UBERON:0000916: Difference between revisions
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|located_in= | |located_in= | ||
|name=abdomen | |name=abdomen | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002417 | |part_of=UBERON:0002417 | ||
Latest revision as of 17:10, 12 September 2014
| Name: | abdomen | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "In vertebrates such as mammals the abdomen (belly) constitutes the part of the body between the thorax (chest) and pelvis. The region enclosed by the abdomen is termed the abdominal cavity." [Wikipedia:Abdomen] | ||
| Xrefs: |
| ||
| Synonyms: |
"abdominopelvic region" EXACT [FMA:9577] "abdominopelvis" EXACT [FMA:9577] "adult abdomen" RELATED [] "belly" RELATED [] | ||
| Comments: | Taxon notes: Vertebrate specific. In arthropods 'abdomen' is the most distal section of the body which lies behind the thorax or cephalothorax. If need be we can introduce some grouping class | ||
| Alt_id: | UBERON:FBbt_00000020-FMA_9577-MA_0000029-MIAA_0000298 | ||
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0009569(subdivision of trunk) |
|---|---|
| part_of: | UBERON:0002417(abdominal segment of trunk) |
Children
| part of: | UBERON:0002106 (spleen),UBERON:0002107 (liver),UBERON:0002110 (gallbladder),UBERON:0002113 (kidney),UBERON:0002369 (adrenal gland),UBERON:0003497 (abdomen blood vessel),UBERON:0003567 (abdomen connective tissue),UBERON:0003684 (abdominal cavity),UBERON:0003697 (abdominal wall),UBERON:0005172 (abdomen element),UBERON:0006858 (adrenal/interrenal gland),UBERON:0017672 (abdominal viscera) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10017-101C8 (kidney, adult, pool1)
- 10018-101C9 (liver, adult, pool1)
- 10025-101D7 (spleen, adult, pool1)
- 10044-101F8 (spleen, fetal, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10081-102A9 (adrenal gland, adult, pool1)
- 10086-102B5 (liver, fetal, pool1)
- 10088-102B7
- 10089-102B8
- 10095-102C5
... further results Mouse (Mus musculus)
- 10017-101C8 (kidney, adult, pool1)
- 10018-101C9 (liver, adult, pool1)
- 10025-101D7 (spleen, adult, pool1)
- 10044-101F8 (spleen, fetal, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10081-102A9 (adrenal gland, adult, pool1)
- 10086-102B5 (liver, fetal, pool1)
- 10088-102B7
- 10089-102B8
- 10095-102C5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000916 (abdomen), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.88e-45 | FFCP PHASE2:Hg19::chr10:99344428..99344441,+#_1cb8f4e9434a59c6db36fc2c183765e8 | p5@PI4K2A |
| 3.88e-45 | FFCP PHASE1:Hg19::chr10:99344428..99344441,+#_1cb8f4e9434a59c6db36fc2c183765e8 | p5@PI4K2A |
