Personal tools

FFCP PHASE1:Mm9::chr19:28754692..28754757,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=226075|HGNC=|UniProt=Q6XP49,Q0GE24|association_with_transcript=-125bp_to_ENSMUST00000112612,ENSMUST00000162022,NM_175459,uc008hci.1,uc008hcj.1_5end|description=CAGE_peak_1_at_Glis3_5end|id=chr19:28754692..28754757,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000464!4.97e-10!57;UBERON:0001008!3.83e-08!17;UBERON:0006554!1.19e-07!16;UBERON:0002113!1.42e-07!14;UBERON:0003918!1.42e-07!14;UBERON:0005095!1.42e-07!14;UBERON:0007687!1.42e-07!14;UBERON:0002100!8.63e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0001008,1.37e-08,19;UBERON:0006554,4.29e-08,18;UBERON:0002100,6.16e-08,90;UBERON:0002113,1.27e-07,14;UBERON:0003918,1.27e-07,14;UBERON:0011143,1.27e-07,14;UBERON:0005095,1.27e-07,14;UBERON:0007687,1.27e-07,14;UBERON:0005177,7.82e-07,79|phase1_expression=0.80074423552397,0,0,0,0,1.00727563147134,1.40167584357315,0.258246646883153,0.84473233291,1.17032263160997,0,0,0.513602189793617,0.34968160967599,1.99865857089398,2.22722794128809,3.49780939064073,0.630924330716475,0.685572168028694,2.12194825899015,9.86502165752409,0.496454756004426,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,1.25559489221072,1.5626706890476,0,0.588231488031014,2.73218193983378,1.45653105909346,13.3450627054112,13.0776241273174,25.5129985504737,21.1245662973971,19.6222640742402,29.6576346691537,49.385194364868,23.2377459898102,48.8758718840903,0,2.17608642603403,0,7.97504251711436,6.01720223871389,5.15672092277442,4.85559506063035,4.7609188134483,5.07065122804943,7.45457970552091,9.78224275722253,3.5995988691256,2.96659908770092,2.8419204597844,22.4700082888804,18.8266969607562,0.103689612308478,0.270011876663381,0.420649922702764,2.28520787523043,1.32521124570968,0.367472397644862,0,0.919218786610021,2.20231761998777,2.42605942361857,0.768032666281217,1.58263545276233,1.64677758484337,3.64639359389732,0.558365998002762,1.68828783009504,4.12555268997387,4.71405736757868,4.6982654663704,2.60959224155421,1.8931548333296,2.87171928405785,37.9722480199198,1.72084775396277,0.679971333707751,0,0.649776417447669,0.448026887097336,3.5111105032938,20.1107780642108,16.1067322853779,18.0203183000274,0.281686839553361,85.9787398675929,78.9896243090602,56.8853362522665,13.4224445426953,14.9482320630308,12.6381111253696,5.93756174539112,2.84831672011889,6.08612770165782,0.867426633830679,2.43572382649713,2.99800146432876,1.20578112442098,3.76283862834255,3.26733137457156,6.42706916109372,2.4581890676385,2.65383165584962,3.558870698843,1.98757366614354,1.93950101254089,3.72783522436244,0.878342391034642,1.8850203613211,3.0654846625031,0.239630249011841,1.19980546198682,1.14363204365758,1.79748767285787,1.83000241127451,0.125654352112864,1.91206752211504,1.79000820131231,2.0778804455956,1.62241263067758,5.49932564791708,4.72746488318353,9.85618757891331,2.73574412652416,3.3831315170303,1.14951052216736,1.0803727788321,1.9591626318643,2.31324097114515,2.0498195245576,1.78033276663485,2.58703370739016,2.80238390812695,6.99692496620931,10.5570674498369,4.3839146485515,8.34141747676794,6.268538997399,4.32142486456681,7.16523360546575,0.702213187313235,1.02939162845886,1.98914449576915,2.48550927042602,1.64168241986767,1.08037236876609,4.7348947117042,1.57411385397923,2.77680803197281,1.39520366850245,3.21928081679543,1.40118410840603,1.97471819896177,1.31333971263276,1.21603214318784,0.877199924551994,0.439100230582101,1.20785776884335,10.3042074796422,2.26390147234426,1.32167513193519,2.11560453330835,2.55945900642281,1.16118335930219,2.31961430379768,4.23535401709019,3.55804870151792,3.04361001780095,1.89811624617805,3.12928013975621,2.76468729680296,4.77495532898762,2.9244613067868,4.49409704327111,3.6743468478698,2.98711909881551,6.06937283049861,11.4248512609729,16.9061603509621,20.1614814566861,19.3952487167626,21.8122399858891,36.866901143442,33.9503340353085,35.7957099478335,36.525560520853,0.889357881261447,1.16791574001266,0.982794975566015,0.224862112384854,0.811440485554012,0.482354319504834,1.01850340712568,3.16465