FFCP PHASE1:Hg19::chr3:77088989..77088997,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6092 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10250 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HCK4 | |||
|association_with_transcript=-39bp_to_ENST00000461745_5end | |||
|coexpression_cluster_id=C2543 | |||
|description=CAGE_peak_10_at_ROBO2_5end | |||
|id=chr3:77088989..77088997,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;4.94e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.93e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.29e-08;1!UBERON:0003852;2.29e-08;1 | |||
|ontology_enrichment_disease=DOID:5409!2.67e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:8552;2.29e-08;1!DOID:5409;4.15e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,2.29e-08,1;DOID:5409,3.41e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.42e-19!82;UBERON:0005743!5.40e-19!86;UBERON:0001049!1.25e-17!57;UBERON:0005068!1.25e-17!57;UBERON:0006241!1.25e-17!57;UBERON:0007135!1.25e-17!57;UBERON:0000073!1.94e-17!94;UBERON:0001016!1.94e-17!94;UBERON:0002346!3.99e-14!90;UBERON:0002780!7.63e-13!41;UBERON:0001890!7.63e-13!41;UBERON:0006240!7.63e-13!41;UBERON:0007023!9.54e-13!115;UBERON:0000955!1.04e-12!69;UBERON:0006238!1.04e-12!69;UBERON:0002616!1.57e-12!59;UBERON:0003080!2.04e-12!42;UBERON:0000924!4.10e-12!173;UBERON:0006601!4.10e-12!173;UBERON:0001869!6.00e-12!32;UBERON:0003075!5.00e-11!86;UBERON:0007284!5.00e-11!86;UBERON:0001893!5.19e-11!34;UBERON:0002020!5.23e-11!34;UBERON:0003528!5.23e-11!34;UBERON:0002791!4.34e-10!33;UBERON:0004121!8.38e-10!169;UBERON:0000153!5.48e-09!129;UBERON:0007811!5.48e-09!129;UBERON:0000033!2.26e-08!123;UBERON:0003056!6.29e-08!61;UBERON:0000369!1.12e-07!4;UBERON:0002435!1.12e-07!4;UBERON:0000204!1.12e-07!4;UBERON:0010082!1.12e-07!4;UBERON:0002240!7.53e-07!3;UBERON:0002308!9.78e-07!9;UBERON:0000125!9.78e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.34e-16;2!UBERON:0002757;5.34e-16;2!UBERON:0010134;5.34e-16;2!UBERON:0005408;5.34e-16;2!UBERON:0001899;5.34e-16;2!UBERON:0000922;2.41e-13;49!UBERON:0003296;1.94e-08;4!UBERON:0010133;1.94e-08;4!UBERON:0002784;1.94e-08;4!UBERON:0007029;2.29e-08;1!UBERON:0005705;2.29e-08;1!UBERON:0008193;2.29e-08;1!UBERON:0010912;2.29e-08;1!UBERON:0002514;2.29e-08;1!UBERON:0003457;2.29e-08;1!UBERON:0008907;2.29e-08;1!UBERON:0008001;2.29e-08;1!UBERON:0007213;2.29e-08;1!UBERON:0009891;2.29e-08;1!UBERON:0007914;2.29e-08;1!UBERON:0007375;2.29e-08;1!UBERON:0003323;2.29e-08;1!UBERON:0010258;2.29e-08;1!UBERON:0005253;2.29e-08;1!UBERON:0007842;2.29e-08;1!UBERON:0002397;2.29e-08;1!UBERON:0003113;2.29e-08;1!UBERON:0003277;2.29e-08;1!UBERON:0001709;2.29e-08;1!UBERON:0002244;2.29e-08;1!UBERON:0005620;2.29e-08;1!UBERON:0010364;2.29e-08;1!UBERON:0004288;2.29e-08;1!UBERON:0000945;9.83e-07;5!UBERON:0010039;9.83e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.56e-16,2;UBERON:0002757,5.56e-16,2;UBERON:0010134,5.56e-16,2;UBERON:0005408,5.56e-16,2;UBERON:0001899,5.56e-16,2;UBERON:0005705,1.71e-08,1;UBERON:0008193,1.71e-08,1;UBERON:0010912,1.71e-08,1;UBERON:0002514,1.71e-08,1;UBERON:0003457,1.71e-08,1;UBERON:0008907,1.71e-08,1;UBERON:0008001,1.71e-08,1;UBERON:0007213,1.71e-08,1;UBERON:0009891,1.71e-08,1;UBERON:0007914,1.71e-08,1;UBERON:0009292,1.71e-08,1;UBERON:0003099,1.71e-08,1;UBERON:0007375,1.71e-08,1;UBERON:0003323,1.71e-08,1;UBERON:0010258