| 7.55e-41 | FFCP PHASE1:Hg19::chr16:57831685..57831697,-#_b904d1ff37823ac95618f28aba548a9f | p7@KIFC3 |
| 7.55e-41 | FFCP PHASE2:Hg19::chr16:57831685..57831697,-#_b904d1ff37823ac95618f28aba548a9f | p7@KIFC3 |
| 7.31e-40 | FFCP PHASE1:Mm9::chr4:95246108..95246119,+#_3bdda883a27db553c59ab746fd72b265 | p4@Fggy |
| 7.31e-40 | FFCP PHASE2:Mm9::chr4:95246108..95246119,+#_3bdda883a27db553c59ab746fd72b265 | p4@Fggy |
| 3.21e-39 | FFCP PHASE2:Mm9::chr12:58298278..58298292,-#_e10a6d38ffbfdac02c96890fdcf53959 | p4@Slc25a21 |
| 3.21e-39 | FFCP PHASE1:Mm9::chr12:58298278..58298292,-#_e10a6d38ffbfdac02c96890fdcf53959 | p4@Slc25a21 |
| 1.15e-38 | FFCP PHASE1:Mm9::chr12:58298298..58298317,-#_bb637eac217e7212f9b3919e4aecaf23 | p3@Slc25a21 |
| 1.15e-38 | FFCP PHASE2:Mm9::chr12:58298298..58298317,-#_bb637eac217e7212f9b3919e4aecaf23 | p3@Slc25a21 |
| 2.74e-38 | FFCP PHASE1:Hg19::chr1:55331310..55331365,-#_32e1ebf5d92a37f18b178a2657b7bf19 | p3@DHCR24 |
| 2.74e-38 | FFCP PHASE2:Hg19::chr1:55331310..55331365,-#_32e1ebf5d92a37f18b178a2657b7bf19 | p3@DHCR24 |
| 4.6e-38 | FFCP PHASE1:Mm9::chr12:58298249..58298262,-#_1b63d0cc675c7628075089bf4773b864 | p5@Slc25a21 |
| 4.6e-38 | FFCP PHASE2:Mm9::chr12:58298249..58298262,-#_1b63d0cc675c7628075089bf4773b864 | p5@Slc25a21 |
| 4.65e-37 | FFCP PHASE1:Mm9::chr4:129255765..129255776,-#_0cc10ab34dcb9bbd31173d5b5e74808d | p2@Fam167b |
| 4.65e-37 | FFCP PHASE2:Mm9::chr4:129255765..129255776,-#_0cc10ab34dcb9bbd31173d5b5e74808d | p2@Fam167b |
| 6.07e-37 | FFCP PHASE2:Hg19::chr8:21911054..21911086,+#_63ec928f03b7a2150f5e8f2c929c34b1 | p9@EPB49 |
| 6.07e-37 | FFCP PHASE1:Hg19::chr8:21911054..21911086,+#_63ec928f03b7a2150f5e8f2c929c34b1 | p9@EPB49 |
| 1.34e-36 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_cd49c2b23d494187fcf1eda0117bff76 | p4@PAX2 |
| 1.34e-36 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_cd49c2b23d494187fcf1eda0117bff76 | p4@PAX2 |
| 3.37e-36 | FFCP PHASE2:Hg19::chr11:117695449..117695466,-#_d1dc992cd78ffd87ed5fbc62add0b55d | p1@FXYD2 |
| 3.37e-36 | FFCP PHASE1:Hg19::chr11:117695449..117695466,-#_d1dc992cd78ffd87ed5fbc62add0b55d | p1@FXYD2 |
| 8.22e-36 | FFCP PHASE1:Mm9::chr6:34129226..34129246,+#_b898533218c43b1c9f1b5e5ae3b7e4a7 | p2@ENSMUST00000145644 |
| 8.22e-36 | FFCP PHASE2:Mm9::chr6:34129226..34129246,+#_b898533218c43b1c9f1b5e5ae3b7e4a7 | p2@ENSMUST00000145644 |
| 1.41e-35 | FFCP PHASE2:Mm9::chr10:58904532..58904548,-#_72be87006a1b96ac15a20a0ba7251f08 | p3@Oit3 |
| 1.41e-35 | FFCP PHASE1:Mm9::chr10:58904532..58904548,-#_72be87006a1b96ac15a20a0ba7251f08 | p3@Oit3 |
| 1.53e-35 | FFCP PHASE1:Mm9::chr8:73247943..73247958,+#_df27df0f7a13745300f64cca2da3eb28 | p3@Pde4c |