751195892,3.24270453550071,1.64736847912849,12.9391385874619,3.72140947668503,2.18426371180192,0.757736633841335,1.25578189465339,0,11.8242041706627,2.08440552947533,3.09633455239849,7.63852885988347,7.04070744865506,8.5428191295326,10.4739201989846,10.1469496886055,8.98520321405289,9.7444463445461,5.89982644032702,7.37384916220821,7.42545422023351,8.82359257347221,0,1.63171705145613,1.96705709207614,3.03530420935206,0.963303539926752,0.820481806145422,8.36068221421045,1.51482556322624,3.47059041357882,3.12350995437311,1.29254038639679,6.69112634267146,9.35754431146055,9.90767857760913,2.42886421004937,4.67609372658099,6.7198922250909,1.28528526568723,12.3487874131194,5.87616492101942,10.4247653986289,15.3422214364458,5.30980553359851,13.8384962608339,10.2790009368015,10.5618844663303,10.6308681437078,17.8312385807478,14.2135561242522,16.7225515559653,17.8248689192361,9.48110273807448,8.4334886859999,12.3762651897824,11.234506989875,11.5239100180039,6.33857550535497,9.85950361145325,7.27094957933322,13.9127677729615,21.3913726782757,14.0053876592716,5.86679270159276,8.68511490541663,4.41056796109924,0.98931751764888,3.55221738730992,2.23157822234177,1.90995750405018,0.984845398470368,2.91480836629851,1.29797711407357,3.58828849675491,11.5576646059405,12.222838806401,3.39063222608444,2.7338845544205,2.97411625168479,0.849892149969277,1.11961161858926,0.829199842826543,1.90934123603023,0.790839983952838,6.30290348093231,3.88819226958485,2.71814784818809,2.83871332870031,4.31565908431426,4.54594006489348,1.57053565190418,5.18459893167171,3.10669656543463,1.69107881605257,6.13017838780313,6.45288112782681,1.36115831840833,1.16243841129958,1.01373675294467,1.29092962510329,19.0098401872167,11.7442465756796,3.14059357073808,1.15212002503146,0.948033361884535,1.01362607645082,1.23253148597793,0.51968329191118,0.716106782669926,1.58945083825012,0.360586348559907,0.147689527174577,0.706765149637033,0.304827226619999,0.604957110821043,1.16949456887703,1.05833025804362,0.935015217452552,2.0405734525369,3.7737612073591,1.52513556236109,1.34307693091263,6.95482538515886,14.2638681342898,41.2091154601346,14.5770497773765,97.8065602868959,3.3885110557024,2.76195141904306,2.29158205375759,2.23409137046794,2.74033007908257,1.5107877947794,2.70009000092722,1.80128481289688,0.453142408984205,1.55328093525546,1.45302286617847,6.78342284781753,6.14640980714883,7.05009479498053,3.14419743941973,3.49302666055027,4.4449345560323,5.15087643097235,7.06022261101994,5.81203587056734,3.29523089857312,5.65879024158229,4.40115085108447,5.57018825922363,4.93945033018274,7.1444053692461,4.51948871184936,5.59436739344745,4.94503080963968,3.82717192349433,6.51451579532289,6.56660482789549,2.86123427936785,4.79643174886684,5.8347815857505,5.49994951295897,5.12198324043763,3.41990624869196,5.02475221229689,5.61142271657738,5.57584585183618,4.0386837773981,4.09231043169689,4.18329471202108,5.5942917184531,4.99621155875892,4.91256377735358,7.73535794573874,4.97349663378993,2.20591419119516,1.15933917810211|short_description=p1@Glis3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:226075
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q6XP49,uniprot:Q0GE24
|association_with_transcript=-125bp_to_ENSMUST00000112612,ENSMUST00000162022,NM_175459,uc008hci.1,uc008hcj.1_5end
|cluster_id=chr19:28754692..28754757,-
|description=CAGE_peak_1_at_Glis3_5end
|id=chr19:28754692..28754757,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000464!4.97e-10!57;UBERON:0001008!3.83e-08!17;UBERON:0006554!1.19e-07!16;UBERON:0002113!1.42e-07!14;UBERON:0003918!1.42e-07!14;UBERON:0005095!1.42e-07!14;UBERON:0007687!1.42e-07!14;UBERON:0002100!8.63e-07!98
|ontology_enrichment_uberon_v019_2=UBERON:0001008,1.37e-08,19;UBERON:0006554,4.29e-08,18;UBERON:0002100,6.16e-08,90;UBERON:0002113,1.27e-07,14;UBERON:0003918,1.27e-07,14;UBERON:0011143,1.27e-07,14;UBERON:0005095,1.27e-07,14;UBERON:0007687,1.27e-07,14;UBERON:0005177,7.82e-07,79
