UBERON:0001533: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|located_in= | |located_in= | ||
|name=subclavian artery | |name=subclavian artery | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000915 | |part_of=UBERON:0000915 | ||
Latest revision as of 17:18, 12 September 2014
| Name: | subclavian artery | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "In human anatomy, the subclavian artery is a major artery of the upper thorax that mainly supplies blood to the head and arms. It is located below the clavicle, hence the name. There is a left subclavian and a right subclavian. On the left side of the body, the subclavian comes directly off the arch of aorta. On the right side of the body, the subclavian arises from the relatively short brachiocephalic artery (trunk) when it bifurcates into the subclavian and the right common carotid artery. The usual branches of the subclavian on both sides of the body are the vertebral artery, the internal thoracic artery, the thyrocervical trunk, the costocervical trunk and the dorsal scapular artery. The subclavian becomes the axillary artery at the lateral border of the first rib[WP]. The pectoral (subclavian) arteries originate from the dorsal aorta and takes the blood outward into the fin from the paired portion of the dorsal aorta posterior to the last aortic arch. <a href | ||
| Xrefs: |
| ||
| Synonyms: |
"arteria subclavia" EXACT [XAO:0000365] "arteria subclavia" RELATED LATIN [Wikipedia:Subclavian_artery] "arterial tree of upper limb" EXACT [] "PA" RELATED [] "pectoral artery" EXACT [] "subclavian arterial tree" EXACT [] | ||
| Comments: | Editors notes: this should be reviewed for pan-vertebrate applicability. Developmental relationships should be added (intersegmental artery and right dorsal aorta in EHDAA2, occipitovertebral artery in XAO) | ||
| Alt_id: | UBERON:FMA_3951-MA_0002045-ZFA_0005086 | ||
| Subset: |
uberon_slim vertebrate_core |
200px-Gray506.svg.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004573(systemic artery) |
|---|---|
| develops_from: | UBERON:0002457(intersomitic artery),UBERON:0005622(right dorsal aorta) |
| part_of: | UBERON:0000915(thoracic segment of trunk) |
Children
| part of: | UBERON:0002456 (internal thoracic artery),CL:0002595 (smooth muscle cell of the subclavian artery) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
- 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
- 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
- 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
- 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
- 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001533 (subclavian artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.65e-59 | FFCP PHASE2:Hg19::chr19:18319115..18319122,+#_0d78589e5de885b0cd6325012499dc83 | p@chr19:18319115..18319122, + |
| 1.65e-59 | FFCP PHASE1:Hg19::chr19:18319115..18319122,+#_0d78589e5de885b0cd6325012499dc83 | p@chr19:18319115..18319122, + |
