FFCP PHASE1:Hg19::chrX:47895575..47895589,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chrX:47895575..47895589,+ | |||
|id=chrX:47895575..47895589,+ | |||
|ontology_enrichment_celltype=CL:0000746!1.16e-10!3;CL:0000513!1.16e-10!3;CL:0002557!2.50e-08!1;CL:0000737!3.33e-08!4;CL:0002494!2.33e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000746;1.36e-44;3!CL:0000737;9.09e-34;4!CL:0002494;2.65e-19;16!CL:0002548;7.80e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.91e-44,3;CL:0000513,1.91e-44,3;CL:0000737,1.17e-33,4;CL:0002494,2.82e-19,16;CL:0002548,7.58e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000513;1.36e-44;3 | |||
|ontology_enrichment_disease=DOID:171!1.46e-11!10;DOID:9119!2.69e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:171;3.97e-14;10!DOID:3095;5.91e-07;22!DOID:2994;5.91e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.71e-14,10;DOID:3095,5.74e-07,22;DOID:2994,5.74e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000948!1.64e-13!24;UBERON:0005498!1.64e-13!24;UBERON:0004140!1.64e-13!24;UBERON:0009881!1.64e-13!24;UBERON:0004141!1.64e-13!24;UBERON:0003084!1.64e-13!24;UBERON:0007005!1.64e-13!24;UBERON:0004139!1.64e-13!24;UBERON:0004291!1.64e-13!24;UBERON:0007100!6.41e-12!27;UBERON:0002146!3.57e-08!1;UBERON:0005623!3.57e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.38e-33;4!UBERON:0000923;1.38e-33;4!UBERON:0010316;1.38e-33;4!UBERON:0005291;1.38e-33;4!UBERON:0002050;4.06e-27;5!UBERON:0005423;4.06e-27;5!UBERON:0000948;2.85e-14;22!UBERON:0007100;1.18e-12;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,3.94e-13,24;UBERON:0005498,3.94e-13,24;UBERON:0004140,3.94e-13,24;UBERON:0009881,3.94e-13,24;UBERON:0004141,3.94e-13,24;UBERON:0003084,3.94e-13,24;UBERON:0007005,3.94e-13,24;UBERON:0004139,3.94e-13,24;UBERON:0004291,3.94e-13,24;UBERON:0007100,9.28e-12,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.2786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48968828319813,0,0.326923806226917,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,12.1746798743883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,1.3578602396322,0,1.61116493536703,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:47895575..47895589,+ | |||
}} |
Revision as of 05:33, 23 January 2014
Short description: | p@chrX:47895575..47895589, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:47895575..47895589, + |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.91e-44 | 3 |
cardiac muscle myoblast | 1.91e-44 | 3 |
striated muscle cell | 1.17e-33 | 4 |
cardiocyte | 2.82e-19 | 16 |
cardiac fibroblast | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
heart | 3.94e-13 | 24 |
primitive heart tube | 3.94e-13 | 24 |
primary heart field | 3.94e-13 | 24 |
anterior lateral plate mesoderm | 3.94e-13 | 24 |
heart tube | 3.94e-13 | 24 |
heart primordium | 3.94e-13 | 24 |
cardiac mesoderm | 3.94e-13 | 24 |
cardiogenic plate | 3.94e-13 | 24 |
heart rudiment | 3.94e-13 | 24 |
primary circulatory organ | 9.28e-12 | 27 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.71e-14 | 10 |
germ cell and embryonal cancer | 5.74e-07 | 22 |
germ cell cancer | 5.74e-07 | 22 |