|phase1_expression=0.80074423552397,0,0,0,0,1.00727563147134,1.40167584357315,0.258246646883153,0.84473233291,1.17032263160997,0,0,0.513602189793617,0.34968160967599,1.99865857089398,2.22722794128809,3.49780939064073,0.630924330716475,0.685572168028694,2.12194825899015,9.86502165752409,0.496454756004426,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,1.25559489221072,1.5626706890476,0,0.588231488031014,2.73218193983378,1.45653105909346,13.3450627054112,13.0776241273174,25.5129985504737,21.1245662973971,19.6222640742402,29.6576346691537,49.385194364868,23.2377459898102,48.8758718840903,0,2.17608642603403,0,7.97504251711436,6.01720223871389,5.15672092277442,4.85559506063035,4.7609188134483,5.07065122804943,7.45457970552091,9.78224275722253,3.5995988691256,2.96659908770092,2.8419204597844,22.4700082888804,18.8266969607562,0.103689612308478,0.270011876663381,0.420649922702764,2.28520787523043,1.32521124570968,0.367472397644862,0,0.919218786610021,2.20231761998777,2.42605942361857,0.768032666281217,1.58263545276233,1.64677758484337,3.64639359389732,0.558365998002762,1.68828783009504,4.12555268997387,4.71405736757868,4.6982654663704,2.60959224155421,1.8931548333296,2.87171928405785,37.9722480199198,1.72084775396277,0.679971333707751,0,0.649776417447669,0.448026887097336,3.5111105032938,20.1107780642108,16.1067322853779,18.0203183000274,0.281686839553361,85.9787398675929,78.9896243090602,56.8853362522665,13.4224445426953,14.9482320630308,12.6381111253696,5.93756174539112,2.84831672011889,6.08612770165782,0.867426633830679,2.43572382649713,2.99800146432876,1.20578112442098,3.76283862834255,3.26733137457156,6.42706916109372,2.4581890676385,2.65383165584962,3.558870698843,1.98757366614354,1.93950101254089,3.72783522436244,0.878342391034642,1.8850203613211,3.0654846625031,0.239630249011841,1.19980546198682,1.14363204365758,1.79748767285787,1.83000241127451,0.125654352112864,1.91206752211504,1.79000820131231,2.0778804455956,1.62241263067758,5.49932564791708,4.72746488318353,9.85618757891331,2.73574412652416,3.3831315170303,1.14951052216736,1.0803727788321,1.9591626318643,2.31324097114515,2.0498195245576,1.78033276663485,2.58703370739016,2.80238390812695,6.99692496620931,10.5570674498369,4.3839146485515,8.34141747676794,6.268538997399,4.32142486456681,7.16523360546575,0.702213187313235,1.02939162845886,1.98914449576915,2.48550927042602,1.64168241986767,1.08037236876609,4.7348947117042,1.57411385397923,2.77680803197281,1.39520366850245,3.21928081679543,1.40118410840603,1.97471819896177,1.31333971263276,1.21603214318784,0.877199924551994,0.439100230582101,1.20785776884335,10.3042074796422,2.26390147234426,1.32167513193519,2.11560453330835,2.55945900642281,1.16118335930219,2.31961430379768,4.23535401709019,3.55804870151792,3.04361001780095,1.89811624617805,3.12928013975621,2.76468729680296,4.77495532898762,2.9244613067868,4.49409704327111,3.6743468478698,2.98711909881551,6.06937283049861,11.4248512609729,16.9061603509621,20.1614814566861,19.3952487167626,21.8122399858891,36.866901143442,33.9503340353085,35.7957099478335,36.525560520853,0.889357881261447,1.16791574001266,0.982794975566015,0.224862112384854,0.811440485554012,0.482354319504834,1.01850340712568,3.16465751195892,3.24270453550071,1.64736847912849,12.9391385874619,3.72140947668503,2.18426371180192,0.757736633841335,1.25578189465339,0,11.8242041706627,2.08440552947533,3.09633455239849,7.63852885988347,7.04070744865506,8.5428191295326,10.4739201989846,10.1469496886055,8.98520321405289,9.7444463445461,5.89982644032702,7.37384916220821,7.42545422023351,8.82359257347221,0,1.63171705145613,1.96705709207614,3.03530420935206,0.963303539926752,0.820481806145422,8.36068221421045,1.51482556322624,3.47059041357882,3.12350995437311,1.29254038639679,6.69112634267146,9.35754431146055,9.90767857760913,2.42886421004937,4.67609372658099,6.7198922250909,1.28528526568723,12.3487874131194,5.87616492101942,10.4247653986289,15.3422214364458,5.30980553359851,13.8384962608339,10.2790009368015,10.5618844663303,10.6308681437078,17.8312385807478,14.2135561242522,16.7225515559653,17.8248689192361,9.48110273807448,8.4334886859999,12.3762651897824,11.234506989875,11.5239100180039,6.33857550535497,9.85950361145325,