0004535!8.68e-10!110;UBERON:0000487!9.68e-10!22;UBERON:0000926!6.48e-09!448;UBERON:0004120!6.48e-09!448;UBERON:0006603!6.48e-09!448;UBERON:0001981!2.75e-08!60;UBERON:0007500!2.75e-08!60;UBERON:0004537!2.75e-08!60;UBERON:0006965!2.75e-08!60;UBERON:0007023!8.41e-08!115;UBERON:0006914!1.59e-07!25;UBERON:0003915!2.00e-07!9;UBERON:0004700!2.00e-07!9;UBERON:0001917!2.00e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.85e-15;18!UBERON:0001986;5.85e-15;18!UBERON:0004852;5.85e-15;18!UBERON:0000487;1.44e-11;22!UBERON:0006914;5.33e-09;25!UBERON:0003915;3.06e-08;9!UBERON:0004700;3.06e-08;9!UBERON:0001917;3.06e-08;9!UBERON:0000490;5.62e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.21e-15,18;UBERON:0001986,6.21e-15,18;UBERON:0004852,6.21e-15,18;UBERON:0003914,3.33e-12,117;UBERON:0000487,1.42e-11,22;UBERON:0003103,7.03e-11,68;UBERON:0002049,5.56e-10,78;UBERON:0007798,5.56e-10,78;UBERON:0000922,2.31e-09,592;UBERON:0005423,2.99e-09,581;UBERON:0001009,4.52e-09,112;UBERON:0006914,5.24e-09,25;UBERON:0004872,6.90e-09,83;UBERON:0000055,1.09e-08,68;UBERON:0003081,2.81e-08,203;UBERON:0003915,3.16e-08,9;UBERON:0004700,3.16e-08,9;UBERON:0001917,3.16e-08,9;UBERON:0004111,3.56e-08,240;UBERON:0004535,4.68e-08,109;UBERON:0000119,5.75e-08,309;UBERON:0002050,1.04e-07,564;UBERON:0000025,1.58e-07,192;UBERON:0000926,1.84e-07,315;UBERON:0004120,1.84e-07,315;UBERON:0006603,1.84e-07,315;UBERON:0000483,1.87e-07,306;UBERON:0000923,3.64e-07,560;UBERON:0010316,3.64e-07,560;UBERON:0005291,3.64e-07,560;UBERON:0006598,3.64e-07,560;UBERON:0010317,3.64e-07,560;UBERON:0002532,3.64e-07,560;UBERON:0002417,8.37e-07,60;UBERON:0000916,8.37e-07,60 | |||
|phase1_expression=0.181678379270557,0.856402095563933,5.92008497203079,1.0007329835313,0.893922188854576,2.61701557230111,0,0,0.261185628199839,0,0,68.3721494767439,55.1272984497468,0.123766352960047,0,0.672325146451775,2.41077811209591,2.92124036154949,1.46379839637152,5.0479633811483,9.58803248847989,2.5076377718247,0.85870796139317,0.547497700291537,4.77062030460251,0,0,0,1.57345710739562,0,0.464448369948228,0.919421224478927,0,2.58827807116751,0,0,0,4.43196326825502,2.80762226458198,3.03815219002193,7.83704159839735,4.53451132426571,7.7272670290256,1.59938062657521,0.755751887377619,1.21292030593908,0.697287110717054,1.6446715520873,2.16794459626573,10.6446185159196,9.22178543504762,7.09446689665756,1.72372840368309,1.93645405075148,5.41705946377367,2.82363509313907,0.818718450173537,0.449446968890169,1.53041946185451,1.28371610830437,3.19668562899521,12.5343494070952,9.17532825059507,6.39337125799041,2.03146467040009,0,1.24564449799115,7.78870862295904,6.77927793946262,5.64690996233303,1.81619850790011,1.47311054395026,1.26584954976354,2.74631872205524,1.4882300997553,3.35453832813401,0.112328631146495,0.300353785683013,1.12507910687956,0.855038231223746,0.79566670879636,1.0959849225878,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0.821127996921047,0,0,0,0,4.69490601792545,8.95037932904712,0,0,0.289693037921647,0,0,1.79616152611729,4.65631734671384,2.54720878510066,8.71010852059789,1.09288586487763,0,2.59637914923747,3.65672448328461,2.79211717089617,0,0,0,133.369575343059,142.798942787617,179.124498829519,154.329068145255,132.14232240612,60.8010872687549,88.8228607781445,270.303930091118,254.017111558311,190.121308050333,137.767626451328