FFCP PHASE1:Mm9::chr9:108855642..108855654,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12836|HGNC=|UniProt=Q63870|association_with_transcript=11bp_to_ENSMUST00000112070_5end|description=CAGE_peak_2_at_Col7a1_5end|id=chr9:108855642..108855654,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000464!2.49e-07!57;UBERON:0002553!3.32e-07!39;UBERON:0003886!7.57e-07!38;UBERON:0001264!9.80e-07!12;UBERON:0003922!9.80e-07!12;UBERON:0002114!9.80e-07!12;UBERON:0003923!9.80e-07!12;UBERON:0003924!9.80e-07!12;UBERON:0003921!9.80e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000014,6.41e-08,5;UBERON:0001003,6.41e-08,5;UBERON:0002097,6.41e-08,5;UBERON:0002199,6.41e-08,5;UBERON:0007029,6.41e-08,5;UBERON:0007376,6.41e-08,5;UBERON:0002416,6.41e-08,5;UBERON:0007383,6.41e-08,5;UBERON:0003102,1.25e-07,22|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0.878744730937887,1.94429899074283,1.39986421625363,2.87505128729943,0,0,0,1.02903774414379,0.286533439938757,0.515672092277442,0,0,0,11.8595586224196,4.4464739805557,0,0,0,1.49800055259202,0,0.103689612308478,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427115042397309,0,0.605809546665472,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46385665617943,5.32055717497707,3.0331466700887,0.22836775943812,0,0.29688427812965,0,0,0,0.301445281105245,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0.497627882440372,0.758168275301024,0,0,1.14951052216736,1.0803727788321,0.90422890701429,1.29269348387523,0.640568601424249,0.655912071918102,0.517406741478031,0,0.567318240503458,1.05570674498369,1.09597866213787,1.94633074457919,3.1342694986995,4.7329891373827,0.59710280045548,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0.898819408654221,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.49095073923223,0.252946148497029,0,0.470996183524124,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0,0,0.369506380333209,0.189491411770485,0,0,0.234690248288502,0.335012514883631,0,0.585400943573396,0,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0.491764273019036,0.827810238914197,0,0.117211686592203,0,0,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0,0,0.712262414669021,2.44330439030364,4.61916344323099,6.63725691699814,0.485561272309963,2.41858845571801,0.565815239267694,1.47650946440386,1.22974059177571,0.258428293168221,1.09060118843252,0.356497378384721,3.16036757935816,4.21674434299995,8.25084345985495,0,0,0,0.214337035031592,0,0,0,0,0,0,0.441056796109924,2.63818004706368,10.0107944551461,3.98065304525829,5.13301079213487,2.29797259643086,0.291480836629851,0,0.170870880797853,2.27025554759545,2.59272338317596,0.188368457004691,0,0.457556346413045,0,0,0,0,0,0.203319467126849,0.648032044930808,1.25452977608681,1.09181281873089,1.07891477107857,0.991841468704031,0.26175594198403,0.259229946583586,1.24267862617385,0,0.448549638131936,0.165458490457098,0.194451188344048,0,0,0.234714477291508,0.2604087696879,0.209718688851422,0,0.288030006257865,0.316011120628178,0,0.308132871494482,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,1.81384306892169,0,0,0.335769232728157,0,1.12609485270709,0.915758121336325,10.5040505748742,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,3.64660075602441,0,0,0.666740183404846,2.06035057238894,1.28367683836726,2.02157769411038,1.52087579934144,2.07488975524684,1.68554713445788,1.6646539625266,1.7230640686684,1.90517476513229,2.20180219295225,0.964546102318525,2.47251540481984,2.06078488188156,2.05721551431249,2.30718548007139,2.14592570952589,1.74415699958794,1.59985946706062,1.4384483341585,2.19513567447327,1.31534855718921,1.62964936615034,0.561142271657738,2.01679530811096,2.1670986122624,1.63692417267876,2.01417893541756,3.2794123866794,3.74715866906919,2.10538447600868,1.93383948643468,1.53030665655075,0.441182838239031,0|short_description=p2@Col7a1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12836 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q63870 | |||
|association_with_transcript=11bp_to_ENSMUST00000112070_5end | |||
|cluster_id=chr9:108855642..108855654,+ | |||
|description=CAGE_peak_2_at_Col7a1_5end | |||