| 1.53e-35 | FFCP PHASE2:Mm9::chr8:73247943..73247958,+#_df27df0f7a13745300f64cca2da3eb28 | p3@Pde4c |
| 3.31e-35 | FFCP PHASE1:Mm9::chr9:44611035..44611044,-#_1fd30204dcd251a200502816d7f2b8a5 | p4@Ttc36 |
| 3.31e-35 | FFCP PHASE2:Mm9::chr9:44611035..44611044,-#_1fd30204dcd251a200502816d7f2b8a5 | p4@Ttc36 |
| 1.64e-34 | FFCP PHASE2:Mm9::chr19:12707997..12708015,+#_89ce3a672b79956a06bf520ff4014f65 | p1@Glyat |
| 1.64e-34 | FFCP PHASE1:Mm9::chr19:12707997..12708015,+#_89ce3a672b79956a06bf520ff4014f65 | p1@Glyat |
| 2.61e-34 | FFCP PHASE2:Mm9::chr11:60622345..60622377,-#_beff25483594889765e9b220b6237560 | p@chr11:60622345..60622377, - |
| 2.61e-34 | FFCP PHASE1:Mm9::chr11:60622345..60622377,-#_beff25483594889765e9b220b6237560 | p@chr11:60622345..60622377, - |
| 8.0e-34 | FFCP PHASE1:Mm9::chr11:7097807..7097814,+#_305eaeaa39cbb3759c81dd7c0ae7fb86 | p2@Igfbp1 |
| 8.0e-34 | FFCP PHASE2:Mm9::chr11:7097807..7097814,+#_305eaeaa39cbb3759c81dd7c0ae7fb86 | p2@Igfbp1 |
| 1.27e-33 | FFCP PHASE2:Mm9::chr13:23931270..23931311,+#_37bbe71c43c11fa8cc2e4cda95fce8dd | p2@Slc17a3 |
| 1.27e-33 | FFCP PHASE1:Mm9::chr13:23931270..23931311,+#_37bbe71c43c11fa8cc2e4cda95fce8dd | p2@Slc17a3 |
| 1.4e-33 | FFCP PHASE2:Mm9::chr4:95246137..95246153,+#_1e83832cd86a5e9081d46601b819e4c9 | p3@Fggy |
| 1.4e-33 | FFCP PHASE1:Mm9::chr4:95246137..95246153,+#_1e83832cd86a5e9081d46601b819e4c9 | p3@Fggy |
| 1.76e-33 | FFCP PHASE1:Mm9::chr16:37621995..37622022,-#_ea216204680d0ae4dd15c6b43716a49f | p@chr16:37621995..37622022, - |
| 1.76e-33 | FFCP PHASE2:Mm9::chr16:37621995..37622022,-#_ea216204680d0ae4dd15c6b43716a49f | p@chr16:37621995..37622022, - |
| 2.2e-33 | FFCP PHASE1:Mm9::chr4:96330769..96330789,-#_2857e8268b82c47ea33e80ca20fd4147 | p2@Cyp2j5 |
| 2.2e-33 | FFCP PHASE2:Mm9::chr4:96330769..96330789,-#_2857e8268b82c47ea33e80ca20fd4147 | p2@Cyp2j5 |
| 2.92e-33 | FFCP PHASE2:Mm9::chr13:23931467..23931489,+#_693dcf542d8b6b1b656a094b9dcf5d15 | p3@Slc17a3 |
| 2.92e-33 | FFCP PHASE1:Mm9::chr13:23931467..23931489,+#_693dcf542d8b6b1b656a094b9dcf5d15 | p3@Slc17a3 |
| 5.26e-33 | FFCP PHASE1:Mm9::chr16:37580223..37580237,+#_feb11aeefc0212b51ac64cf4f05a4ea8 | p4@Hgd |
| 5.26e-33 | FFCP PHASE2:Mm9::chr16:37580223..37580237,+#_feb11aeefc0212b51ac64cf4f05a4ea8 | p4@Hgd |
| 8.68e-33 | FFCP PHASE1:Mm9::chr1:141398256..141398267,+#_6f1d10692e464ffe3dfe86e683e62aad | p3@F13b |
| 8.68e-33 | FFCP PHASE2:Mm9::chr1:141398256..141398267,+#_6f1d10692e464ffe3dfe86e683e62aad | p3@F13b |
| 1.21e-32 | FFCP PHASE1:Mm9::chr15:82624876..82624892,-#_4d0e266f441dfda43f726c3b2866d03f | p5@Cyp2d26 |
| 1.21e-32 | FFCP PHASE2:Mm9::chr15:82624876..82624892,-#_4d0e266f441dfda43f726c3b2866d03f | p5@Cyp2d26 |
