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DOID:169: Difference between revisions

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|located_in=
|located_in=
|name=neuroendocrine tumor
|name=neuroendocrine tumor
|namespace=disease_ontology
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=
|part_of=

Latest revision as of 16:49, 12 September 2014

Name:neuroendocrine tumor
Namespace:FANTOM
Xrefs:
links:

ICD9CM:209
ICD9CM:209-209.99
MSH:D018358
NCI:C3809
SNOMEDCT_2010_1_31:128928004
SNOMEDCT_2010_1_31:255046005

UMLS_CUI:C0206754
Synonyms: "neuroendocrine neoplasm" EXACT [SNOMEDCT_2005_07_31:128928004]
"neuroendocrine neoplasm" EXACT [NCI2004_11_17:C3809]
"neuroendocrine tumor (disorder)" EXACT [SNOMEDCT_2005_07_31:255046005]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:171(neuroectodermal tumor)



Children


is a:DOID:4430 (somatostatinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:169 (neuroendocrine tumor), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.83e-98FFCP PHASE2:Hg19::chr1:50569575..50569586,+#_78ef6175a8f2dbe947ab04cf81b16a13p11@ELAVL4
1.83e-98FFCP PHASE1:Hg19::chr4:41884620..41884663,-#_78ef6175a8f2dbe947ab04cf81b16a13p1@ENST00000504870
1.83e-98FFCP PHASE1:Hg19::chr4:41859832..41859854,+#_78ef6175a8f2dbe947ab04cf81b16a13p@chr4:41859832..41859854, +
1.83e-98FFCP PHASE1:Hg19::chr1:50569575..50569586,+#_78ef6175a8f2dbe947ab04cf81b16a13p11@ELAVL4
1.83e-98FFCP PHASE1:Hg19::chr2:16082384..16082391,+#_78ef6175a8f2dbe947ab04cf81b16a13p9@MYCN
1.83e-98FFCP PHASE1:Hg19::chr2:16081024..16081034,+#_78ef6175a8f2dbe947ab04cf81b16a13p10@MYCN
1.83e-98FFCP PHASE2:Hg19::chr11:71952309..71952319,-#_78ef6175a8f2dbe947ab04cf81b16a13p2@PHOX2A
1.83e-98FFCP PHASE2:Hg19::chr4:41884620..41884663,-#_78ef6175a8f2dbe947ab04cf81b16a13p1@ENST00000504870
1.83e-98FFCP PHASE2:Hg19::chr4:41859832..41859854,+#_78ef6175a8f2dbe947ab04cf81b16a13p@chr4:41859832..41859854, +
1.83e-98FFCP PHASE1:Hg19::chr11:71952309..71952319,-#_78ef6175a8f2dbe947ab04cf81b16a13p2@PHOX2A
1.83e-98FFCP PHASE2:Hg19::chr2:16082384..16082391,+#_78ef6175a8f2dbe947ab04cf81b16a13p9@MYCN
1.83e-98FFCP PHASE2:Hg19::chr2:16081024..16081034,+#_78ef6175a8f2dbe947ab04cf81b16a13p10@MYCN
1.1e-87FFCP PHASE1:Hg19::chr4:41750860..41750867,-#_0253e308f1960ffb84ef6c214e8aa4bap8@PHOX2B
1.1e-87FFCP PHASE2:Hg19::chr4:41750860..41750867,-#_0253e308f1960ffb84ef6c214e8aa4bap8@PHOX2B
1.37e-87FFCP PHASE2:Hg19::chr8:142878006..142878015,+#_2d7a25108b9f2c987dc0215cb9d4dabfp@chr8:142878006..142878015, +
1.37e-87FFCP PHASE1:Hg19::chr8:142878006..142878015,+#_2d7a25108b9f2c987dc0215cb9d4dabfp@chr8:142878006..142878015, +
2.58e-74FFCP PHASE2:Hg19::chr5:168271880..168271889,-#_a6ae962c6f95b9fd415a9b576e631888p15@SLIT3
2.58e-74FFCP PHASE2:Hg19::chr4:174440390..174440400,-#_a6ae962c6f95b9fd415a9b576e631888p@chr4:174440390..174440400, -
2.58e-74FFCP PHASE2:Hg19::chr2:16082395..16082415,+#_a6ae962c6f95b9fd415a9b576e631888p6@MYCN
2.58e-74FFCP PHASE1:Hg19::chr2:74735290..74735299,-#_a6ae962c6f95b9fd415a9b576e631888p11@PCGF1
