FFCP PHASE1:Hg19::chr7:44580861..44580912,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29881 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7898 | |||
|TSSclassifier=strong | |||
|UniProt=B7ZLE6 | |||
|association_with_transcript=0bp_to_ENST00000546276_5end | |||
|coexpression_cluster_id=C794 | |||
|description=CAGE_peak_1_at_NPC1L1_5end | |||
|id=chr7:44580861..44580912,- | |||
|ontology_enrichment_celltype=CL:1000507!5.08e-19!12;CL:1000494!5.08e-19!12;CL:1000497!4.81e-17!18;CL:0002518!4.81e-17!18;CL:0000181!8.02e-17!12;CL:0000417!8.02e-17!12;CL:0000668!8.02e-17!12;CL:0000414!8.02e-17!12;CL:0000412!8.02e-17!12;CL:0000182!8.02e-17!12;CL:1000449!1.79e-16!16;CL:0002681!5.27e-11!13;CL:0002584!5.27e-11!13;CL:0000239!2.37e-08!3;CL:1000615!2.37e-08!3;CL:0002306!2.37e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:1000507;4.84e-34;10!CL:1000494;4.84e-34;10!CL:0000182;1.17e-24;12!CL:1000449;3.39e-22;15!CL:1000497;2.09e-19;17!CL:0002518;2.09e-19;17!CL:0002681;3.42e-17;12!CL:0002584;3.42e-17;12!CL:0000239;4.71e-14;3!CL:1000615;4.71e-14;3!CL:0002306;4.71e-14;3!CL:0000650;1.05e-09;2!CL:1000500;1.05e-09;2!CL:1000618;1.05e-09;2!CL:1001318;1.05e-09;2!CL:0002173;1.05e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,6.04e-34,10;CL:1000494,6.04e-34,10;CL:0000182,1.17e-24,12;CL:1000449,3.92e-22,15;CL:1000497,2.37e-19,17;CL:0002518,2.37e-19,17;CL:0002681,3.88e-17,12;CL:0002584,3.88e-17,12;CL:0000239,4.60e-14,3;CL:1000615,4.60e-14,3;CL:0002306,4.60e-14,3;CL:0000650,1.26e-09,2;CL:1000500,1.26e-09,2;CL:1000618,1.26e-09,2;CL:1001318,1.26e-09,2;CL:0002173,1.26e-09,2;CL:0000223,2.71e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.53e-27;11!UBERON:0009497;1.97e-22;13!UBERON:0003104;4.87e-13;31!UBERON:0001041;6.23e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!6.15e-31!55;UBERON:0005173!6.15e-31!55;UBERON:0002417!4.82e-27!61;UBERON:0000916!4.82e-27!61;UBERON:0009773!5.08e-19!12;UBERON:0001231!5.08e-19!12;UBERON:0004810!5.08e-19!12;UBERON:0006555!2.76e-18!17;UBERON:0005103!2.76e-18!17;UBERON:0000083!2.76e-18!17;UBERON:0009201!2.76e-18!17;UBERON:0004819!2.76e-18!17;UBERON:0006553!2.76e-18!17;UBERON:0003074!2.76e-18!17;UBERON:0003060!2.76e-18!17;UBERON:0002107!6.73e-18!19;UBERON:0006925!6.73e-18!19;UBERON:0008836!6.73e-18!19;UBERON:0000489!1.93e-17!32;UBERON:0005177!1.98e-17!107;UBERON:0000080!4.19e-17!18;UBERON:0002120!4.19e-17!18;UBERON:0004875!4.19e-17!18;UBERON:0005721!4.19e-17!18;UBERON:0005754!4.19e-17!18;UBERON:0007297!4.19e-17!18;UBERON:0003887!1.05e-16!21;UBERON:0002113!1.16e-16!27;UBERON:0003918!1.16e-16!27;UBERON:0005095!1.16e-16!27;UBERON:0007687!1.16e-16!27;UBERON:0004211!1.79e-16!16;UBERON:0001285!1.79e-16!16;UBERON:0007684!1.79e-16!16;UBERON:0003220!1.79e-16!16;UBERON:0004208!1.79e-16!16;UBERON:0009497!3.21e-15!25;UBERON:0000015!3.21e-15!25;UBERON:0002423!3.21e-15!25;UBERON:0006235!3.21e-15!25;UBERON:0004161!3.21e-15!25;UBERON:0004876!4.25e-15!20;UBERON:0008835!5.04e-15!22;UBERON:0003894!5.04e-15!22;UBERON:0005057!2.83e-14!26;UBERON:0009854!3.10e-14!23;UBERON:0009569!9.52e-14!113;UBERON:0007499!7.58e-13!25;UBERON:0000466!2.55e-12!126;UBERON:0009856!3.10e-12!26;UBERON:0006554!1.44e-11!44;UBERON:0001008!3.25e-11!45;UBERON:0001225!5.27e-11!13;UBERON:0008987!5.27e-11!13;UBERON:0000058!5.99e-11!26;UBERON:0000353!3.65e-10!17;UBERON:0002365!8.95e-10