| 1.25e-32 | FFCP PHASE1:Mm9::chr10:95305558..95305580,-#_5f051457e847cb26bd7a7d45f9a39822 | p@chr10:95305558..95305580, - |
| 1.25e-32 | FFCP PHASE2:Mm9::chr10:95305558..95305580,-#_5f051457e847cb26bd7a7d45f9a39822 | p@chr10:95305558..95305580, - |
| 1.31e-32 | FFCP PHASE1:Hg19::chr20:42187656..42187673,+#_ec595369afb9bb2178b03d0f243fa9c2 | p2@SGK2 |
| 1.31e-32 | FFCP PHASE2:Hg19::chr20:42187656..42187673,+#_ec595369afb9bb2178b03d0f243fa9c2 | p2@SGK2 |
| 1.68e-32 | FFCP PHASE2:Mm9::chr9:44609886..44609901,-#_1254b212dffb673cbf62b7483b6d5bbc | p@chr9:44609886..44609901, - |
| 1.68e-32 | FFCP PHASE1:Mm9::chr9:44609886..44609901,-#_1254b212dffb673cbf62b7483b6d5bbc | p@chr9:44609886..44609901, - |
| 1.75e-32 | FFCP PHASE1:Mm9::chr16:37580298..37580310,+#_b56cd0fc165b68eea05834bd626991a4 | p3@Hgd |
| 1.75e-32 | FFCP PHASE2:Mm9::chr16:37580298..37580310,+#_b56cd0fc165b68eea05834bd626991a4 | p3@Hgd |
| 2.68e-32 | FFCP PHASE2:Mm9::chr15:9265320..9265378,+#_42ed3c9393a3bf27dc0f9080f02872c9 | p1@Ugt3a2 |
| 2.68e-32 | FFCP PHASE1:Mm9::chr15:9265320..9265378,+#_42ed3c9393a3bf27dc0f9080f02872c9 | p1@Ugt3a2 |
| 3.54e-32 | FFCP PHASE1:Mm9::chr4:150283537..150283568,-#_73cafc4438454d47fc81aed624604864 | p5@Park7 |
| 3.54e-32 | FFCP PHASE2:Mm9::chr4:150283537..150283568,-#_73cafc4438454d47fc81aed624604864 | p5@Park7 |
| 3.97e-32 | FFCP PHASE2:Mm9::chr9:44609861..44609874,-#_af68a91e77a3bf92268b87a96371e979 | p@chr9:44609861..44609874, - |
| 3.97e-32 | FFCP PHASE1:Mm9::chr9:44609861..44609874,-#_af68a91e77a3bf92268b87a96371e979 | p@chr9:44609861..44609874, - |
| 4.0e-32 | FFCP PHASE1:Hg19::chr7:44580918..44580934,-#_bfc760c0ba82da154e6cb41a84218eb4 | p2@NPC1L1 |
| 4.0e-32 | FFCP PHASE2:Hg19::chr7:44580918..44580934,-#_bfc760c0ba82da154e6cb41a84218eb4 | p2@NPC1L1 |
| 5.65e-32 | FFCP PHASE1:Mm9::chr7:30124235..30124271,-#_9b5bbe5899c0d04147258d27203d4efd | p@chr7:30124235..30124271, - |
| 5.65e-32 | FFCP PHASE2:Mm9::chr7:30124235..30124271,-#_9b5bbe5899c0d04147258d27203d4efd | p@chr7:30124235..30124271, - |
| 5.84e-32 | FFCP PHASE2:Mm9::chr15:99733367..99733388,+#_fbc1375150530ec61e34fa766ce898a9 | p@chr15:99733367..99733388, + |
| 5.84e-32 | FFCP PHASE1:Mm9::chr15:99733367..99733388,+#_fbc1375150530ec61e34fa766ce898a9 | p@chr15:99733367..99733388, + |
| 6.15e-32 | FFCP PHASE1:Mm9::chr13:58224772..58224789,-#_0b7f277f3a29328f9188d3c9d056c303 | p@chr13:58224772..58224789, - |
| 6.15e-32 | FFCP PHASE2:Mm9::chr13:58224772..58224789,-#_0b7f277f3a29328f9188d3c9d056c303 | p@chr13:58224772..58224789, - |
| 6.95e-32 | FFCP PHASE2:Hg19::chr7:44580861..44580912,-#_517a0e550923c5ea83e42a6d8e2765e4 | p1@NPC1L1 |
| 6.95e-32 | FFCP PHASE1:Hg19::chr7:44580861..44580912,-#_517a0e550923c5ea83e42a6d8e2765e4 | p1@NPC1L1 |