2.58e-74FFCP PHASE2:Hg19::chr2:16082418..16082429,+#_a6ae962c6f95b9fd415a9b576e631888p8@MYCN
2.58e-74FFCP PHASE1:Hg19::chr5:168271880..168271889,-#_a6ae962c6f95b9fd415a9b576e631888p15@SLIT3
2.58e-74FFCP PHASE1:Hg19::chr4:174440390..174440400,-#_a6ae962c6f95b9fd415a9b576e631888p@chr4:174440390..174440400, -
2.58e-74FFCP PHASE1:Hg19::chr2:16082395..16082415,+#_a6ae962c6f95b9fd415a9b576e631888p6@MYCN
2.58e-74FFCP PHASE2:Hg19::chr2:74735290..74735299,-#_a6ae962c6f95b9fd415a9b576e631888p11@PCGF1
2.58e-74FFCP PHASE1:Hg19::chr2:16082418..16082429,+#_a6ae962c6f95b9fd415a9b576e631888p8@MYCN
3.31e-74FFCP PHASE1:Hg19::chr2:74735271..74735288,-#_77abb64ee2b99a17b38a283623f5d86bp10@PCGF1
3.31e-74FFCP PHASE2:Hg19::chr11:71952772..71952788,-#_77abb64ee2b99a17b38a283623f5d86bp@chr11:71952772..71952788, -
3.31e-74FFCP PHASE1:Hg19::chr11:71952772..71952788,-#_77abb64ee2b99a17b38a283623f5d86bp@chr11:71952772..71952788, -
3.31e-74FFCP PHASE2:Hg19::chr2:74735271..74735288,-#_77abb64ee2b99a17b38a283623f5d86bp10@PCGF1
4.26e-74FFCP PHASE2:Hg19::chr4:175257438..175257442,+#_2980704a3e6b242ab13733fb80122cbfp@chr4:175257438..175257442, +
4.26e-74FFCP PHASE1:Hg19::chr4:175257438..175257442,+#_2980704a3e6b242ab13733fb80122cbfp@chr4:175257438..175257442, +
2.62e-66FFCP PHASE2:Hg19::chr4:41750895..41750904,-#_6ca878f5932dc5799a089c4eecde34a7p6@PHOX2B
2.62e-66FFCP PHASE1:Hg19::chr4:41750895..41750904,-#_6ca878f5932dc5799a089c4eecde34a7p6@PHOX2B
2.83e-66FFCP PHASE1:Hg19::chr13:37494987..37494992,-#_6a30c607f5571e02d2e9c760c5552ca9p23@SMAD9
2.83e-66FFCP PHASE1:Hg19::chr5:168310338..168310348,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr5:168310338..168310348, -
2.83e-66FFCP PHASE2:Hg19::chr4:174930493..174930503,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174930493..174930503, -
2.83e-66FFCP PHASE1:Hg19::chr11:71952706..71952712,-#_6a30c607f5571e02d2e9c760c5552ca9p4@PHOX2A
2.83e-66FFCP PHASE2:Hg19::chr7:19186529..19186536,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr7:19186529..19186536, +
2.83e-66FFCP PHASE1:Hg19::chr7:19184929..19184938,-#_6a30c607f5571e02d2e9c760c5552ca9p4@FERD3L
2.83e-66FFCP PHASE1:Hg19::chr7:8276855..8276873,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr7:8276855..8276873, +
2.83e-66FFCP PHASE1:Hg19::chr1:22696471..22696505,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr1:22696471..22696505, -
2.83e-66FFCP PHASE1:Hg19::chr4:175041125..175041137,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:175041125..175041137, -
2.83e-66FFCP PHASE1:Hg19::chr2:29747945..29747955,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:29747945..29747955, -
2.83e-66FFCP PHASE2:Hg19::chr4:174968748..174968753,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174968748..174968753, +
2.83e-66FFCP PHASE1:Hg19::chr7:19185585..19185590,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr7:19185585..19185590, -
2.83e-66FFCP PHASE1:Hg19::chr2:30142997..30143009,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:30142997..30143009, -
2.83e-66FFCP PHASE2:Hg19::chr7:19185493..19185503,-#_6a30c607f5571e02d2e9c760c5552ca9p2@FERD3L