,108.718911117747,107.875429436291,133.46169816555,45.3679490813785,107.606172582316,159.191325191954,127.701418868087,104.255313476801,161.375162126582,151.507842230447,0,0,0,10.4364109856017,4.81195944325403,0.794455084879313,0.286836620748814,2.83734705758686,1.68203280042692,6.4049397437823,37.7401349078255,1.24484414159907,16.2999913204323,10.4615617992614,4.69208025699287,1.15235184896,0,0,23.9598165048669,0,0,0,0,0,0,0,0,0,2.73048408581408,0,0,0.125118519871964,0.277064115484183,1.75591048352335,1.5324389789951,0.45071417671979,2.7223723958405,3.58779271377724,0.427114777637135,0.211931901159562,0,0.103052529238439,3.86460810068444,0.558350568994769,1.35021065793013,0.584622030967192,0.504867548488229,0,0,2.13005755509969,0.604512589365842,0.169560592310488,6.76412986071539,4.63668405004419,0.860413786167011,0.121973706129595,0,0.464775771478074,0.310983165046111,0.252320850875628,0.36497735907583,0,1.28648187638577,0,0,0,0,0.168584690078102,0.482022059766964,0,0,0,0.134831308160164,0.392442930250692,0,456.918226412657,217.374749395341,0,24.9914809355421,1.26755034821831,5.89696330006576,36.0381843075657,0,0.245976877086227,8.40682270462775,0.219500570817251,2.24803506515239,0,0.833296006426766,0.325808305310325,0,11.5465073620219,0.231860809950154,4.10930429825376,104.088208835734,41.668696131895,54.7931958435643,0.790204397959275,0.858486162094873,2.21595305478658,0.234004265139238,0.297262324577456,0.93733833986777,9.74296343553385,6.09632918142262,5.82130397568514,0.290633938513962,2.68367875415648,0,0,0.621984346622316,0.288239906833923,0,0,0.381988425558278,0,3.4214489204541,0,0,0,13.1193368684072,6.5394010324992,2.56684000373325,8.79047667152889,3.57656445851882,7.607724773004,12.4990914794889,17.6812642749322,0.257207374262142,1.41849132023278,0,0.428933980974443,0,0,4.88604276440603,1.06617584622764,0,0.301439377059586,2.61460037580088,0.499864955910285,3.64871341923571,2.00902836572851,0,1.19812427745791,0,0,4.34343920002738,1.2328579353023,8.0577433457953,0,0.197030760201927,0,0,0.254094624222463,0,0,0.167516265334349,0,2.24702107184155,2.99161459204025,7.0450637284126,0,0,0,1.45579603071565,2.3195768543631,2.83864347061082,2.10854546986884,0.601892199455438,0,1.03473071292505,0.664225598535437,1.84369168541703,0,9.00685324328607,21.6180357000839,0.206768026122887,1.07857100409308,0.853820462427555,0.909382714338778,36.6157966923094,12.7003923198466,2.97729369382532,21.7916002069049,3.92924132206303,27.2936387914643,3.58195074346692,12.0640440857706,2.96836132889982,0,0,0,0,0,0,5.21316822788541,0.920809889358963,0,0,0.131124414959424,7.670393419426,3.61972084390749,14.1182958451834,10.2297457257282,3.0609972378934,412.852184177355,302.766795392198,97.8099099942691,161.938615324804,11.9216432519295,23.5794193711781,0,1.66215201785745,10.2982387172202,0,0,4.61610225209501,21.9769812618803,13.3405141812364,16.2804798403401,34.5216882365155,33.4988569677587,3.44559322797703,0.650060246036521,0,3.57681657680851,2.00263202249038,4.45160656705776,17.0917349880818,0.322260734604821,1.30515024522806,9.97151540768381,19.2309196996953,2.80984356113663,0.192190067365106,0.638063562472921,0.2023155617111,0,0.62962469366128,0,1.84820148105653,0.532306030317022,1.73986598415015,0.18532421910392,0.429374660225974,7.07100901783368,8.5422444674056,2.85945290