7.27094957933322,13.9127677729615,21.3913726782757,14.0053876592716,5.86679270159276,8.68511490541663,4.41056796109924,0.98931751764888,3.55221738730992,2.23157822234177,1.90995750405018,0.984845398470368,2.91480836629851,1.29797711407357,3.58828849675491,11.5576646059405,12.222838806401,3.39063222608444,2.7338845544205,2.97411625168479,0.849892149969277,1.11961161858926,0.829199842826543,1.90934123603023,0.790839983952838,6.30290348093231,3.88819226958485,2.71814784818809,2.83871332870031,4.31565908431426,4.54594006489348,1.57053565190418,5.18459893167171,3.10669656543463,1.69107881605257,6.13017838780313,6.45288112782681,1.36115831840833,1.16243841129958,1.01373675294467,1.29092962510329,19.0098401872167,11.7442465756796,3.14059357073808,1.15212002503146,0.948033361884535,1.01362607645082,1.23253148597793,0.51968329191118,0.716106782669926,1.58945083825012,0.360586348559907,0.147689527174577,0.706765149637033,0.304827226619999,0.604957110821043,1.16949456887703,1.05833025804362,0.935015217452552,2.0405734525369,3.7737612073591,1.52513556236109,1.34307693091263,6.95482538515886,14.2638681342898,41.2091154601346,14.5770497773765,97.8065602868959,3.3885110557024,2.76195141904306,2.29158205375759,2.23409137046794,2.74033007908257,1.5107877947794,2.70009000092722,1.80128481289688,0.453142408984205,1.55328093525546,1.45302286617847,6.78342284781753,6.14640980714883,7.05009479498053,3.14419743941973,3.49302666055027,4.4449345560323,5.15087643097235,7.06022261101994,5.81203587056734,3.29523089857312,5.65879024158229,4.40115085108447,5.57018825922363,4.93945033018274,7.1444053692461,4.51948871184936,5.59436739344745,4.94503080963968,3.82717192349433,6.51451579532289,6.56660482789549,2.86123427936785,4.79643174886684,5.8347815857505,5.49994951295897,5.12198324043763,3.41990624869196,5.02475221229689,5.61142271657738,5.57584585183618,4.0386837773981,4.09231043169689,4.18329471202108,5.5942917184531,4.99621155875892,4.91256377735358,7.73535794573874,4.97349663378993,2.20591419119516,1.15933917810211
|short_description=p1@Glis3
}}

Revision as of 20:20, 3 August 2015

Short description:p1@Glis3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Glis3_5end
Coexpression cluster:NA
Association with transcript: -125bp_to_ENSMUST00000112612, ENSMUST00000162022, NM_175459, uc008hci.1, uc008hcj.1_5end
EntrezGene:226075
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Glis3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.35
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D913.08
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B325.51
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B721.12
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C219.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B829.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C349.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C423.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C448.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C822.47
Mouse Microglia, donor2.CNhs12634.11736-123E818.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F92.87
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G337.97
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I720.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I818.02
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H185.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I878.99
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B656.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.42
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.64
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.94
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D76.09
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C13.76
adrenal gland, neonate N25.CNhs11223.1377-27I33.27
amnion, adult pregnant day17.5.CNhs10488.583-22A86.43
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.50
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.73
epididymis, adult.CNhs10490.58-23B29.86
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H27.00