!31;UBERON:0002330!8.95e-10!31;UBERON:0003064!1.46e-09!37;UBERON:0003886!8.42e-09!63;UBERON:0001851!1.17e-08!16;UBERON:0003929!1.38e-08!54;UBERON:0004921!1.59e-08!129;UBERON:0004185!1.59e-08!129;UBERON:0006853!2.37e-08!3;UBERON:0007685!2.37e-08!3;UBERON:0004134!2.37e-08!3;UBERON:0002368!2.52e-08!35;UBERON:0003914!1.21e-07!118;UBERON:0003103!1.32e-07!69;UBERON:0005409!1.62e-07!35;UBERON:0002553!1.79e-07!70;UBERON:0000949!6.01e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.84e-34;10!UBERON:0009773;4.84e-34;10!UBERON:0001231;4.84e-34;10!UBERON:0004810;4.84e-34;10!UBERON:0002107;2.02e-28;19!UBERON:0006925;2.02e-28;19!UBERON:0002423;4.21e-25;25!UBERON:0005172;1.23e-23;52!UBERON:0005173;1.23e-23;52!UBERON:0006555;3.39e-22;15!UBERON:0004819;3.39e-22;15!UBERON:0001285;3.39e-22;15!UBERON:0007684;3.39e-22;15!UBERON:0001225;3.42e-17;12!UBERON:0008987;3.42e-17;12!UBERON:0002417;1.22e-16;58!UBERON:0000916;1.22e-16;58!UBERON:0002113;2.13e-16;24!UBERON:0011143;2.13e-16;24!UBERON:0002365;3.01e-16;31!UBERON:0002330;3.01e-16;31!UBERON:0000160;1.77e-15;17!UBERON:0005409;6.18e-15;22!UBERON:0002368;2.91e-14;33!UBERON:0006853;4.71e-14;3!UBERON:0007685;4.71e-14;3!UBERON:0004134;4.71e-14;3!UBERON:0001851;1.41e-13;15!UBERON:0000353;1.41e-13;15!UBERON:0000489;2.94e-13;29!UBERON:0006554;9.34e-13;30!UBERON:0001008;9.34e-13;30!UBERON:0000949;1.69e-10;43!UBERON:0001007;4.26e-10;81!UBERON:0003567;1.05e-09;2!UBERON:0003838;1.05e-09;2!UBERON:0003586;1.05e-09;2!UBERON:0005169;1.05e-09;2!UBERON:0002321;1.05e-09;2!UBERON:0005215;1.05e-09;2!UBERON:0002303;1.05e-09;2!UBERON:0002319;1.05e-09;2!UBERON:0002108;2.81e-09;4!UBERON:0004921;2.86e-09;33!UBERON:0005177;1.06e-07;99!UBERON:0000059;8.16e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,5.26e-36,54;UBERON:0005173,5.26e-36,54;UBERON:0004810,6.04e-34,10;UBERON:0002417,6.95e-32,60;UBERON:0000916,6.95e-32,60;UBERON:0002107,1.91e-28,19;UBERON:0006925,1.91e-28,19;UBERON:0008836,1.91e-28,19;UBERON:0009497,4.03e-25,25;UBERON:0000015,4.03e-25,25;UBERON:0002423,4.03e-25,25;UBERON:0006235,4.03e-25,25;UBERON:0004161,4.03e-25,25;UBERON:0008835,2.98e-24,22;UBERON:0003894,2.98e-24,22;UBERON:0009854,4.26e-23,23;UBERON:0004211,3.92e-22,15;UBERON:0009773,3.92e-22,15;UBERON:0001231,3.92e-22,15;UBERON:0001285,3.92e-22,15;UBERON:0007684,3.92e-22,15;UBERON:0004208,3.92e-22,15;UBERON:0007499,4.59e-21,25;UBERON:0006555,1.18e-20,16;UBERON:0004819,1.18e-20,16;UBERON:0009856,3.63e-20,26;UBERON:0005177,1.35e-18,101;UBERON:0001225,3.88e-17,12;UBERON:0008987,3.88e-17,12;UBERON:0002365,1.52e-16,31;UBERON:0002330,1.52e-16,31;UBERON:0003929,2.10e-16,54;UBERON:0000160,1.67e-15,17;UBERON:0002113,5.67e-15,26;UBERON:0003918,5.67e-15,26;UBERON:0011143,5.67e-15,26;UBERON:0005095,5.67e-15,26;UBERON:0007687,5.67e-15,26;UBERON:0009569,1.07e-14,112;UBERON:0002368,2.16e-14,35;UBERON:0006853,4.60e-14,3;UBERON:0007685,4.60e-14,3;UBERON:0004134,4.60e-14,3;UBERON:0001851,1.56e-13,15;UBERON:0000353,1.56e-13,15;UBERON:0005409,4.75e-13,25;UBERON:0000949,1.06e-12,45;UBERON:0004921,1.39e-12,118;UBERON:0003914,1.86e-12,117;UBERON:0000489,2.89e-12,31;UBERON:0003104,4.08e-12,160;UBERON:0009142,4.08e-12,160;UBERON:0001007,1.63e-10,145;UBERON:0001555,1.63e-10,145;UBERON:0007026,1.63e-10,145;UBERON:0005911,1.16e-09,82;UBERON:0003567,1.26e-09,2;UBERON:0003838,1.26e-09,2;UBERON:0003586,1.26e-09,2;