CL:1000746: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=glomerular cell | |name=glomerular cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000074 | |part_of=UBERON:0000074 | ||
Latest revision as of 16:47, 12 September 2014
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:1000612(kidney corpuscule cell) |
|---|---|
| part_of: | UBERON:0000074(renal glomerulus) |
Children
| is a: | CL:0002188 (glomerular endothelial cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11675-122H1 (Renal Glomerular Endothelial Cells, donor3)
- 11679-122H5 (Renal Mesangial Cells, donor3)
- 11783-124B1 (Renal Glomerular Endothelial Cells, donor4)
Mouse (Mus musculus)
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11675-122H1 (Renal Glomerular Endothelial Cells, donor3)
- 11679-122H5 (Renal Mesangial Cells, donor3)
- 11783-124B1 (Renal Glomerular Endothelial Cells, donor4)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000746 (glomerular cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 6.87e-64 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_a0f1c3c0050a399b47840b420e15688a | p@chr2:120409486..120409492, + |
| 6.87e-64 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_a0f1c3c0050a399b47840b420e15688a | p@chr2:120409486..120409492, + |
| 9.62e-40 | FFCP PHASE1:Hg19::chr1:94713418..94713436,+#_7082c37030bf900e0ea3d3bf5f41669b | p1@ENST00000413103 |
| 9.62e-40 | FFCP PHASE2:Hg19::chr1:94713418..94713436,+#_7082c37030bf900e0ea3d3bf5f41669b | p1@ENST00000413103 |
| 1.16e-36 | FFCP PHASE1:Hg19::chr17:79426453..79426462,+#_d79da224893df3329f2ba6405b2539b6 | p@chr17:79426453..79426462, + |
| 1.16e-36 | FFCP PHASE2:Hg19::chr17:79426453..79426462,+#_d79da224893df3329f2ba6405b2539b6 | p@chr17:79426453..79426462, + |
| 1.31e-36 | FFCP PHASE2:Hg19::chr8:77557753..77557755,-#_4c309a48d9b4a37123e9e51b496bb48a | p@chr8:77557753..77557755, - |
| 1.31e-36 | FFCP PHASE1:Hg19::chr8:77557753..77557755,-#_4c309a48d9b4a37123e9e51b496bb48a | p@chr8:77557753..77557755, - |
| 5.58e-32 | FFCP PHASE1:Hg19::chr1:32042764..32042776,+#_2d833767f8b648ebde733b8843c00f77 | p6@TINAGL1 |
| 5.58e-32 | FFCP PHASE2:Hg19::chr1:32042764..32042776,+#_2d833767f8b648ebde733b8843c00f77 | p6@TINAGL1 |
| 1.53e-30 | FFCP PHASE2:Hg19::chr15:91416076..91416089,+#_f38afd07329226b6ca4e96845705f0ac | p9@FURIN |
| 1.53e-30 | FFCP PHASE1:Hg19::chr15:91416076..91416089,+#_f38afd07329226b6ca4e96845705f0ac | p9@FURIN |
| 3.83e-30 | FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_ea922a4a2f612ce9361d4284df936894 | p7@LRRN4 |