885737,0,0.855877976067841,0,0.78494864019923,0,0,0.117812402345686,2.22400729730648,4.75530963519025,2.94880919367287,0,0,3.16950440270266,0,0,0,0,0.66343897524122,0.876901770507525,0,0.655894752046633,0.405820753925408,1.8589409885985,1.69017361519345,0.286822704408103,0.392996164052485,0.7133421029625,1.06428319221179,0.422215270595328,0,0,0,1.92444225451024,2.01090682660736,4.3556393944529,15.7220147297221,33.5794190683559,13.47771805341,19.5109267556137,28.0262548252491,0.507447609232169,1.52927441428475,2.27858874869665,0.238231775457789,0.411362273086194,1.29694662238543,0.540031437238115,0.79312517629427,0.320472213382419,0,3.18552280775341,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,15.9693915406364,0.242721043499027,0,0,0,0.296964680832639,0.614321404198464,0,1.26602474769461,3.89580467580171,0,0,3.18796781201712,8.01223355040328,0,8.69283801268316,0,1.86623752597084,25.8820851304301,0.179021174675609,0,5.12945709312055,0,1.11136990144637,0.969332746095218,1.20598527610407,1.99613798001194,0.520855522170466,0,27.5499838665222,0,4.83081935556256,0,0,0,0.520874984799877,0.885741385813839,1.20596438625408,0,0.663475559587348,0,0.219385397153973,0,0,3.00106008164809,0,4.38071418337314,1.07709173291727,1.73835795075213,4.14701507651495,1.83195186803725,2.13213910407454,0,0,0,0,0,0,0,0,0,2.61172493054636,0.424059214301822,0,2.98578579323551,6.36894464424042,7.33236173920351,0,0,0,1.55022605855557,62.6010564893055,0.702793337176017,0,0.586993856796269,2.42780379534093,2.76209081994573,16.9387002468129,1.22429104652196,8.9093077276168,0.751617097072463,0.207376382794494,2.65861549082874,0.992975867626496,2.19753042885058,4.77889719091835,0,0,0,0.0979923974143777,0,4.01871336956669,0.171986032471617,0,0,0,5.62536295632833,0,6.10148000107438,7.40026393092455,2.78200456384186,0.569797163602908,0.195551382734803,11.4627112959693,7.25740182113799,1.59847687665704,0.288180834308212,0.229073192331831,0,0.14405479798815,2.23654564017779,4.00679858848552,5.30026403687095,4.39331954511799,1.93796613509011,2.88950589901519,2.40168115483916,1.36905378891993,0,10.314370594079,0,11.7298608534347,10.7705399285491,34.4579051796871,14.3768880359274,16.3105898291897,24.548860318606,8.66666795078769,11.1692963898145,3.49487848582361,0,0,0,0.196854963029498,0,0,1.22583065500418,0,0,0.415440338029185,0.2249738915515,0,0.364497339948148,0,7.88057072991982,12.3268282117246,0.950403028674658,1.25501137532991,22.4540780863751,17.8673831593342,28.4699547257136,1.5256112259285,0.542999601753713,0.864221491201268,0.326587360109409,22.7487363968726,0.164185041498678,1.36310417428337,8.61171895552955,15.2414323025206,15.9008266694666,1.29282956361551,3.04134984008187,1.88195521672762,0.704815022316672,23.0660811146221,13.3623659334716,21.9546699334014,14.3888146325466,0,0,0.638341257770182,9.24830265728106,16.7962228995209,3.982492497925,3.27872630709804,0.314108192500469,0,0.244052529803926,0.876336514945499,2.86704597845036,1.44207766997908,1.61450647647597,0.276697269872462,0,0.151649117541648,0.856396000634902,1.17632909849086,0,0.144921028610825,0,0,0,0,0.251567901752575,1.77962244319307,0.457680136793847,0,0,0.591420599958536,1.59296767163702,2.24901556081802,1.08684069813382,0,5.84851772027589,8.86966605079948,0.450772826991655,1.90402606084398,6.91680246447925,2.36403256