UBERON:0005169,1.26e-09,2;UBERON:0002321,1.26e-09,2;UBERON:0005215,1.26e-09,2;UBERON:0002303,1.26e-09,2;UBERON:0002319,1.26e-09,2;UBERON:0002108,2.85e-09,4;UBERON:0006554,3.81e-09,47;UBERON:0002530,3.91e-09,59;UBERON:0004119,4.47e-09,160;UBERON:0000925,4.47e-09,160;UBERON:0006595,4.47e-09,160;UBERON:0001008,6.51e-09,48;UBERON:0002100,9.54e-08,199;UBERON:0000059,7.73e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,2.8810180793198,0,58.3073160180422,39.313088667105,49.6263521612379,0,22.5068842533898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,4.71351853407327,0,0,0,0,0,3.60959690325929,2.0794141018192,0.784349769176855,1.46139224653261,2.42768746453614,0,0,0.215915916102139,0,1.08378575017541,3.51182841698397,2.80363900349542,5.81753206250107,5.59686886805446,0,0,0,0,0,20.6082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.2053353584629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,99.5587674971729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.612099375548,0,1.35393286007176,0,0,0,0,0.0986434056369336,0,0,5.81599647657131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0.635746315921515,0,0.163232808159148,9.04659657177221,0,0,71.473712118698,1.83309043480088,0,0,0,0,0,0,0,0,0,0,12.0990716048664,0,0.063186579628488,0,0,0,0,0,0,8.25367683486399,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,17.0762395791482,0,0,0,16.4731197947486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,33.7838253629616,21.8229414991009,18.2139047022378,18.6707816476092,26.2801375644379,0.0846733320657845,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.630445658393585,1.78345599658994,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,36.0518494848083,34.4517911171775,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919036730290385,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65263488203798,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671132590786754,0.098150233615243,94.4863918612588,0,0,0,1.45713297917742,0,0.795803100645473,0,0,0,0,125.099310292978,34.0952914386173,0,0,0,0,0,0.4226557275834,0,0,0.193373663920732,0,0,0,0,9.49437304720472,0,0,0,0,0,7.93540260773101,0,0,0,0.126166424835079,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@NPC1L1 | |||
}} |
Revision as of 16:49, 22 January 2014
Short description: | p1@NPC1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NPC1L1_5end |
Coexpression cluster: | C794_small_signet_adenocarcinoma_colon_Hepatocyte_gall_liver |
Association with transcript: | 0bp_to_ENST00000546276_5end |
EntrezGene: | NPC1L1 |
HGNC: | 7898 |
UniProt: | B7ZLE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 6.04e-34 | 10 |
nephron tubule epithelial cell | 6.04e-34 | 10 |
hepatocyte | 1.17e-24 | 12 |
epithelial cell of nephron | 3.92e-22 | 15 |
kidney cell | 2.37e-19 | 17 |
kidney epithelial cell | 2.37e-19 | 17 |
kidney cortical cell | 3.88e-17 | 12 |
renal cortical epithelial cell | 3.88e-17 | 12 |
brush border epithelial cell | 4.60e-14 | 3 |
kidney cortex tubule cell | 4.60e-14 | 3 |
epithelial cell of proximal tubule | 4.60e-14 | 3 |
mesangial cell | 1.26e-09 | 2 |
kidney interstitial cell | 1.26e-09 | 2 |
juxtaglomerular complex cell | 1.26e-09 | 2 |
renal interstitial pericyte | 1.26e-09 | 2 |
extraglomerular mesangial cell | 1.26e-09 | 2 |
endodermal cell | 2.71e-09 | 58 |