| 3.83e-30 | FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_ea922a4a2f612ce9361d4284df936894 | p7@LRRN4 |
| 1.78e-29 | FFCP PHASE1:Hg19::chr1:42777312..42777314,+#_3651a7317d3817757f0a9a95e52cdd90 | p@chr1:42777312..42777314, + |
| 1.78e-29 | FFCP PHASE1:Hg19::chr2:26700984..26700993,-#_3651a7317d3817757f0a9a95e52cdd90 | p7@OTOF |
| 1.78e-29 | FFCP PHASE1:Hg19::chr6:18225523..18225534,-#_3651a7317d3817757f0a9a95e52cdd90 | p@chr6:18225523..18225534, - |
| 1.78e-29 | FFCP PHASE2:Hg19::chr22:47030082..47030087,+#_3651a7317d3817757f0a9a95e52cdd90 | p@chr22:47030082..47030087, + |
| 1.78e-29 | FFCP PHASE1:Hg19::chr2:26700331..26700340,-#_3651a7317d3817757f0a9a95e52cdd90 | p@chr2:26700331..26700340, - |
| 1.78e-29 | FFCP PHASE1:Hg19::chr22:47030082..47030087,+#_3651a7317d3817757f0a9a95e52cdd90 | p@chr22:47030082..47030087, + |
| 1.78e-29 | FFCP PHASE2:Hg19::chr1:42777312..42777314,+#_3651a7317d3817757f0a9a95e52cdd90 | p@chr1:42777312..42777314, + |
| 1.78e-29 | FFCP PHASE2:Hg19::chr2:26700984..26700993,-#_3651a7317d3817757f0a9a95e52cdd90 | p7@OTOF |
| 1.78e-29 | FFCP PHASE2:Hg19::chr6:18225523..18225534,-#_3651a7317d3817757f0a9a95e52cdd90 | p@chr6:18225523..18225534, - |
| 1.78e-29 | FFCP PHASE2:Hg19::chr2:26700331..26700340,-#_3651a7317d3817757f0a9a95e52cdd90 | p@chr2:26700331..26700340, - |
| 7.96e-27 | FFCP PHASE1:Hg19::chr10:3477893..3477912,-#_0a16e0ba238ec1b85e0b2bfd06a02d73 | p@chr10:3477893..3477912, - |
| 7.96e-27 | FFCP PHASE2:Hg19::chr10:3477893..3477912,-#_0a16e0ba238ec1b85e0b2bfd06a02d73 | p@chr10:3477893..3477912, - |
| 6.29e-26 | FFCP PHASE2:Hg19::chr1:172926077..172926120,-#_64ecf4b7e1943a0c0d562282fee238be | p@chr1:172926077..172926120, - |
| 6.29e-26 | FFCP PHASE1:Hg19::chr1:172926077..172926120,-#_64ecf4b7e1943a0c0d562282fee238be | p@chr1:172926077..172926120, - |
| 6.32e-26 | FFCP PHASE1:Hg19::chrX:128782722..128782738,-#_4247d1e64091174458068ddea334c113 | p5@APLN |
| 6.32e-26 | FFCP PHASE2:Hg19::chrX:128782722..128782738,-#_4247d1e64091174458068ddea334c113 | p5@APLN |
| 9.89e-26 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_0b366ea11bd6eff483bf6a658ca44a8b | p@chr2:693380..693398, + |
| 9.89e-26 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_0b366ea11bd6eff483bf6a658ca44a8b | p@chr2:693380..693398, + |
| 1.28e-23 | FFCP PHASE2:Hg19::chr2:133426030..133426041,-#_6cecc71b37e71b81241cc6933dd9b263 | p@chr2:133426030..133426041, - |
| 1.28e-23 | FFCP PHASE1:Hg19::chr6:84849252..84849259,+#_6cecc71b37e71b81241cc6933dd9b263 | p@chr6:84849252..84849259, + |
| 1.28e-23 | FFCP PHASE1:Hg19::chr2:133426030..133426041,-#_6cecc71b37e71b81241cc6933dd9b263 | p@chr2:133426030..133426041, - |