| 3.22e-57 | FFCP PHASE1:Hg19::chr9:3898831..3898843,-#_567cb1529a8eec901a48a349165f2835 | p@chr9:3898831..3898843, - |
| 3.22e-57 | FFCP PHASE2:Hg19::chr9:3898831..3898843,-#_567cb1529a8eec901a48a349165f2835 | p@chr9:3898831..3898843, - |
| 1.94e-51 | FFCP PHASE1:Hg19::chr13:67922393..67922399,-#_b4483b7772207d580d97c8f17565c312 | p@chr13:67922393..67922399, - |
| 1.94e-51 | FFCP PHASE2:Hg19::chr13:67922393..67922399,-#_b4483b7772207d580d97c8f17565c312 | p@chr13:67922393..67922399, - |
| 2.3e-51 | FFCP PHASE2:Hg19::chr8:4812273..4812274,-#_0cc6de924cdb32901f38a9816ca68176 | p@chr8:4812273..4812274, - |
| 2.3e-51 | FFCP PHASE1:Hg19::chr8:4812273..4812274,-#_0cc6de924cdb32901f38a9816ca68176 | p@chr8:4812273..4812274, - |
| 1.42e-40 | FFCP PHASE2:Hg19::chr11:102668160..102668174,+#_4b5e48ee86dba74cb6a4db452df12dcc | p@chr11:102668160..102668174, + |
| 1.42e-40 | FFCP PHASE1:Hg19::chr11:102668160..102668174,+#_4b5e48ee86dba74cb6a4db452df12dcc | p@chr11:102668160..102668174, + |
| 1.48e-40 | FFCP PHASE2:Hg19::chr21:29911657..29911665,+#_529d915a66f96d486a08e55e62cdfc92 | p2@LINC00161 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr21:29911657..29911665,+#_529d915a66f96d486a08e55e62cdfc92 | p2@LINC00161 |
| 3.31e-40 | FFCP PHASE2:Hg19::chr9:3899086..3899097,-#_878599ed65a0c5228c3176ada7a7412c | p@chr9:3899086..3899097, - |
| 3.31e-40 | FFCP PHASE2:Hg19::chr6:50692227..50692236,+#_878599ed65a0c5228c3176ada7a7412c | p@chr6:50692227..50692236, + |
| 3.31e-40 | FFCP PHASE1:Hg19::chr6:50692227..50692236,+#_878599ed65a0c5228c3176ada7a7412c | p@chr6:50692227..50692236, + |
| 3.31e-40 | FFCP PHASE1:Hg19::chr9:3899086..3899097,-#_878599ed65a0c5228c3176ada7a7412c | p@chr9:3899086..3899097, - |
| 4.35e-40 | FFCP PHASE2:Hg19::chrY:16915943..16915949,-#_75236aefb57a11c88e89c25eda9de309 | p1@NLGN4Y-AS1 |
| 4.35e-40 | FFCP PHASE1:Hg19::chrY:16915943..16915949,-#_75236aefb57a11c88e89c25eda9de309 | p1@NLGN4Y-AS1 |
| 2.29e-38 | FFCP PHASE2:Hg19::chr7:93516564..93516575,+#_b2a62eabb3ef5c8eb7ede24f925f74e5 | p@chr7:93516564..93516575, + |
| 2.29e-38 | FFCP PHASE1:Hg19::chr7:93516564..93516575,+#_b2a62eabb3ef5c8eb7ede24f925f74e5 | p@chr7:93516564..93516575, + |
| 2.0e-36 | FFCP PHASE1:Hg19::chr19:55877364..55877367,-#_f890ab0c862cba7c4ed254cb029cd7c2 | p@chr19:55877364..55877367, - |
| 2.0e-36 | FFCP PHASE2:Hg19::chr19:55877364..55877367,-#_f890ab0c862cba7c4ed254cb029cd7c2 | p@chr19:55877364..55877367, - |
| 2.07e-36 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_8a9ac456044fbe33592a3d957e5dc74d | p@chr6:53359400..53359406, + |
| 2.07e-36 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_8a9ac456044fbe33592a3d957e5dc74d | p@chr6:53359400..53359406, + |
| 2.55e-36 | FFCP PHASE2:Hg19::chr7:93519591..93519595,-#_7294b44b1acf743783e9ffe6bf07c060 | p9@TFPI2 |
| 2.55e-36 | FFCP PHASE1:Hg19::chr7:93519591..93519595,-#_7294b44b1acf743783e9ffe6bf07c060 | p9@TFPI2 |
| 7.75e-34 | FFCP PHASE2:Hg19::chr21:30000326..30000330,+#_172226a919bdf6dc24165e1c7f85b97c | p@chr21:30000326..30000330, + |
