FFCP PHASE1:Mm9::chrX:50265385..50265397,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=70998|HGNC=|MCL_coexpression_id=7|UniProt=Q9D4J7|association_with_transcript=-45bp_to_ENSMUST00000078944,NM_027642,uc009ten.1,uc009teo.1,uc009tep.1,uc009teq.1_5end|description=CAGE_peak_2_at_Phf6_5end|id=chrX:50265385..50265397,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000893,3.20e-08,6;CL:0002489,3.20e-08,6;CL:0000898,3.20e-08,6;CL:0000809,3.20e-08,6;CL:0000810,3.20e-08,6;CL:0000895,3.20e-08,6;CL:0000808,3.20e-08,6;CL:0000894,3.20e-08,6;CL:0000806,3.20e-08,6;CL:0000807,3.20e-08,6;CL:0000805,3.20e-08,6;CL:0002425,3.20e-08,6;CL:0002436,3.20e-08,6;CL:0002427,3.20e-08,6;CL:0002428,3.20e-08,6;CL:0002429,3.20e-08,6;CL:0002433,3.20e-08,6;CL:0002431,3.20e-08,6;CL:0002432,3.20e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.480446541314382,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0.700837921786577,0.129123323441576,34.4932369271583,30.4283884218592,5.30775701499065,8.05698805852898,0.684802919724823,0.174840804837995,0.999329285446988,0.404950534779652,0,0.473193248037357,0.411343300817216,0.84877930359606,1.53077922271926,0.397163804803541,0.522399578277871,0.159992422793407,0.22940928106717,0,0.86152399231815,0,0,0,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0.734187008646726,0,0.218025156380447,0.439372365468944,0,0.139986421625363,0,0.503347818173209,0.725362142011344,0.672187598284928,0.514518872071894,0.573066879877513,0.515672092277442,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,1.24427534770173,0.540023753326763,1.05162480675691,0,0,0.734944795289724,0.191690942036473,0.919218786610021,1.10115880999389,0.127687338085188,0.153606533256243,0.131886287730194,0.182975287204819,0.52091337055676,0.837548997004143,0.56276261003168,0,0.589257170947335,0.427115042397309,0.372798891650601,0.605809546665472,0.755715601067855,0.289864488701678,0,0,0,0.649776417447669,0,0.140444420131752,0.340860645156116,0.259786004602869,0,0.281686839553361,0,0,0,0.432982082022428,0.506719730950197,0,0,0.517875767294343,0.29688427812965,0,0.304465478312141,0.230615497256059,0.60289056221049,0,0.251333182659351,0.247194967734374,0.433798070759735,0,0.485300549842228,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0,0.599902730993408,0.508280908292259,0.299581278809645,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,0.20778804455956,0,0.509196819251581,0.373220911830279,0.252722758433675,0.420883711772948,0.390361328888111,1.60931473103431,0.180062129805349,1.05493372485001,0.408218994907967,0.512454881139399,0.281105173679186,0.517406741478031,1.07783996466421,1.13463648100692,1.40760899331159,1.53437012699302,0,0.696504333044333,0.823128545631774,1.19420560091096,0,0.257347907114715,0.284163499395593,0.414251545071004,0.938104239924385,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.329119699826961,0,0,0,0,0.134206418760372,0.210289948564127,0.411618449517138,0,0.264450566663544,0.639864751605702,0.696710015581316,0.77320476793256,0.201683524623343,0.444756087689741,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,1.02823661348756,0,0.203651327845314,0.193952487167626,0.280543279561274,0.758838445491087,0.147610147979602,0.156998727841375,0.616985819609003,0,0.667380422864376,0,0.224862112384854,0.202860121388503,0.482354319504834,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,0.554259570499814,1.32643988239339,1.14075483509418,1.01847051465113,0.704070744865506,0.167506257441816,0.714130922658041,0.390267295715598,0.315270288212382,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0,0.160550589987792,0,0.655739781506702,0,0.631016438832513,0.390438744296638,1.29254038639679,1.91175038362042,1.11399337041197,0,0.404810701674894,0.876767573733936,1.58115111178609,0.321321316421807,0.425820255624806,0.35613120733451,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,1.08036656418786,0.258717367565509,1.07168517515796,0.532020700926821,0.713475270408282,0.329098041204242,0,0,0.21183207086382,0.220528398054962