| 1.28e-23 | FFCP PHASE2:Hg19::chr6:84849252..84849259,+#_6cecc71b37e71b81241cc6933dd9b263 | p@chr6:84849252..84849259, + |
| 1.44e-23 | FFCP PHASE1:Hg19::chr1:51791596..51791607,-#_856138d8ab969d70845b54588730d48a | p23@TTC39A |
| 1.44e-23 | FFCP PHASE1:Hg19::chr7:28998254..28998261,-#_856138d8ab969d70845b54588730d48a | p10@TRIL |
| 1.44e-23 | FFCP PHASE2:Hg19::chr1:51791596..51791607,-#_856138d8ab969d70845b54588730d48a | p23@TTC39A |
| 1.44e-23 | FFCP PHASE2:Hg19::chr7:28998254..28998261,-#_856138d8ab969d70845b54588730d48a | p10@TRIL |
| 1.61e-23 | FFCP PHASE1:Hg19::chr7:4051097..4051112,+#_3850f244b0445e03571d1c9f86fae33c | p@chr7:4051097..4051112, + |
| 1.61e-23 | FFCP PHASE1:Hg19::chr15:85403302..85403304,+#_3850f244b0445e03571d1c9f86fae33c | p@chr15:85403302..85403304, + |
| 1.61e-23 | FFCP PHASE2:Hg19::chr7:4051097..4051112,+#_3850f244b0445e03571d1c9f86fae33c | p@chr7:4051097..4051112, + |
| 1.61e-23 | FFCP PHASE2:Hg19::chr15:85403302..85403304,+#_3850f244b0445e03571d1c9f86fae33c | p@chr15:85403302..85403304, + |
| 1.8e-23 | FFCP PHASE1:Hg19::chr16:2141529..2141537,+#_eac3122ba10f47bb7ed91504313ccab6 | p@chr16:2141529..2141537, + |
| 1.8e-23 | FFCP PHASE2:Hg19::chr16:2141529..2141537,+#_eac3122ba10f47bb7ed91504313ccab6 | p@chr16:2141529..2141537, + |
| 2.92e-22 | FFCP PHASE2:Hg19::chr5:74244100..74244117,+#_4b978582ec206b6265acc7636311ec7c | p@chr5:74244100..74244117, + |
| 2.92e-22 | FFCP PHASE1:Hg19::chr5:74244100..74244117,+#_4b978582ec206b6265acc7636311ec7c | p@chr5:74244100..74244117, + |
| 5.69e-22 | FFCP PHASE1:Hg19::chr5:148651758..148651769,-#_9893e2356825fbd3876b3f1fdfa9ea11 | p@chr5:148651758..148651769, - |
| 5.69e-22 | FFCP PHASE2:Hg19::chr5:148651758..148651769,-#_9893e2356825fbd3876b3f1fdfa9ea11 | p@chr5:148651758..148651769, - |
| 2.9e-21 | FFCP PHASE2:Hg19::chr16:86768403..86768437,+#_3971252fb430df3a9fbd632319f9c490 | p@chr16:86768403..86768437, + |
| 2.9e-21 | FFCP PHASE1:Hg19::chr16:86768403..86768437,+#_3971252fb430df3a9fbd632319f9c490 | p@chr16:86768403..86768437, + |
| 4.78e-21 | FFCP PHASE2:Hg19::chr17:2076002..2076026,-#_e11cc4c57c7a97974c80b66508f53fa3 | p@chr17:2076002..2076026, - |
| 4.78e-21 | FFCP PHASE1:Hg19::chr17:2076002..2076026,-#_e11cc4c57c7a97974c80b66508f53fa3 | p@chr17:2076002..2076026, - |
| 1.26e-20 | FFCP PHASE1:Hg19::chr1:32712897..32712909,+#_15967dedd489e02c2a2ec3725bc4df20 | p3@FAM167B |
| 1.26e-20 | FFCP PHASE2:Hg19::chr1:32712897..32712909,+#_15967dedd489e02c2a2ec3725bc4df20 | p3@FAM167B |
| 2.32e-20 | FFCP PHASE2:Hg19::chr11:124628392..124628427,-#_aae0b32fde2ab29e0ff094fc9837acfb | p@chr11:124628392..124628427, - |