,1.71e-08,1;UBERON:0007842,1.71e-08,1;UBERON:0009494,1.71e-08,1;UBERON:0010042,1.71e-08,1;UBERON:0010045,1.71e-08,1;UBERON:0010259,1.71e-08,1;UBERON:0010359,1.71e-08,1;UBERON:0009526,1.71e-08,1;UBERON:0002397,1.71e-08,1;UBERON:0003113,1.71e-08,1;UBERON:0003277,1.71e-08,1;UBERON:0001709,1.71e-08,1;UBERON:0004066,1.71e-08,1;UBERON:0002244,1.71e-08,1;UBERON:0005620,1.71e-08,1;UBERON:0004362,1.71e-08,1;UBERON:0010364,1.71e-08,1;UBERON:0010046,1.71e-08,1;UBERON:0005868,1.71e-08,1;UBERON:0007238,1.71e-08,1;UBERON:0004288,1.71e-08,1;UBERON:0004068,1.71e-08,1;UBERON:0010334,1.71e-08,1;UBERON:0003852,1.71e-08,1;UBERON:0010253,1.71e-08,1;UBERON:0003296,1.98e-08,4;UBERON:0010133,1.98e-08,4;UBERON:0002784,1.98e-08,4;UBERON:0007029,2.13e-08,1;UBERON:0001017,4.86e-07,81;UBERON:0011216,7.08e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,1.30139853857622,0,0.502548796003046,1.91381625495949,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0.270455678475983,0,8.45922030527097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,1.93866549219044,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.520874984799877,0.885741385813839,0.241192877250816,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,1.32969345520125,0,0.19606253431774,0,0,1.27149263184303,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,3.0607276163049,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0,0,6.07043959679353,1.20116498503375,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0,0.806201669840715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,1.46872846777995,0.316801009558219,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0.129282956361551,0,0,0,0.427149650270779,3.14408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.3755727921195,0,0,0.310482014706917,0.138348634936231,0,0,0,0,0,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0.169732529954025,0.212574920101683,0.619678821295011,0,0,0,0,1.76337971845342,0,0.192687675289379,0,0,0.205116364240755,5.5455773168778,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,4.37579847214576,0,0,0.175871244359621,0.127762427639595,8.57122937405259,3.02655349996942,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.214429632529969,0,0.581207126840626,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,1.1598144313382,1.45713297917742,0,0,1.78380136166353,0.22589216407792,2.6385724018903,0.150962843566674,0,0.437119121007915,0,0,0,0.981542335574726,0.297046400327086,1.2679671827502,0,0,0.386747327841463,0,0,0,0,1.46067277649303,0,0,0.631086248772738,0.0679914901909147,6.98161104544604,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0.193766729508018,0.434523000071005,0,0,0,0,0,0.0673520530145875,0,1.99596213927608,0.0814032686109745,0,0,0,0,0.122241444182866,0.813792356631477,0,0.402547587182052,0 | |||
|short_description=p10@ROBO2 | |||
}} |
Revision as of 19:53, 21 January 2014
Short description: | p10@ROBO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ROBO2_5end |
Coexpression cluster: | C2543_pineal_parietal_occipital_temporal_hippocampus_duodenum_brain |
Association with transcript: | -39bp_to_ENST00000461745_5end |
EntrezGene: | ROBO2 |
HGNC: | 10250 |
UniProt: | Q9HCK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.93e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 2.29e-08 | 1 |
lung small cell carcinoma | 3.41e-08 | 4 |