,0,0.161464426695906,0.180938774784468,0,0.164140899745061,0,0,0.341741761595705,0.206386867963223,0.370389054739423,0.376736914009382,0.410082683163076,0.228778173206523,0.509935289981566,0.139951452323658,0.552799895217695,0,1.10717597753397,0.609958401380546,0.216010681643603,0.627264888043406,0.436725127492355,0,0.165306911450672,0.26175594198403,0.259229946583586,0,5.07323644815771,0.299033092087958,0.165458490457098,0.777804753376191,0.645799117388655,0.675824501963113,0.58678619322877,0.13020438484395,0.419437377702843,1.69108884578204,5.47257011889944,1.26404448251271,0.810900861160657,0.308132871494482,0.389762468933385,0.716106782669926,1.19208812868759,0.120195449519969,0.443068581523732,0.504832249740738,0.228620419965,0.705783295957884,0.38983152295901,0.962118416403295,0.467507608726276,0,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,0,0.183151624267265,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,1.86817225651518,1.19707462020309,0.682934423016537,0.972426868273176,1.46729213839588,0.183843508450014,0.666740183404846,0.618105171716683,0.320919209591815,0.252697211763798,0,0.565879024158229,0.37456602987953,0.320125762024346,0.287177344778066,0,0.463537303779422,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.197008964751127,0.409231043169689,0.154936841185966,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0,0.695603506861264|short_description=p2@Phf6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70998 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D4J7 | |||
|association_with_transcript=-45bp_to_ENSMUST00000078944,NM_027642,uc009ten.1,uc009teo.1,uc009tep.1,uc009teq.1_5end | |||
|cluster_id=chrX:50265385..50265397,+ | |||
|description=CAGE_peak_2_at_Phf6_5end | |||
|id=chrX:50265385..50265397,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,3.20e-08,6;CL:0002489,3.20e-08,6;CL:0000898,3.20e-08,6;CL:0000809,3.20e-08,6;CL:0000810,3.20e-08,6;CL:0000895,3.20e-08,6;CL:0000808,3.20e-08,6;CL:0000894,3.20e-08,6;CL:0000806,3.20e-08,6;CL:0000807,3.20e-08,6;CL:0000805,3.20e-08,6;CL:0002425,3.20e-08,6;CL:0002436,3.20e-08,6;CL:0002427,3.20e-08,6;CL:0002428,3.20e-08,6;CL:0002429,3.20e-08,6;CL:0002433,3.20e-08,6;CL:0002431,3.20e-08,6;CL:0002432,3.20e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0.700837921786577,0.129123323441576,34.4932369271583,30.4283884218592,5.30775701499065,8.05698805852898,0.684802919724823,0.174840804837995,0.999329285446988,0.404950534779652,0,0.473193248037357,0.411343300817216,0.84877930359606,1.53077922271926,0.397163804803541,0.522399578277871,0.159992422793407,0.22940928106717,0,0.86152399231815,0,0,0,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0.734187008646726,0,0.218025156380447,0.439372365468944,0,0.139986421625363,0,0.503347818173209,0.725362142011344,0.672187598284928,0.514518872071894,0.573066879877513,0.515672092277442,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,1.24427534770173,0.540023753326763,1.05162480675691,0,0,0.734944795289724,0.191690942036473,0.919218786610021,1.10115880999389,0.127687338085188,0.153606533256243,0.131886287730194,0.182975287204819,0.52091337055676,0.837548997004143,0.56276261003168,0,0.589257170947335,0.427115042397309,0.372798891650601,0.605809546665472,0.755715601067855,0.289864488701678,0,0,0,0.649776417447669,0,0.140444420131752,0.340860645156116,0.259786004602869,0,0.281686839553361,0,0,0,0.432982082022428,0.506719730950197,0,0,0.517875767294343,0.29688427812965,0,0.304465478312141,0.230615497256059,0.60289056221049,0,0.251333182659351,0.247194967734374,0.433798070759735,0,0.485300549842228,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0,0.599902730993408,0.508280908292259,0.299581278809645,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,0.20778804455956,0,0.509196819251581,0.373220911830279,0.252722758433675,0.420883711772948,0.390361328888111,1.60931473103431,0.180062129805349,1.05493372485001,0.408218994907967,0.512454881139399,0.281105173679186,0.517406741478031,1.07783996466421,1.13463648100692,1