| 7.75e-34 | FFCP PHASE1:Hg19::chr21:30000326..30000330,+#_172226a919bdf6dc24165e1c7f85b97c | p@chr21:30000326..30000330, + |
| 6.67e-33 | FFCP PHASE1:Hg19::chr9:3898804..3898817,-#_e2c6359ff5d992207bdcaeb2a2973de8 | p@chr9:3898804..3898817, - |
| 6.67e-33 | FFCP PHASE2:Hg19::chr9:3898804..3898817,-#_e2c6359ff5d992207bdcaeb2a2973de8 | p@chr9:3898804..3898817, - |
| 9.62e-32 | FFCP PHASE2:Hg19::chr4:74702707..74702718,+#_b6e76de6ae8f9e88f0db852def618c4b | p7@CXCL6 |
| 9.62e-32 | FFCP PHASE1:Hg19::chr4:74702707..74702718,+#_b6e76de6ae8f9e88f0db852def618c4b | p7@CXCL6 |
| 2.86e-30 | FFCP PHASE2:Hg19::chr11:27723059..27723067,-#_f699ad3545368ed15025fe8ce4231e01 | p11@BDNF |
| 2.86e-30 | FFCP PHASE1:Hg19::chr11:27723059..27723067,-#_f699ad3545368ed15025fe8ce4231e01 | p11@BDNF |
| 6.35e-30 | FFCP PHASE2:Hg19::chr12:63025600..63025629,+#_0e245cf262e0fe0962671a57f82bc14f | p@chr12:63025600..63025629, + |
| 6.35e-30 | FFCP PHASE1:Hg19::chr12:63025600..63025629,+#_0e245cf262e0fe0962671a57f82bc14f | p@chr12:63025600..63025629, + |
| 1.14e-29 | FFCP PHASE1:Hg19::chr7:93515914..93515935,-#_c68f5473a18cb42f75484ef4f4124749 | p@chr7:93515914..93515935, - |
| 1.14e-29 | FFCP PHASE2:Hg19::chr7:93515914..93515935,-#_c68f5473a18cb42f75484ef4f4124749 | p@chr7:93515914..93515935, - |
| 3.44e-29 | FFCP PHASE2:Hg19::chr10:35930025..35930031,-#_34b7bb3fa95624b14e4cf9ada33b1ae9 | p1@FZD8 |
| 3.44e-29 | FFCP PHASE1:Hg19::chr10:35930025..35930031,-#_34b7bb3fa95624b14e4cf9ada33b1ae9 | p1@FZD8 |
| 5.33e-29 | FFCP PHASE1:Hg19::chrX:142113711..142113717,+#_48f7bff1c0e99d3402c00c31d9fbf7ef | p1@SPANXN4 |
| 5.33e-29 | FFCP PHASE2:Hg19::chrX:142113711..142113717,+#_48f7bff1c0e99d3402c00c31d9fbf7ef | p1@SPANXN4 |
| 1.16e-28 | FFCP PHASE2:Hg19::chr11:102662218..102662229,-#_bc39ce9332285a769c6c992ce633ba20 | p@chr11:102662218..102662229, - |
| 1.16e-28 | FFCP PHASE1:Hg19::chr11:102662218..102662229,-#_bc39ce9332285a769c6c992ce633ba20 | p@chr11:102662218..102662229, - |
| 2.11e-28 | FFCP PHASE2:Hg19::chr4:54931877..54931892,-#_5e77a3bf8b8354bf5bf57b4f91bd3d99 | p@chr4:54931877..54931892, - |
| 2.11e-28 | FFCP PHASE1:Hg19::chr4:54931877..54931892,-#_5e77a3bf8b8354bf5bf57b4f91bd3d99 | p@chr4:54931877..54931892, - |
| 4.13e-28 | FFCP PHASE1:Hg19::chr9:33797932..33797960,-#_cda08693c59b6d2baaf4347b837c5422 | p@chr9:33797932..33797960, - |
| 4.13e-28 | FFCP PHASE2:Hg19::chr9:33797932..33797960,-#_cda08693c59b6d2baaf4347b837c5422 | p@chr9:33797932..33797960, - |
| 5.46e-28 | FFCP PHASE2:Hg19::chr19:52076425..52076440,+#_6aab819142b2552138c28987c9701213 | p2@ZNF175 |
| 5.46e-28 | FFCP PHASE1:Hg19::chr19:52076425..52076440,+#_6aab819142b2552138c28987c9701213 | p2@ZNF175 |
| 5.51e-28 | FFCP PHASE1:Hg19::chr17:32583293..32583323,-#_83b40b9e86789506c003904327b9c1ab | p@chr17:32583293..32583323, - |
| 5.51e-28 | FFCP PHASE2:Hg19::chr17:32583293..32583323,-#_83b40b9e86789506c003904327b9c1ab | p@chr17:32583293..32583323, - |
| 8.03e-28 | FFCP PHASE2:Hg19::chr5:150157860..150157883,+#_9b169db323af9c3330985c777a96aaa4 | p4@C5orf62 |