2.83e-66FFCP PHASE2:Hg19::chr5:16180927..16180934,-#_6a30c607f5571e02d2e9c760c5552ca9p7@MARCH11
2.83e-66FFCP PHASE1:Hg19::chr13:36045103..36045110,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr13:36045103..36045110, +
2.83e-66FFCP PHASE2:Hg19::chr4:41875797..41875802,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:41875797..41875802, -
2.83e-66FFCP PHASE1:Hg19::chr7:8302002..8302015,-#_6a30c607f5571e02d2e9c760c5552ca9p10@ICA1
2.83e-66FFCP PHASE1:Hg19::chr17:11389592..11389599,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr17:11389592..11389599, -
2.83e-66FFCP PHASE1:Hg19::chr4:174954376..174954399,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174954376..174954399, -
2.83e-66FFCP PHASE2:Hg19::chr4:174930547..174930558,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174930547..174930558, -
2.83e-66FFCP PHASE1:Hg19::chr2:16082933..16082942,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:16082933..16082942, +
2.83e-66FFCP PHASE1:Hg19::chr7:19185044..19185056,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr7:19185044..19185056, +
2.83e-66FFCP PHASE1:Hg19::chr2:29894082..29894092,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:29894082..29894092, -
2.83e-66FFCP PHASE1:Hg19::chr4:175041762..175041777,-#_6a30c607f5571e02d2e9c760c5552ca9p2@ENST00000503140
2.83e-66FFCP PHASE2:Hg19::chr7:8276508..8276551,-#_6a30c607f5571e02d2e9c760c5552ca9p14@ICA1
2.83e-66FFCP PHASE1:Hg19::chr4:174930472..174930480,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174930472..174930480, -
2.83e-66FFCP PHASE2:Hg19::chr7:19185559..19185569,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr7:19185559..19185569, -
2.83e-66FFCP PHASE1:Hg19::chr17:74540293..74540300,+#_6a30c607f5571e02d2e9c760c5552ca9p15@PRCD
2.83e-66FFCP PHASE2:Hg19::chr11:71955016..71955024,-#_6a30c607f5571e02d2e9c760c5552ca9p7@PHOX2A
2.83e-66FFCP PHASE1:Hg19::chr7:19185475..19185487,-#_6a30c607f5571e02d2e9c760c5552ca9p1@FERD3L
2.83e-66FFCP PHASE1:Hg19::chr4:113870230..113870237,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:113870230..113870237, +
2.83e-66FFCP PHASE1:Hg19::chr18:77044132..77044175,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr18:77044132..77044175, +
2.83e-66FFCP PHASE2:Hg19::chr5:168310338..168310348,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr5:168310338..168310348, -
2.83e-66FFCP PHASE2:Hg19::chr7:19184929..19184938,-#_6a30c607f5571e02d2e9c760c5552ca9p4@FERD3L
2.83e-66FFCP PHASE2:Hg19::chr2:29728669..29728672,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:29728669..29728672, -
2.83e-66FFCP PHASE1:Hg19::chr7:19186529..19186536,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr7:19186529..19186536, +
2.83e-66FFCP PHASE2:Hg19::chr7:8276855..8276873,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr7:8276855..8276873, +
2.83e-66FFCP PHASE2:Hg19::chr1:22696471..22696505,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr1:22696471..22696505, -
2.83e-66FFCP PHASE2:Hg19::chr17:11389592..11389599,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr17:11389592..11389599, -
