UBERON:0002702: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=middle frontal gyrus | |name=middle frontal gyrus | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001870 | |part_of=UBERON:0001870 | ||
Latest revision as of 17:34, 12 September 2014
| Name: | middle frontal gyrus | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The middle frontal gyrus makes up about one-third of the frontal lobe of the human brain. (A gyrus is one of the prominent 'bumps' or 'ridges' on the surface of the human brain. ) The middle frontal gyrus, like the inferior frontal gyrus and the superior frontal gyrus, is more of a region than a true gyrus. The borders of the middle frontal gyrus are the inferior frontal sulcus below; the superior frontal sulcus above; and the precentral sulcus behind. [WP,unvetted]." [Wikipedia:Middle_frontal_gyrus] | ||
| Xrefs: |
| ||
| Synonyms: |
"gyrus frontalis medialis" EXACT [FMA:61859, FMA:TA] "gyrus frontalis medius" RELATED LATIN [Wikipedia:Middle_frontal_gyrus] "intermediate frontal gyrus" EXACT [FMA:61859] "medial frontal gyrus" EXACT [FMA:61859] | ||
| Alt_id: | UBERON:NIF_GrossAnatomy_birnlex_1451-FMA_61859 | ||
| Subset: | uberon_slim |
Middle_frontal_gyrus.png]
200px-Middle_frontal_gyrus.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0015593(frontal gyrus) |
|---|---|
| part_of: | UBERON:0001870(frontal cortex) |
Children
| is a: | FF:10150-102I6 (medial frontal gyrus, adult, donor10252),FF:10170-103B8 (medial frontal gyrus - adult, donor10196),FF:10352-105E1 (medial frontal gyrus, newborn, donor10223),FF:10368-105F8 (medial frontal gyrus, adult, donor10258) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10150-102I6 (medial frontal gyrus, adult, donor10252)
- 10170-103B8 (medial frontal gyrus - adult, donor10196)
- 10352-105E1 (medial frontal gyrus, newborn, donor10223)
- 10368-105F8 (medial frontal gyrus, adult, donor10258)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002702 (middle frontal gyrus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.75e-130 | FFCP PHASE2:Hg19::chr5:160720498..160720507,-#_9385e4162cb8925aa441e524d35d47fb | p@chr5:160720498..160720507, - |
| 1.75e-130 | FFCP PHASE1:Hg19::chr5:160720498..160720507,-#_9385e4162cb8925aa441e524d35d47fb | p@chr5:160720498..160720507, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:133275544..133275556,+#_f16a4099b2f4c5e359b668fd83a6c5e2 | p@chr6:133275544..133275556, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:133275544..133275556,+#_f16a4099b2f4c5e359b668fd83a6c5e2 | p@chr6:133275544..133275556, + |
| 2.56e-98 | FFCP PHASE1:Hg19::chr8:24773140..24773144,+#_f917bfbfac0f375f49d2cdbb45c240d3 | p20@NEFM |
| 2.56e-98 | FFCP PHASE2:Hg19::chr8:24773140..24773144,+#_f917bfbfac0f375f49d2cdbb45c240d3 | p20@NEFM |