|id=chr9:108855642..108855654,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!2.49e-07!57;UBERON:0002553!3.32e-07!39;UBERON:0003886!7.57e-07!38;UBERON:0001264!9.80e-07!12;UBERON:0003922!9.80e-07!12;UBERON:0002114!9.80e-07!12;UBERON:0003923!9.80e-07!12;UBERON:0003924!9.80e-07!12;UBERON:0003921!9.80e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,6.41e-08,5;UBERON:0001003,6.41e-08,5;UBERON:0002097,6.41e-08,5;UBERON:0002199,6.41e-08,5;UBERON:0007029,6.41e-08,5;UBERON:0007376,6.41e-08,5;UBERON:0002416,6.41e-08,5;UBERON:0007383,6.41e-08,5;UBERON:0003102,1.25e-07,22 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0.878744730937887,1.94429899074283,1.39986421625363,2.87505128729943,0,0,0,1.02903774414379,0.286533439938757,0.515672092277442,0,0,0,11.8595586224196,4.4464739805557,0,0,0,1.49800055259202,0,0.103689612308478,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427115042397309,0,0.605809546665472,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46385665617943,5.32055717497707,3.0331466700887,0.22836775943812,0,0.29688427812965,0,0,0,0.301445281105245,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0.497627882440372,0.758168275301024,0,0,1.14951052216736,1.0803727788321,0.90422890701429,1.29269348387523,0.640568601424249,0.655912071918102,0.517406741478031,0,0.567318240503458,1.05570674498369,1.09597866213787,1.94633074457919,3.1342694986995,4.7329891373827,0.59710280045548,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0.898819408654221,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.49095073923223,0.252946148497029,0,0.470996183524124,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0,0,0.369506380333209,0.189491411770485,0,0,0.234690248288502,0.335012514883631,0,0.585400943573396,0,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0.491764273019036,0.827810238914197,0,0.117211686592203,0,0,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0,0,0.712262414669021,2.44330439030364,4.61916344323099,6.63725691699814,0.485561272309963,2.41858845571801,0.565815239267694,1.47650946440386,1.22974059177571,0.258428293168221,1.09060118843252,0.356497378384721,3.16036757935816,4.21674434299995,8.25084345985495,0,0,0,0.214337035031592,0,0,0,0,0,0,0.441056796109924,2.63818004706368,10.0107944551461,3.98065304525829,5.13301079213487,2.29797259643086,0.291480836629851,0,0.170870880797853,2.27025554759545,2.59272338317596,0.188368457004691,0,0.457556346413045,0,0,0,0,0,0.203319467126849,0.648032044930808,1.25452977608681,1.09181281873089,1.07891477107857,0.991841468704031,0.26175594198403,0.259229946583586,1.24267862617385,0,0.448549638131936,0.165458490457098,0.194451188344048,0,0,0.234714477291508,0.2604087696879,0.209718688851422,0,0.288030006257865,0.316011120628178,0,0.308132871494482,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,1.81384306892169,0,0,0.335769232728157,0,1.12609485270709,0.915758121336325,10.5040505748742,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,3.64660075602441,0,0,0.666740183404846,2.06035057238894,1.28367683836726,2.02157769411038,1.52087579934144,2.07488975524684,1.68554713445788,1.6646539625266,1.7230640686684,1.90517476513229,2.20180219295225,0.964546102318525,2.47251540481984,2.06078488188156,2.05721551431249,2.30718548007139,2.14592570952589,1.74415699958794,1.59985946706062,1.4384483341585,2.19513567447327,1.31534855718921,1.62964936615034,0.561142271657738,2.01679530811096,2.1670986122624,1.63692417267876,2.01417893541756,3.2794123866794,3.74715866906919,2.10538447600868,1.93383948643468,1.53030665655075,0.441182838239031,0 | |||
|short_description=p2@Col7a1 | |||
}} |
Revision as of 14:07, 4 August 2015
Short description: | p2@Col7a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Col7a1_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENSMUST00000112070_5end |
EntrezGene: | 12836 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 6.41e-08 | 5 |
skin epidermis | 6.41e-08 | 5 |
skin of body | 6.41e-08 | 5 |
integument | 6.41e-08 | 5 |
surface | 6.41e-08 | 5 |
outer epithelium | 6.41e-08 | 5 |
integumental system | 6.41e-08 | 5 |
enveloping layer of ectoderm | 6.41e-08 | 5 |
surface structure | 1.25e-07 | 22 |