963327,1.93339002676479,0,6.76763010787647,122.408495986925,0,0,0,2.50405779529494,0,3.13193150358254,1.58694147858591,1.389134845943,3.42631386309055,10.7453304648892,0.308801447160972,1.31570429747224,40.4618144216068,10.0315299900876,6.58875518546983,0.256241518587947,1.0362910251936,3.03859956177382,1.52084279766904,0,0,0,8.84546591885314,0.737318726261158,353.313870255624,0,0.533458648470704,0,11.9178350249036,0,0.139879507719444,3.73246356019784,0,0,0,0,0,0,0,0,7.95010876633546,0.0788617450012534,0,0,0,0.770750701157514,0,1.11743701340006,0.615349092722265,0.252071696221718,0.760729777106397,0.807378228159255,0,0.687034029507179,0.235939446695481,1.10057159113007,1.84841065840541,94.5827596758574,0,0,8.95002907356161,27.4318893436787,3.90757005616546,0,3.43921026771203,21.8827007601227,0.742913430802341,0,1.65349437200947,0.19024743058172,1.64092442705466,1.09651553371436,14.3901241732895,0,1.91643641459393,1.07140367175657,3.36283722218824,3.03482802118316,6.60220354918763,29.8039963746466,0,3.25827217931095,0.747667062745149,0.920818829879887,1.30013224972365,4.22679327189863,5.72999577808752,0.785577949580009,1.12108865325516,20.0894918512089,8.20524846630761,1.43325506366115,9.14899765461201,0,0,0.521574816907738,0,0,0,0,2.15113679410139,3.0766320189947,2.2155485237381,5.08064460229115,7.7896335304977,2.17144469965024,1.91107787795487,2.46081949955143,0,0,49.20459162628,25.2550504866368,110.182370977129,24.285549652957,0.467878926924211,0.994753875806841,0.713520544665411,0,0,3.92503393273351,3.16414048242573,7.6495846176385,0,3.92237314806249,0.707029641304878,3.14093547383912,2.37637120261669,6.7624916413344,7.81664727563958,44.5483771224506,59.6235463755589,0,0.535661815816973,13.4100051251963,0.320965466756673,13.8763913766838,1.83491713361816,0.860037498908708,0,0.611923411718232,0.436350690340377,12.6966441723696,0,0,0.865253124247578,0.126166424835079,0.546327859818478,0,1.1218771271618,1.60330443159336,0,0,3.56159881625725,2.94760543171796,0,0.827463966895162,8.74259325794022,23.0922498519828,2.1314340245882,3.04166100049704,1.79410980128981,7.82860046821428,25.2646486197774,8.05551967218757,28.7475972911636,2.49202596153974,10.0411087549747,14.3043953314786,2.36069478971826,0.320182037633146,0,0.0898252021065869,9.38563769613817,10.3905227555436,22.7861859856814,21.3042167739364,6.23948760132181,0 | |||
|short_description=p1@DYSF | |||
}} |
Revision as of 03:51, 21 January 2014
Short description: | p1@DYSF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DYSF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000394120, ENST00000409366, ENST00000409651, ENST00000409744, ENST00000410020, ENST00000410041, NM_001130455, NM_001130982, NM_001130983, NM_001130984, NM_001130985, NM_001130986, NM_001130987, uc002sif.2, uc010fej.2, uc010fek.2, uc010fel.2, uc010fem.2, uc010fen.2, uc010feo.2_5end |
EntrezGene: | DYSF |
HGNC: | 3097 |
UniProt: | O75923 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.32e-21 | 36 |
endothelial cell of vascular tree | 2.04e-19 | 24 |
meso-epithelial cell | 3.27e-17 | 45 |
lining cell | 1.76e-15 | 58 |
barrier cell | 1.76e-15 | 58 |
blood vessel endothelial cell | 6.21e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.21e-15 | 18 |
endothelial cell of artery | 3.16e-08 | 9 |
mesodermal cell | 4.35e-08 | 121 |