| 3.49e-79 | FFCP PHASE1:Hg19::chr2:17830681..17830687,+#_413fda82d5adebfbb831c6291ace3968 | p@chr2:17830681..17830687, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr4:176828307..176828316,-#_413fda82d5adebfbb831c6291ace3968 | p35@GPM6A |
| 3.49e-79 | FFCP PHASE2:Hg19::chr2:17830681..17830687,+#_413fda82d5adebfbb831c6291ace3968 | p@chr2:17830681..17830687, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr4:176828307..176828316,-#_413fda82d5adebfbb831c6291ace3968 | p35@GPM6A |
| 7.79e-79 | FFCP PHASE2:Hg19::chr6:133275530..133275540,+#_97ba06ef42727b0e5de23e437844d3e7 | p@chr6:133275530..133275540, + |
| 7.79e-79 | FFCP PHASE1:Hg19::chr6:133275530..133275540,+#_97ba06ef42727b0e5de23e437844d3e7 | p@chr6:133275530..133275540, + |
| 1.16e-78 | FFCP PHASE1:Hg19::chr13:99174373..99174384,-#_60a07b0c13664c2577adaed469998d41 | p20@STK24 |
| 1.16e-78 | FFCP PHASE2:Hg19::chr13:99174373..99174384,-#_60a07b0c13664c2577adaed469998d41 | p20@STK24 |
| 2.03e-66 | FFCP PHASE2:Hg19::chr5:143108438..143108440,-#_06ebdaf0b83275e7cf7e1e20d636c09e | p@chr5:143108438..143108440, - |
| 2.03e-66 | FFCP PHASE1:Hg19::chr5:143108438..143108440,-#_06ebdaf0b83275e7cf7e1e20d636c09e | p@chr5:143108438..143108440, - |
| 2.84e-66 | FFCP PHASE1:Hg19::chr10:64136269..64136280,+#_d273c7187368d92a76c56aba626597c8 | p8@ZNF365 |
| 2.84e-66 | FFCP PHASE2:Hg19::chr10:64136269..64136280,+#_d273c7187368d92a76c56aba626597c8 | p8@ZNF365 |
| 5.53e-66 | FFCP PHASE2:Hg19::chr17:29623088..29623102,-#_9ba1777391b8205ed4b4fd47bf0b6344 | p6@OMG |
| 5.53e-66 | FFCP PHASE1:Hg19::chr2:86707340..86707351,+#_9ba1777391b8205ed4b4fd47bf0b6344 | p@chr2:86707340..86707351, + |
| 5.53e-66 | FFCP PHASE2:Hg19::chr2:86707340..86707351,+#_9ba1777391b8205ed4b4fd47bf0b6344 | p@chr2:86707340..86707351, + |
| 5.53e-66 | FFCP PHASE1:Hg19::chr17:29623088..29623102,-#_9ba1777391b8205ed4b4fd47bf0b6344 | p6@OMG |
| 7.73e-66 | FFCP PHASE1:Hg19::chr1:36181014..36181023,-#_cf32e4348c2f61305aa0a2b66c4069ca | p@chr1:36181014..36181023, - |
| 7.73e-66 | FFCP PHASE2:Hg19::chr1:36181014..36181023,-#_cf32e4348c2f61305aa0a2b66c4069ca | p@chr1:36181014..36181023, - |
| 1.51e-57 | FFCP PHASE2:Hg19::chr20:1260281..1260284,+#_55583f1600eaf001cab8d87bd3a82cde | p@chr20:1260281..1260284, + |
| 1.51e-57 | FFCP PHASE1:Hg19::chr20:1260281..1260284,+#_55583f1600eaf001cab8d87bd3a82cde | p@chr20:1260281..1260284, + |
| 4.77e-57 | FFCP PHASE1:Hg19::chr12:79843478..79843487,+#_9f787f863e4abe40cc72816c1608d103 | p@chr12:79843478..79843487, + |
| 4.77e-57 | FFCP PHASE2:Hg19::chr12:79843478..79843487,+#_9f787f863e4abe40cc72816c1608d103 | p@chr12:79843478..79843487, + |
| 8.47e-57 | FFCP PHASE1:Hg19::chr17:1029026..1029035,-#_92769bfb79f09d72291bb92b71242794 | p37@ABR |
| 8.47e-57 | FFCP PHASE1:Hg19::chr8:35828115..35828130,+#_92769bfb79f09d72291bb92b71242794 | p@chr8:35828115..35828130, + |
| 8.47e-57 | FFCP PHASE2:Hg19::chr17:1029026..1029035,-#_92769bfb79f09d72291bb92b71242794 | p37@ABR |