| 2.32e-20 | FFCP PHASE1:Hg19::chr11:124628392..124628427,-#_aae0b32fde2ab29e0ff094fc9837acfb | p@chr11:124628392..124628427, - |
| 3.42e-20 | FFCP PHASE2:Hg19::chr3:98591021..98591026,-#_ea9a954c6ccaf946266d7f035fc35710 | p1@ENST00000487339 |
| 3.42e-20 | FFCP PHASE1:Hg19::chr3:98591021..98591026,-#_ea9a954c6ccaf946266d7f035fc35710 | p1@ENST00000487339 |
| 3.44e-20 | FFCP PHASE1:Hg19::chr19:47231340..47231383,-#_89f7399d67061d9aa51ae6eeb39c9604 | p@chr19:47231340..47231383, - |
| 3.44e-20 | FFCP PHASE2:Hg19::chr19:47231340..47231383,-#_89f7399d67061d9aa51ae6eeb39c9604 | p@chr19:47231340..47231383, - |
| 3.58e-20 | FFCP PHASE1:Hg19::chr19:1826957..1826984,-#_1e5cb3b3959ea82f2a75f65a83c50c33 | p@chr19:1826957..1826984, - |
| 3.58e-20 | FFCP PHASE2:Hg19::chr19:1826957..1826984,-#_1e5cb3b3959ea82f2a75f65a83c50c33 | p@chr19:1826957..1826984, - |
| 4.39e-20 | FFCP PHASE1:Hg19::chr4:38057595..38057624,-#_ecfd052af94e2db1137c139a84884c8b | p@chr4:38057595..38057624, - |
| 4.39e-20 | FFCP PHASE2:Hg19::chr4:38057595..38057624,-#_ecfd052af94e2db1137c139a84884c8b | p@chr4:38057595..38057624, - |
| 7.13e-20 | FFCP PHASE1:Hg19::chr2:133426106..133426117,-#_fe24c85be625382166302182226f522c | p@chr2:133426106..133426117, - |
| 7.13e-20 | FFCP PHASE2:Hg19::chr2:133426106..133426117,-#_fe24c85be625382166302182226f522c | p@chr2:133426106..133426117, - |
| 7.84e-20 | FFCP PHASE2:Hg19::chr9:35753821..35753835,-#_82a44803f4c1f270c4e580c5cfa12149 | p@chr9:35753821..35753835, - |
| 7.84e-20 | FFCP PHASE1:Hg19::chr15:36653709..36653720,-#_82a44803f4c1f270c4e580c5cfa12149 | p@chr15:36653709..36653720, - |
| 7.84e-20 | FFCP PHASE2:Hg19::chr15:36653709..36653720,-#_82a44803f4c1f270c4e580c5cfa12149 | p@chr15:36653709..36653720, - |
| 7.84e-20 | FFCP PHASE1:Hg19::chr9:35753821..35753835,-#_82a44803f4c1f270c4e580c5cfa12149 | p@chr9:35753821..35753835, - |
| 8.62e-20 | FFCP PHASE1:Hg19::chr4:145568170..145568180,-#_1b85033d7a29d2ef7491419dda77b73d | p@chr4:145568170..145568180, - |
| 8.62e-20 | FFCP PHASE2:Hg19::chr4:145568170..145568180,-#_1b85033d7a29d2ef7491419dda77b73d | p@chr4:145568170..145568180, - |
| 1.04e-19 | FFCP PHASE2:Hg19::chr19:38397228..38397266,-#_371bd663a2d1c9779c98a7247fa014cb | p1@WDR87 |
| 1.04e-19 | FFCP PHASE1:Hg19::chr19:38397228..38397266,-#_371bd663a2d1c9779c98a7247fa014cb | p1@WDR87 |
| 1.15e-19 | FFCP PHASE1:Hg19::chr14:91270270..91270281,-#_a082e2f332c4ec97cd4b52cc92ff04fb | p@chr14:91270270..91270281, - |
| 1.15e-19 | FFCP PHASE2:Hg19::chr14:91270270..91270281,-#_a082e2f332c4ec97cd4b52cc92ff04fb | p@chr14:91270270..91270281, - |