| 8.03e-28 | FFCP PHASE1:Hg19::chr5:150157860..150157883,+#_9b169db323af9c3330985c777a96aaa4 | p4@C5orf62 |
| 1.46e-27 | FFCP PHASE2:Hg19::chr3:172351514..172351536,-#_2f9aabe7fa68127225598693e55c2fbe | p@chr3:172351514..172351536, - |
| 1.46e-27 | FFCP PHASE1:Hg19::chr3:172351514..172351536,-#_2f9aabe7fa68127225598693e55c2fbe | p@chr3:172351514..172351536, - |
| 1.66e-27 | FFCP PHASE1:Hg19::chr2:113587914..113587925,+#_c0f6aa0090b9c2eefd8422e942679cbc | p@chr2:113587914..113587925, + |
| 1.66e-27 | FFCP PHASE2:Hg19::chr2:113587914..113587925,+#_c0f6aa0090b9c2eefd8422e942679cbc | p@chr2:113587914..113587925, + |
| 2.38e-27 | FFCP PHASE2:Hg19::chr4:169022528..169022531,+#_cabb6d52c08a097e43d64a8fce8a116e | p@chr4:169022528..169022531, + |
| 2.38e-27 | FFCP PHASE1:Hg19::chr4:169022528..169022531,+#_cabb6d52c08a097e43d64a8fce8a116e | p@chr4:169022528..169022531, + |
| 2.72e-27 | FFCP PHASE2:Hg19::chr18:68919827..68919832,+#_2f8c6921cd5ff8269105569cd427dca8 | p@chr18:68919827..68919832, + |
| 2.72e-27 | FFCP PHASE1:Hg19::chr10:77056181..77056190,+#_2f8c6921cd5ff8269105569cd427dca8 | p2@ZNF503-AS1 |
| 2.72e-27 | FFCP PHASE1:Hg19::chr18:68919827..68919832,+#_2f8c6921cd5ff8269105569cd427dca8 | p@chr18:68919827..68919832, + |
| 2.72e-27 | FFCP PHASE2:Hg19::chr10:77056181..77056190,+#_2f8c6921cd5ff8269105569cd427dca8 | p2@ZNF503-AS1 |
| 4.63e-27 | FFCP PHASE2:Hg19::chr3:157206111..157206139,-#_414eadf56c820e9dcffa60c6d6a9f9ce | p@chr3:157206111..157206139, - |
| 4.63e-27 | FFCP PHASE1:Hg19::chr3:157206111..157206139,-#_414eadf56c820e9dcffa60c6d6a9f9ce | p@chr3:157206111..157206139, - |
| 4.63e-27 | FFCP PHASE2:Hg19::chr3:151514337..151514348,+#_414eadf56c820e9dcffa60c6d6a9f9ce | p@chr3:151514337..151514348, + |
| 4.63e-27 | FFCP PHASE1:Hg19::chr3:151514337..151514348,+#_414eadf56c820e9dcffa60c6d6a9f9ce | p@chr3:151514337..151514348, + |
| 6.82e-27 | FFCP PHASE1:Hg19::chr5:54281153..54281165,-#_570b210f969626cb38269c4a81504bc1 | p1@AB590689 |
| 6.82e-27 | FFCP PHASE2:Hg19::chr5:54281153..54281165,-#_570b210f969626cb38269c4a81504bc1 | p1@AB590689 |
| 7.86e-27 | FFCP PHASE2:Hg19::chr4:74902919..74902931,-#_33f7d737a041e67fc2cc9c01ea50f58b | p@chr4:74902919..74902931, - |
| 7.86e-27 | FFCP PHASE1:Hg19::chr4:74902919..74902931,-#_33f7d737a041e67fc2cc9c01ea50f58b | p@chr4:74902919..74902931, - |
| 9.32e-27 | FFCP PHASE2:Hg19::chr7:93519528..93519538,-#_df971fe4e1dfb4cdbe266fa31437df7e | p7@TFPI2 |
| 9.32e-27 | FFCP PHASE1:Hg19::chr7:93519528..93519538,-#_df971fe4e1dfb4cdbe266fa31437df7e | p7@TFPI2 |
| 1.7e-26 | FFCP PHASE1:Hg19::chr11:102668185..102668198,-#_bc9540de598c4dbf3c3fb5dcd4410b09 | p12@MMP1 |
| 1.7e-26 | FFCP PHASE2:Hg19::chr11:102668185..102668198,-#_bc9540de598c4dbf3c3fb5dcd4410b09 | p12@MMP1 |
| 3.65e-26 | FFCP PHASE2:Hg19::chr7:93519576..93519598,+#_ce2b76b6a5c8cc4726f44db1adea9c57 | p@chr7:93519576..93519598, + |
| 3.65e-26 | FFCP PHASE1:Hg19::chr7:93519576..93519598,+#_ce2b76b6a5c8cc4726f44db1adea9c57 | p@chr7:93519576..93519598, + |