| 8.47e-57 | FFCP PHASE2:Hg19::chr8:35828115..35828130,+#_92769bfb79f09d72291bb92b71242794 | p@chr8:35828115..35828130, + |
| 8.47e-57 | FFCP PHASE1:Hg19::chr2:44554050..44554063,-#_92769bfb79f09d72291bb92b71242794 | p@chr2:44554050..44554063, - |
| 8.47e-57 | FFCP PHASE2:Hg19::chr2:44554050..44554063,-#_92769bfb79f09d72291bb92b71242794 | p@chr2:44554050..44554063, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr11:133197324..133197336,-#_8e0fdfe92c545a11e0269b79487a95b1 | p@chr11:133197324..133197336, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr11:133197324..133197336,-#_8e0fdfe92c545a11e0269b79487a95b1 | p@chr11:133197324..133197336, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chrX:134232704..134232705,-#_352fd5984f22a6f260df5f49b3c30482 | p4@LINC00087 |
| 2.74e-50 | FFCP PHASE1:Hg19::chr4:146071958..146071961,-#_352fd5984f22a6f260df5f49b3c30482 | p15@OTUD4 |
| 2.74e-50 | FFCP PHASE1:Hg19::chr8:27606125..27606134,-#_352fd5984f22a6f260df5f49b3c30482 | p6@CCDC25 |
| 2.74e-50 | FFCP PHASE2:Hg19::chr15:91643336..91643337,+#_352fd5984f22a6f260df5f49b3c30482 | p19@SV2B |
| 2.74e-50 | FFCP PHASE2:Hg19::chr8:27606125..27606134,-#_352fd5984f22a6f260df5f49b3c30482 | p6@CCDC25 |
| 2.74e-50 | FFCP PHASE2:Hg19::chrX:134232704..134232705,-#_352fd5984f22a6f260df5f49b3c30482 | p4@LINC00087 |
| 2.74e-50 | FFCP PHASE1:Hg19::chr15:91643336..91643337,+#_352fd5984f22a6f260df5f49b3c30482 | p19@SV2B |
| 2.74e-50 | FFCP PHASE2:Hg19::chr4:146071958..146071961,-#_352fd5984f22a6f260df5f49b3c30482 | p15@OTUD4 |
| 4.0e-50 | FFCP PHASE1:Hg19::chr2:166159804..166159805,+#_12fe6c384cc6f22ae9c507077ed7f69e | p@chr2:166159804..166159805, + |
| 4.0e-50 | FFCP PHASE2:Hg19::chr2:166159804..166159805,+#_12fe6c384cc6f22ae9c507077ed7f69e | p@chr2:166159804..166159805, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr5:27707663..27707672,+#_2912b4ec2b38ca087657da6bef9f1919 | p@chr5:27707663..27707672, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr5:44809742..44809753,+#_2912b4ec2b38ca087657da6bef9f1919 | p9@MRPS30 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr11:132901592..132901601,-#_2912b4ec2b38ca087657da6bef9f1919 | p@chr11:132901592..132901601, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr10:3442892..3442893,+#_2912b4ec2b38ca087657da6bef9f1919 | p@chr10:3442892..3442893, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr5:44809742..44809753,+#_2912b4ec2b38ca087657da6bef9f1919 | p9@MRPS30 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr6:73906231..73906237,+#_2912b4ec2b38ca087657da6bef9f1919 | p@chr6:73906231..73906237, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr6:73906231..73906237,+#_2912b4ec2b38ca087657da6bef9f1919 | p@chr6:73906231..73906237, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr14:72975302..72975305,+#_2912b4ec2b38ca087657da6bef9f1919 | p@chr14:72975302..72975305, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr11:132901592..132901601,-#_2912b4ec2b38ca087657da6bef9f1919 | p@chr11:132901592..132901601, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr10:3442892..3442893,+#_2912b4ec2b38ca087657da6bef9f1919 | p@chr10:3442892..3442893, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr5:19774915..19774916,-#_2912b4ec2b38ca087657da6bef9f1919 | p@chr5:19774915..19774916, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr5:19774915..19774916,-#_2912b4ec2b38ca087657da6bef9f1919 | p@chr5:19774915..19774916, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr14:72975302..72975305,+#_2912b4ec2b38ca087657da6bef9f1919 | p@chr14:72975302..72975305, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr5:27707663..27707672,+#_2912b4ec2b38ca087657da6bef9f1919 | p@chr5:27707663..27707672, + |
| 5.15e-50 | FFCP PHASE2:Hg19::chr6:112803862..112803893,+#_c67c095670499f2d6fc91bfd0fb6f658 | p@chr6:112803862..112803893, + |
| 5.15e-50 | FFCP PHASE1:Hg19::chr6:112803862..112803893,+#_c67c095670499f2d6fc91bfd0fb6f658 | p@chr6:112803862..112803893, + |
| 6.61e-50 | FFCP PHASE1:Hg19::chr7:82583500..82583510,-#_80d7349a8f426ae53d93cec766e1f759 | p@chr7:82583500..82583510, - |
| 6.61e-50 | FFCP PHASE2:Hg19::chr7:82583500..82583510,-#_80d7349a8f426ae53d93cec766e1f759 | p@chr7:82583500..82583510, - |
| 8.5e-50 | FFCP PHASE1:Hg19::chr2:60695331..60695343,-#_b7e59ab54c1c7658fe468cf01ae4fd13 | p@chr2:60695331..60695343, - |
| 8.5e-50 | FFCP PHASE2:Hg19::chr2:60695331..60695343,-#_b7e59ab54c1c7658fe468cf01ae4fd13 | p@chr2:60695331..60695343, - |
| 4.0e-45 | FFCP PHASE1:Hg19::chr15:31658349..31658358,+#_c966be7f55357aaa9cc206ef798e0a7f | p33@KLF13 |
| 4.0e-45 | FFCP PHASE2:Hg19::chr15:31658349..31658358,+#_c966be7f55357aaa9cc206ef798e0a7f | p33@KLF13 |
| 9.79e-45 | FFCP PHASE1:Hg19::chr3:49706223..49706234,+#_7795d558c3b8eface76e527db7d8bf66 | p@chr3:49706223..49706234, + |
| 9.79e-45 | FFCP PHASE2:Hg19::chr3:49706223..49706234,+#_7795d558c3b8eface76e527db7d8bf66 | p@chr3:49706223..49706234, + |
| 9.79e-45 | FFCP PHASE2:Hg19::chr4:143680975..143680979,-#_7795d558c3b8eface76e527db7d8bf66 | p@chr4:143680975..143680979, - |
| 9.79e-45 | FFCP PHASE1:Hg19::chr4:143680975..143680979,-#_7795d558c3b8eface76e527db7d8bf66 | p@chr4:143680975..143680979, - |
| 1.22e-44 | FFCP PHASE2:Hg19::chr13:89815478..89815491,-#_d805530e047e6aa48120d69083a8731e | p@chr13:89815478..89815491, - |
| 1.22e-44 | FFCP PHASE1:Hg19::chr3:121026029..121026045,+#_d805530e047e6aa48120d69083a8731e | p@chr3:121026029..121026045, + |
| 1.22e-44 | FFCP PHASE1:Hg19::chr13:89815478..89815491,-#_d805530e047e6aa48120d69083a8731e | p@chr13:89815478..89815491, - |
| 1.22e-44 | FFCP PHASE2:Hg19::chr3:121026029..121026045,+#_d805530e047e6aa48120d69083a8731e | p@chr3:121026029..121026045, + |