| 2.44e-19 | FFCP PHASE2:Hg19::chr12:52306196..52306215,+#_0b1c8b9a2ee48eb213836597cc53a0c6 | p6@ACVRL1 |
| 2.44e-19 | FFCP PHASE1:Hg19::chr12:52306196..52306215,+#_0b1c8b9a2ee48eb213836597cc53a0c6 | p6@ACVRL1 |
| 3.27e-19 | FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_4479d85f3a2e2163abb432e36bbfb544 | p@chr3:43538305..43538325, - |
| 3.27e-19 | FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_4479d85f3a2e2163abb432e36bbfb544 | p@chr3:43538305..43538325, - |
| 4.64e-19 | FFCP PHASE1:Hg19::chr17:171147..171161,+#_430976f7659f502a419bc8f44bd2a4ff | p@chr17:171147..171161, + |
| 4.64e-19 | FFCP PHASE2:Hg19::chr17:171147..171161,+#_430976f7659f502a419bc8f44bd2a4ff | p@chr17:171147..171161, + |
| 5.39e-19 | FFCP PHASE1:Hg19::chr1:22211913..22211920,+#_71f8d5e95481297992e311c255feea61 | p@chr1:22211913..22211920, + |
| 5.39e-19 | FFCP PHASE2:Hg19::chr1:22211913..22211920,+#_71f8d5e95481297992e311c255feea61 | p@chr1:22211913..22211920, + |
| 1.99e-18 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_238ca5cfe328887833f2c64674260f52 | p7@HOXA10 |
| 1.99e-18 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_238ca5cfe328887833f2c64674260f52 | p7@HOXA10 |
| 2.69e-18 | FFCP PHASE2:Hg19::chr1:32041957..32041990,+#_84db9eabcdf245ed69461a8e4c9b2e23 | p3@TINAGL1 |
| 2.69e-18 | FFCP PHASE1:Hg19::chr1:32041957..32041990,+#_84db9eabcdf245ed69461a8e4c9b2e23 | p3@TINAGL1 |
| 4.1e-18 | FFCP PHASE2:Hg19::chr6:132270228..132270243,-#_04c3a7d0f67e06edab8a0563e4ecb1e0 | p17@CTGF |
| 4.1e-18 | FFCP PHASE1:Hg19::chr6:132270228..132270243,-#_04c3a7d0f67e06edab8a0563e4ecb1e0 | p17@CTGF |
| 5.7e-18 | FFCP PHASE2:Hg19::chr11:940729..940745,+#_473f1c655ce3c0ab7656c5882b1e08a1 | p5@AP2A2 |
| 5.7e-18 | FFCP PHASE1:Hg19::chr11:940729..940745,+#_473f1c655ce3c0ab7656c5882b1e08a1 | p5@AP2A2 |
| 6.5e-18 | FFCP PHASE2:Hg19::chr19:42007093..42007107,-#_0cc26961e65b2a388e30a31c34985d3b | p@chr19:42007093..42007107, - |
| 6.5e-18 | FFCP PHASE1:Hg19::chr19:42007093..42007107,-#_0cc26961e65b2a388e30a31c34985d3b | p@chr19:42007093..42007107, - |
| 6.99e-18 | FFCP PHASE2:Hg19::chrX:128781853..128781866,-#_a8d531878fea04ef9be9172af997f4db | p@chrX:128781853..128781866, - |
| 6.99e-18 | FFCP PHASE1:Hg19::chrX:128781853..128781866,-#_a8d531878fea04ef9be9172af997f4db | p@chrX:128781853..128781866, - |
| 1.24e-17 | FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_f29e2fb0e1f0f2be0ce783318d576b2b | p@chr16:86604624..86604648, + |
| 1.24e-17 | FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_f29e2fb0e1f0f2be0ce783318d576b2b | p@chr16:86604624..86604648, + |