.40760899331159,1.53437012699302,0,0.696504333044333,0.823128545631774,1.19420560091096,0,0.257347907114715,0.284163499395593,0.414251545071004,0.938104239924385,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.329119699826961,0,0,0,0,0.134206418760372,0.210289948564127,0.411618449517138,0,0.264450566663544,0.639864751605702,0.696710015581316,0.77320476793256,0.201683524623343,0.444756087689741,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,1.02823661348756,0,0.203651327845314,0.193952487167626,0.280543279561274,0.758838445491087,0.147610147979602,0.156998727841375,0.616985819609003,0,0.667380422864376,0,0.224862112384854,0.202860121388503,0.482354319504834,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,0.554259570499814,1.32643988239339,1.14075483509418,1.01847051465113,0.704070744865506,0.167506257441816,0.714130922658041,0.390267295715598,0.315270288212382,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0,0.160550589987792,0,0.655739781506702,0,0.631016438832513,0.390438744296638,1.29254038639679,1.91175038362042,1.11399337041197,0,0.404810701674894,0.876767573733936,1.58115111178609,0.321321316421807,0.425820255624806,0.35613120733451,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,1.08036656418786,0.258717367565509,1.07168517515796,0.532020700926821,0.713475270408282,0.329098041204242,0,0,0.21183207086382,0.220528398054962,0,0.161464426695906,0.180938774784468,0,0.164140899745061,0,0,0.341741761595705,0.206386867963223,0.370389054739423,0.376736914009382,0.410082683163076,0.228778173206523,0.509935289981566,0.139951452323658,0.552799895217695,0,1.10717597753397,0.609958401380546,0.216010681643603,0.627264888043406,0.436725127492355,0,0.165306911450672,0.26175594198403,0.259229946583586,0,5.07323644815771,0.299033092087958,0.165458490457098,0.777804753376191,0.645799117388655,0.675824501963113,0.58678619322877,0.13020438484395,0.419437377702843,1.69108884578204,5.47257011889944,1.26404448251271,0.810900861160657,0.308132871494482,0.389762468933385,0.716106782669926,1.19208812868759,0.120195449519969,0.443068581523732,0.504832249740738,0.228620419965,0.705783295957884,0.38983152295901,0.962118416403295,0.467507608726276,0,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,0,0.183151624267265,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,1.86817225651518,1.19707462020309,0.682934423016537,0.972426868273176,1.46729213839588,0.183843508450014,0.666740183404846,0.618105171716683,0.320919209591815,0.252697211763798,0,0.565879024158229,0.37456602987953,0.320125762024346,0.287177344778066,0,0.463537303779422,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.197008964751127,0.409231043169689,0.154936841185966,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0,0.695603506861264 | |||
|short_description=p2@Phf6 | |||
}} |
Revision as of 07:54, 6 August 2015
Short description: | p2@Phf6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Phf6_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -45bp_to_ENSMUST00000078944, NM_027642, uc009ten.1, uc009teo.1, uc009tep.1, uc009teq.1_5end |
EntrezGene: | 70998 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 3.20e-08 | 6 |
double negative thymocyte | 3.20e-08 | 6 |
naive T cell | 3.20e-08 | 6 |
double-positive, alpha-beta thymocyte | 3.20e-08 | 6 |
CD4-positive, alpha-beta thymocyte | 3.20e-08 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.20e-08 | 6 |
DN4 thymocyte | 3.20e-08 | 6 |
DN1 thymic pro-T cell | 3.20e-08 | 6 |
DN2 thymocyte | 3.20e-08 | 6 |
DN3 thymocyte | 3.20e-08 | 6 |
immature single positive thymocyte | 3.20e-08 | 6 |
early T lineage precursor | 3.20e-08 | 6 |
mature CD4 single-positive thymocyte | 3.20e-08 | 6 |
resting double-positive thymocyte | 3.20e-08 | 6 |
double-positive blast | 3.20e-08 | 6 |
CD69-positive double-positive thymocyte | 3.20e-08 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 3.20e-08 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.20e-08 | 6 |
CD24-positive, CD4 single-positive thymocyte | 3.20e-08 | 6 |