| 2.39e-44 | FFCP PHASE2:Hg19::chr5:21778572..21778576,-#_2fb99af862e51f4c70d5f5d3f4ccbc77 | p@chr5:21778572..21778576, - |
| 2.39e-44 | FFCP PHASE1:Hg19::chr5:21778572..21778576,-#_2fb99af862e51f4c70d5f5d3f4ccbc77 | p@chr5:21778572..21778576, - |
| 4.89e-41 | FFCP PHASE1:Hg19::chr21:16999470..16999481,-#_0dbe7e60b0310d8e8aa3109d864e8681 | p@chr21:16999470..16999481, - |
| 4.89e-41 | FFCP PHASE2:Hg19::chr21:16999470..16999481,-#_0dbe7e60b0310d8e8aa3109d864e8681 | p@chr21:16999470..16999481, - |
| 5.99e-41 | FFCP PHASE2:Hg19::chr5:165957466..165957467,-#_9d908edb1e17c6a4499100b4d590ee64 | p@chr5:165957466..165957467, - |
| 5.99e-41 | FFCP PHASE1:Hg19::chr5:165957466..165957467,-#_9d908edb1e17c6a4499100b4d590ee64 | p@chr5:165957466..165957467, - |
| 8.98e-41 | FFCP PHASE2:Hg19::chr6:69650460..69650462,+#_8b8ec7da0d3af3c9e7d1e52b72243fe3 | p@chr6:69650460..69650462, + |
| 8.98e-41 | FFCP PHASE1:Hg19::chr6:69650460..69650462,+#_8b8ec7da0d3af3c9e7d1e52b72243fe3 | p@chr6:69650460..69650462, + |
| 1.1e-40 | FFCP PHASE2:Hg19::chr18:5721892..5721909,+#_17fbf4ad7cfa278bbf856b869f419bd3 | p@chr18:5721892..5721909, + |
| 1.1e-40 | FFCP PHASE1:Hg19::chr18:5721892..5721909,+#_17fbf4ad7cfa278bbf856b869f419bd3 | p@chr18:5721892..5721909, + |
| 1.34e-40 | FFCP PHASE1:Hg19::chr17:57158545..57158556,-#_f46870f9941b9fb5425ebda4538c9fb7 | p@chr17:57158545..57158556, - |
| 1.34e-40 | FFCP PHASE2:Hg19::chr17:57158545..57158556,-#_f46870f9941b9fb5425ebda4538c9fb7 | p@chr17:57158545..57158556, - |
| 1.64e-40 | FFCP PHASE2:Hg19::chr7:32519192..32519195,-#_d1d329ae14770182495854c3dc7a2e16 | p@chr7:32519192..32519195, - |
| 1.64e-40 | FFCP PHASE2:Hg19::chr12:75601501..75601517,-#_d1d329ae14770182495854c3dc7a2e16 | p11@KCNC2 |
| 1.64e-40 | FFCP PHASE1:Hg19::chr12:75601501..75601517,-#_d1d329ae14770182495854c3dc7a2e16 | p11@KCNC2 |
| 1.64e-40 | FFCP PHASE2:Hg19::chr6:72926217..72926229,+#_d1d329ae14770182495854c3dc7a2e16 | p15@RIMS1 |
| 1.64e-40 | FFCP PHASE1:Hg19::chr7:32519192..32519195,-#_d1d329ae14770182495854c3dc7a2e16 | p@chr7:32519192..32519195, - |
| 1.64e-40 | FFCP PHASE1:Hg19::chr6:72926217..72926229,+#_d1d329ae14770182495854c3dc7a2e16 | p15@RIMS1 |
| 2.01e-40 | FFCP PHASE1:Hg19::chr12:121085388..121085391,+#_3fd2d2ceeaea387e974f69de43b4bcae | p@chr12:121085388..121085391, + |
| 2.01e-40 | FFCP PHASE1:Hg19::chr1:177152304..177152308,+#_3fd2d2ceeaea387e974f69de43b4bcae | p@chr1:177152304..177152308, + |
| 2.01e-40 | FFCP PHASE2:Hg19::chr12:79611427..79611436,+#_3fd2d2ceeaea387e974f69de43b4bcae | p3@AB384875 |
| 2.01e-40 | FFCP PHASE2:Hg19::chr1:177152304..177152308,+#_3fd2d2ceeaea387e974f69de43b4bcae | p@chr1:177152304..177152308, + |
| 2.01e-40 | FFCP PHASE1:Hg19::chr12:79611427..79611436,+#_3fd2d2ceeaea387e974f69de43b4bcae | p3@AB384875 |
| 2.01e-40 | FFCP PHASE2:Hg19::chr12:55368219..55368234,-#_3fd2d2ceeaea387e974f69de43b4bcae | p@chr12:55368219..55368234, - |