forelimb, embryo E13.CNhs10589.384-1E210.56
forelimb, embryo E14.CNhs10577.413-26A84.38
forelimb, embryo E15.CNhs11007.437-20E78.34
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I67.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F24.77
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I96.07
kidney, embryo E15.CNhs10997.434-16F811.42
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I220.16
kidney, embryo E18.CNhs11001.1288-20C719.40
kidney, neonate N00.CNhs11214.646-21G721.81
kidney, neonate N10.CNhs11206.758-6D536.87
kidney, neonate N20.CNhs11113.832-19I133.95
kidney, neonate N25.CNhs11122.1353-25F335.80
kidney, neonate N30.CNhs11203.1385-42H136.53
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B111.82
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F83.10
lung, embryo E15.CNhs11020.432-17C57.64
lung, embryo E16.CNhs10998.458-17B67.04
lung, embryo E17.CNhs10605.480-44A68.54
lung, embryo E18.CNhs10583.1287-20I610.47
lung, neonate N00.CNhs11224.640-42C610.15
lung, neonate N06.CNhs11212.683-20E58.99
lung, neonate N07.CNhs11111.715-19A39.74
lung, neonate N10.CNhs11219.750-23E65.90
lung, neonate N20.CNhs11109.822-18A47.37
lung, neonate N25.CNhs11119.1359-25C77.43
lung, neonate N30.CNhs11133.1394-42H28.82
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.36
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.69
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.91
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.72
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I712.35
ovary, embryo E18.CNhs11040.505-44H75.88
ovary, neonate N00.CNhs11217.1299-22I410.42
oviduct, adult pregnant day01.CNhs10500.988-6G615.34
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F413.84
pancreas, embryo E15.CNhs11042.1556-45F210.28
pancreas, embryo E16.CNhs11003.460-26E510.56
pancreas, embryo E17.CNhs10599.1558-45G310.63
pancreas, embryo E18.CNhs10580.1535-43I717.83
pancreas, neonate N00.CNhs11105.645-26G914.21
pancreas, neonate N01.CNhs11138.1531-43D716.72
pancreas, neonate N02.CNhs11139.1539-43D817.82
pancreas, neonate N16.CNhs11136.787-43B69.48
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G811.23
pituitary gland, embryo E12.CNhs11018.346-16E611.52
pituitary gland, embryo E13.CNhs11009.370-44C76.34
pituitary gland, embryo E14.CNhs11037.398-44A59.86
pituitary gland, embryo E15.CNhs10592.427-16B97.27
pituitary gland, embryo E16.CNhs11036.449-43F613.91
pituitary gland, embryo E17.CNhs11039.1265-44F521.39
pituitary gland, neonate N00.CNhs11190.1308-22E914.01
placenta, adult pregnant day10.CNhs10472.539-13I75.87
placenta, adult pregnant day17.CNhs10464.577-18G38.69
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H32.23
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G23.59
spleen, embryo E16.CNhs11035.461-43C111.56
spleen, embryo E18.CNhs11011.1271-21F212.22
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G86.30
stomach, embryo E16.CNhs11022.459-17D43.89
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B84.32
stomach, neonate N07.CNhs11210.718-18A94.55
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I15.18
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F56.13
testis, embryo E15.CNhs11034.443-27C56.45
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I419.01
testis, neonate N10.CNhs11204.763-44D911.74
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E46.95
uterus, adult pregnant day19.CNhs10497.590-15F514.26
uterus, adult.CNhs10509.92-27E541.21
vagina, adult.CNhs10502.89-27D514.58
vesicular gland, adult.CNhs10491.51-27F897.81
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H26.15
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.18
whole body, embryo E17.5.CNhs10513.490-9F95.59
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
renal system1.37e-0819
urinary system structure4.29e-0818
trunk6.16e-0890
kidney1.27e-0714
kidney mesenchyme1.27e-0714
upper urinary tract1.27e-0714
kidney rudiment1.27e-0714
kidney field1.27e-0714
trunk region element7.82e-0779
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:28754692..28754757,-&oldid=3698487"