| 7.08e-32 | FFCP PHASE2:Mm9::chr4:140176541..140176565,-#_ee6da282b242b348ebfc825db4427996 | p@chr4:140176541..140176565, - |
| 7.08e-32 | FFCP PHASE1:Mm9::chr4:140176541..140176565,-#_ee6da282b242b348ebfc825db4427996 | p@chr4:140176541..140176565, - |
| 7.56e-32 | FFCP PHASE1:Mm9::chr6:3938967..3938987,-#_8c3bd24f8a8155ae1b3ef001639ae754 | p@chr6:3938967..3938987, - |
| 7.56e-32 | FFCP PHASE2:Mm9::chr6:3938967..3938987,-#_8c3bd24f8a8155ae1b3ef001639ae754 | p@chr6:3938967..3938987, - |
| 1.06e-31 | FFCP PHASE1:Mm9::chr16:23029135..23029149,-#_6e3b588716c2938539ee674c90570108 | p4@Kng2 |
| 1.06e-31 | FFCP PHASE2:Mm9::chr16:23029135..23029149,-#_6e3b588716c2938539ee674c90570108 | p4@Kng2 |
| 1.19e-31 | FFCP PHASE1:Mm9::chrX:72625134..72625162,-#_be50bb800c5d63e95997c0900dbc1110 | p1@F8 |
| 1.19e-31 | FFCP PHASE2:Mm9::chrX:72625134..72625162,-#_be50bb800c5d63e95997c0900dbc1110 | p1@F8 |
| 1.91e-31 | FFCP PHASE1:Mm9::chr11:102268097..102268142,-#_0830b752a49e3209fcacfc5a67349984 | p4@Slc25a39 |
| 1.91e-31 | FFCP PHASE2:Mm9::chr11:102268097..102268142,-#_0830b752a49e3209fcacfc5a67349984 | p4@Slc25a39 |
| 2.3e-31 | FFCP PHASE1:Mm9::chr1:177562272..177562282,+#_61816453c9bf07a801ac63d89cb25ff5 | p4@Kmo |
| 2.3e-31 | FFCP PHASE2:Mm9::chr1:177562272..177562282,+#_61816453c9bf07a801ac63d89cb25ff5 | p4@Kmo |
| 2.9e-31 | FFCP PHASE2:Hg19::chr4:155484103..155484147,+#_9bc89ecbb95d343a327129594c299fa8 | p2@FGB |
| 2.9e-31 | FFCP PHASE1:Hg19::chr4:155484103..155484147,+#_9bc89ecbb95d343a327129594c299fa8 | p2@FGB |
| 3.29e-31 | FFCP PHASE2:Mm9::chr2:27103824..27103840,-#_dd752fb324520385aee577baa3058ba4 | p6@Sardh |
| 3.29e-31 | FFCP PHASE1:Mm9::chr2:27103824..27103840,-#_dd752fb324520385aee577baa3058ba4 | p6@Sardh |
| 4.81e-31 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_31a9f34be9b81fc44fe5b00cd01b7557 | p7@HOXA10 |
| 4.81e-31 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_31a9f34be9b81fc44fe5b00cd01b7557 | p7@HOXA10 |
| 8.15e-31 | FFCP PHASE1:Mm9::chr8:25686769..25686840,-#_2e139b488ea673f43dd9fac77b937438 | p1@Ido2 |
| 8.15e-31 | FFCP PHASE2:Mm9::chr8:25686769..25686840,-#_2e139b488ea673f43dd9fac77b937438 | p1@Ido2 |
| 9.04e-31 | FFCP PHASE2:Mm9::chr13:94444278..94444281,-#_4ffb10f8ff6a90c87cffad23391c2b5b | p3@Bhmt2 |
| 9.04e-31 | FFCP PHASE1:Mm9::chr13:94444278..94444281,-#_4ffb10f8ff6a90c87cffad23391c2b5b | p3@Bhmt2 |
| 9.75e-31 | FFCP PHASE1:Mm9::chr5:90897694..90897705,+#_802f0595dda6b0fb41fa28df21a90ec4 | p@chr5:90897694..90897705, + |
| 9.75e-31 | FFCP PHASE2:Mm9::chr5:90897694..90897705,+#_802f0595dda6b0fb41fa28df21a90ec4 | p@chr5:90897694..90897705, + |
