FFCP PHASE1:Mm9::chr2:152315863..152315882,-: Difference between revisions
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{{FFCP|EntrezGene=442835|HGNC=|MCL_coexpression_id=9|UniProt=Q8BVC1|association_with_transcript=0bp_to_ENSMUST00000028966,NM_001002791,uc008nfn.1_5end|description=CAGE_peak_1_at_Defb22_5end|id=chr2:152315863..152315882,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001301!2.32e-14!3;UBERON:0006555!2.32e-14!3;UBERON:0005103!2.32e-14!3;UBERON:0000083!2.32e-14!3;UBERON:0009201!2.32e-14!3;UBERON:0004819!2.32e-14!3;UBERON:0006553!2.32e-14!3;UBERON:0003074!2.32e-14!3;UBERON:0003060!2.32e-14!3;UBERON:0000080!5.15e-11!4;UBERON:0005904!5.15e-11!4;UBERON:0006947!5.15e-11!4;UBERON:0002120!5.15e-11!4;UBERON:0004054!5.15e-11!4;UBERON:0004875!5.15e-11!4;UBERON:0004876!5.15e-11!4;UBERON:0005721!5.15e-11!4;UBERON:0005754!5.15e-11!4;UBERON:0007297!5.15e-11!4;UBERON:0004175!1.66e-10!9;UBERON:0000058!1.21e-07!6;UBERON:0003133!6.50e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.27e-20,3;UBERON:0006555,1.27e-20,3;UBERON:0005103,1.27e-20,3;UBERON:0000083,1.27e-20,3;UBERON:0009201,1.27e-20,3;UBERON:0004819,1.27e-20,3;UBERON:0006553,1.27e-20,3;UBERON:0003074,1.27e-20,3;UBERON:0003060,1.27e-20,3;UBERON:0000080,9.55e-16,4;UBERON:0005904,9.55e-16,4;UBERON:0006947,9.55e-16,4;UBERON:0002120,9.55e-16,4;UBERON:0004054,9.55e-16,4;UBERON:0004875,9.55e-16,4;UBERON:0004876,9.55e-16,4;UBERON:0005721,9.55e-16,4;UBERON:0005754,9.55e-16,4;UBERON:0007297,9.55e-16,4;UBERON:0003135,1.62e-09,15;UBERON:0000058,1.96e-09,7;UBERON:0003101,5.75e-09,16;UBERON:0000079,5.75e-09,16;UBERON:0001343,1.29e-08,2;UBERON:0004910,1.29e-08,2;UBERON:0004909,1.29e-08,2;UBERON:0005154,1.29e-08,2;UBERON:0005295,1.29e-08,2;UBERON:0005297,1.29e-08,2;UBERON:0005294,1.29e-08,2;UBERON:0010141,1.29e-08,2;UBERON:0005891,1.29e-08,2;UBERON:0004175,1.51e-07,9;UBERON:0003887,6.98e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,6.73684890342454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61254638281195,689.933130523932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01621004380506,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Defb22}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:442835 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BVC1 | |||
|association_with_transcript=0bp_to_ENSMUST00000028966,NM_001002791,uc008nfn.1_5end | |||
|cluster_id=chr2:152315863..152315882,- | |||
|description=CAGE_peak_1_at_Defb22_5end | |||
|id=chr2:152315863..152315882,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!2.32e-14!3;UBERON:0006555!2.32e-14!3;UBERON:0005103!2.32e-14!3;UBERON:0000083!2.32e-14!3;UBERON:0009201!2.32e-14!3;UBERON:0004819!2.32e-14!3;UBERON:0006553!2.32e-14!3;UBERON:0003074!2.32e-14!3;UBERON:0003060!2.32e-14!3;UBERON:0000080!5.15e-11!4;UBERON:0005904!5.15e-11!4;UBERON:0006947!5.15e-11!4;UBERON:0002120!5.15e-11!4;UBERON:0004054!5.15e-11!4;UBERON:0004875!5.15e-11!4;UBERON:0004876!5.15e-11!4;UBERON:0005721!5.15e-11!4;UBERON:0005754!5.15e-11!4;UBERON:0007297!5.15e-11!4;UBERON:0004175!1.66e-10!9;UBERON:0000058!1.21e-07!6;UBERON:0003133!6.50e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.27e-20,3;UBERON:0006555,1.27e-20,3;UBERON:0005103,1.27e-20,3;UBERON:0000083,1.27e-20,3;UBERON:0009201,1.27e-20,3;UBERON:0004819,1.27e-20,3;UBERON:0006553,1.27e-20,3;UBERON:0003074,1.27e-20,3;UBERON:0003060,1.27e-20,3;UBERON:0000080,9.55e-16,4;UBERON:0005904,9.55e-16,4;UBERON:0006947,9.55e-16,4;UBERON:0002120,9.55e-16,4;UBERON:0004054,9.55e-16,4;UBERON:0004875,9.55e-16,4;UBERON:0004876,9.55e-16,4;UBERON:0005721,9.55e-16,4;UBERON:0005754,9.55e-16,4;UBERON:0007297,9.55e-16,4;UBERON:0003135,1.62e-09,15;UBERON:0000058,1.96e-09,7;UBERON:0003101,5.75e-09,16;UBERON:0000079,5.75e-09,16;UBERON:0001343,1.29e-08,2;UBERON:0004910,1.29e-08,2;UBERON:0004909,1.29e-08,2;UBERON:0005154,1.29e-08,2;UBERON:0005295,1.29e-08,2;UBERON:0005297,1.29e-08,2;UBERON:0005294,1.29e-08,2;UBERON:0010141,1.29e-08,2;UBERON:0005891,1.29e-08,2;UBERON:0004175,1.51e-07,9;UBERON:0003887,6.98e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,6.73684890342454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61254638281195,689.933130523932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01621004380506,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Defb22 | |||
}} |
Revision as of 06:47, 4 August 2015
Short description: | p1@Defb22 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Defb22_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 0bp_to_ENSMUST00000028966, NM_001002791, uc008nfn.1_5end |
EntrezGene: | 442835 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 1.27e-20 | 3 |
excretory tube | 1.27e-20 | 3 |
mesonephric epithelium | 1.27e-20 | 3 |
mesonephric tubule | 1.27e-20 | 3 |
nephric duct | 1.27e-20 | 3 |
kidney epithelium | 1.27e-20 | 3 |
renal duct | 1.27e-20 | 3 |
mesonephric duct | 1.27e-20 | 3 |
pronephric duct | 1.27e-20 | 3 |
mesonephros | 9.55e-16 | 4 |
duct of male reproductive system | 9.55e-16 | 4 |
male genital duct | 9.55e-16 | 4 |
pronephros | 9.55e-16 | 4 |
internal male genitalia | 9.55e-16 | 4 |
nephrogenic cord | 9.55e-16 | 4 |
urogenital ridge | 9.55e-16 | 4 |
pronephric mesoderm | 9.55e-16 | 4 |
rostral part of nephrogenic cord | 9.55e-16 | 4 |
presumptive pronephric mesoderm | 9.55e-16 | 4 |
male reproductive organ | 1.62e-09 | 15 |
duct | 1.96e-09 | 7 |
male organism | 5.75e-09 | 16 |
male reproductive system | 5.75e-09 | 16 |
seminiferous tubule of testis | 1.29e-08 | 2 |
epithelium of male gonad | 1.29e-08 | 2 |
epithelium of gonad | 1.29e-08 | 2 |
epithelial cord | 1.29e-08 | 2 |
sex cord | 1.29e-08 | 2 |
testis sex cord | 1.29e-08 | 2 |
genital ridge | 1.29e-08 | 2 |
primitive sex cord of indifferent gonad | 1.29e-08 | 2 |
coelomic epithelium | 1.29e-08 | 2 |
internal genitalia | 1.51e-07 | 9 |
intraembryonic coelom | 6.98e-07 | 10 |