2.83e-66FFCP PHASE2:Hg19::chr4:175041125..175041137,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:175041125..175041137, -
2.83e-66FFCP PHASE1:Hg19::chr4:174930493..174930503,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174930493..174930503, -
2.83e-66FFCP PHASE2:Hg19::chr7:19185585..19185590,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr7:19185585..19185590, -
2.83e-66FFCP PHASE2:Hg19::chr2:29747945..29747955,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:29747945..29747955, -
2.83e-66FFCP PHASE2:Hg19::chr2:30142997..30143009,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:30142997..30143009, -
2.83e-66FFCP PHASE2:Hg19::chr12:85380546..85380557,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr12:85380546..85380557, +
2.83e-66FFCP PHASE2:Hg19::chr7:8302002..8302015,-#_6a30c607f5571e02d2e9c760c5552ca9p10@ICA1
2.83e-66FFCP PHASE1:Hg19::chr4:174968748..174968753,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174968748..174968753, +
2.83e-66FFCP PHASE1:Hg19::chr18:56886837..56886844,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr18:56886837..56886844, +
2.83e-66FFCP PHASE2:Hg19::chr4:174954376..174954399,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174954376..174954399, -
2.83e-66FFCP PHASE1:Hg19::chr11:71955016..71955024,-#_6a30c607f5571e02d2e9c760c5552ca9p7@PHOX2A
2.83e-66FFCP PHASE1:Hg19::chr7:19185493..19185503,-#_6a30c607f5571e02d2e9c760c5552ca9p2@FERD3L
2.83e-66FFCP PHASE1:Hg19::chr5:16180927..16180934,-#_6a30c607f5571e02d2e9c760c5552ca9p7@MARCH11
2.83e-66FFCP PHASE1:Hg19::chr4:41875797..41875802,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:41875797..41875802, -
2.83e-66FFCP PHASE2:Hg19::chr2:16082933..16082942,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:16082933..16082942, +
2.83e-66FFCP PHASE2:Hg19::chr7:19185044..19185056,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr7:19185044..19185056, +
2.83e-66FFCP PHASE2:Hg19::chr17:74540293..74540300,+#_6a30c607f5571e02d2e9c760c5552ca9p15@PRCD
2.83e-66FFCP PHASE2:Hg19::chr13:37494987..37494992,-#_6a30c607f5571e02d2e9c760c5552ca9p23@SMAD9
2.83e-66FFCP PHASE2:Hg19::chr11:71952706..71952712,-#_6a30c607f5571e02d2e9c760c5552ca9p4@PHOX2A
2.83e-66FFCP PHASE2:Hg19::chr4:175041762..175041777,-#_6a30c607f5571e02d2e9c760c5552ca9p2@ENST00000503140
2.83e-66FFCP PHASE1:Hg19::chr4:174930547..174930558,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174930547..174930558, -
2.83e-66FFCP PHASE2:Hg19::chr2:29894082..29894092,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:29894082..29894092, -
2.83e-66FFCP PHASE2:Hg19::chr4:174930472..174930480,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174930472..174930480, -
2.83e-66FFCP PHASE2:Hg19::chr18:77044132..77044175,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr18:77044132..77044175, +
2.83e-66FFCP PHASE1:Hg19::chr7:8276508..8276551,-#_6a30c607f5571e02d2e9c760c5552ca9p14@ICA1
2.83e-66FFCP PHASE1:Hg19::chr12:85380546..85380557,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr12:85380546..85380557, +

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