| 4.43e-26 | FFCP PHASE2:Hg19::chr1:12010434..12010450,+#_f79a1d827ac0d88ea9a478a33ea76539 | p@chr1:12010434..12010450, + |
| 4.43e-26 | FFCP PHASE1:Hg19::chr1:12010434..12010450,+#_f79a1d827ac0d88ea9a478a33ea76539 | p@chr1:12010434..12010450, + |
| 4.97e-26 | FFCP PHASE2:Hg19::chr8:42042635..42042650,-#_58191bf7ee115b69131662a896ab9098 | p4@PLAT |
| 4.97e-26 | FFCP PHASE1:Hg19::chr8:42042635..42042650,-#_58191bf7ee115b69131662a896ab9098 | p4@PLAT |
| 8.4e-26 | FFCP PHASE1:Hg19::chr7:93515840..93515856,-#_5f40d28c03aae24b1043fb3c98b9cf4b | p@chr7:93515840..93515856, - |
| 8.4e-26 | FFCP PHASE2:Hg19::chr7:93515840..93515856,-#_5f40d28c03aae24b1043fb3c98b9cf4b | p@chr7:93515840..93515856, - |
| 2.89e-25 | FFCP PHASE2:Hg19::chr9:6257179..6257191,+#_990df721ca7eb7f93ddb97a42f8d6470 | p@chr9:6257179..6257191, + |
| 2.89e-25 | FFCP PHASE1:Hg19::chr9:6257179..6257191,+#_990df721ca7eb7f93ddb97a42f8d6470 | p@chr9:6257179..6257191, + |
| 3.95e-25 | FFCP PHASE2:Hg19::chr8:42044977..42044996,-#_e6f5639ef5719b2900c737161a72cd81 | p@chr8:42044977..42044996, - |
| 3.95e-25 | FFCP PHASE1:Hg19::chr8:42044977..42044996,-#_e6f5639ef5719b2900c737161a72cd81 | p@chr8:42044977..42044996, - |
| 4.18e-25 | FFCP PHASE1:Hg19::chr21:28216589..28216607,-#_30e4889406720b9fcaf096f8f97287a1 | p2@ADAMTS1 |
| 4.18e-25 | FFCP PHASE2:Hg19::chr21:28216589..28216607,-#_30e4889406720b9fcaf096f8f97287a1 | p2@ADAMTS1 |
| 1.2e-24 | FFCP PHASE2:Hg19::chr3:112081052..112081065,-#_2d6580ae7420231041e0b1c2f884a583 | p@chr3:112081052..112081065, - |
| 1.2e-24 | FFCP PHASE1:Hg19::chr3:112081052..112081065,-#_2d6580ae7420231041e0b1c2f884a583 | p@chr3:112081052..112081065, - |
| 2.08e-24 | FFCP PHASE1:Hg19::chr3:67141193..67141198,+#_29e007429a1fc1afe79c18e33372b86c | p@chr3:67141193..67141198, + |
| 2.08e-24 | FFCP PHASE2:Hg19::chr3:67141193..67141198,+#_29e007429a1fc1afe79c18e33372b86c | p@chr3:67141193..67141198, + |
| 4.08e-24 | FFCP PHASE1:Hg19::chr8:122653115..122653124,-#_54c21ec3705c0bc80109dae3a519536b | p7@HAS2 |
| 4.08e-24 | FFCP PHASE2:Hg19::chr8:122653115..122653124,-#_54c21ec3705c0bc80109dae3a519536b | p7@HAS2 |
| 4.76e-24 | FFCP PHASE2:Hg19::chr9:6256728..6256739,+#_6ec27fcfce77b25ec8ded5f04387f988 | p@chr9:6256728..6256739, + |
| 4.76e-24 | FFCP PHASE1:Hg19::chr9:6256728..6256739,+#_6ec27fcfce77b25ec8ded5f04387f988 | p@chr9:6256728..6256739, + |
| 6.41e-24 | FFCP PHASE2:Hg19::chr2:224839877..224839882,+#_5ed5b88c8e79c8163fedbc9a3fb2c198 | p@chr2:224839877..224839882, + |
| 6.41e-24 | FFCP PHASE1:Hg19::chr2:224839877..224839882,+#_5ed5b88c8e79c8163fedbc9a3fb2c198 | p@chr2:224839877..224839882, + |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Artery which supplies blood via branches to the various muscles of the shoulder region and to the forelimb.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "The pectoral (subclavian) arteries originate from the dorsal aorta and takes the blood outward into the fin from the paired portion of the dorsal aorta posterior to the last aortic arch. Kimmel et al. 1993[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
