UBERON:0003928: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=digestive system duct | |name=digestive system duct | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001007 | |part_of=UBERON:0001007 | ||
Latest revision as of 17:42, 12 September 2014
| Name: | digestive system duct | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A duct that is part of a digestive system [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"duct of digestive system" EXACT [OBOL:automatic] "duct of gastrointestinal system" EXACT [OBOL:automatic] "gastrointestinal system duct" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000058(duct) |
|---|---|
| part_of: | UBERON:0001007(digestive system) |
Children
| is a: | UBERON:0002394 (bile duct),UBERON:0004913 (hepatopancreatic ampulla),UBERON:0007329 (pancreatic duct) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB)
- 10432-106D9 (bile duct carcinoma cell line:HuCCT1)
- 10496-107C1 (bile duct carcinoma cell line:TFK-1)
- 10533-107G2
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10542-107H2
- 10627-108H6
- 10629-108H8
- 10630-108H9
- 11522-119I1
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003928 (digestive system duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:48685851..48685860,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr11:48685851..48685860, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:4336287..4336296,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p8@Map3k8 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:47491114..47491123,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr18:47491114..47491123, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:93499468..93499494,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr10:93499468..93499494, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:35881716..35881727,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr18:35881716..35881727, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:126939557..126939562,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr4:126939557..126939562, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:47491114..47491123,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr18:47491114..47491123, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35096519..35096524,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:35096519..35096524, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:86713876..86713879,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr8:86713876..86713879, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:88237840..88237851,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr12:88237840..88237851, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr10:85585991..85586025, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:45920408..45920437,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr9:45920408..45920437, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:60398371..60398393,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr18:60398371..60398393, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34796428..34796430,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:34796428..34796430, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:82207617..82207621,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr15:82207617..82207621, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:48822294..48822295, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:111108947..111108951,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr8:111108947..111108951, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr4:62009160..62009164, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr6:51831254..51831256, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr8:87745380..87745385, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:91441074..91441080,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr6:91441074..91441080, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:11183699..11183703,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr8:11183699..11183703, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr11:115280630..115280662, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34796428..34796430,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:34796428..34796430, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chrX:166418658..166418683,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chrX:166418658..166418683, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr12:86691575..86691580, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:32178407..32178408,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr15:32178407..32178408, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:64344878..64344887,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr5:64344878..64344887, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:28107053..28107062, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:107196799..107196814,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr11:107196799..107196814, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr8:3311867..3311873, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr13:113053257..113053258, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr10:94580525..94580530, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:100752983..100752984,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr12:100752983..100752984, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:133323630..133323631,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr2:133323630..133323631, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113550715..113550722,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr13:113550715..113550722, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr12:8400090..8400093, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chrX:166418658..166418683,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chrX:166418658..166418683, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr15:82209805..82209851, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr11:88890706..88890745, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:104857794..104857802,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr3:104857794..104857802, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p4@Pag1 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:4336287..4336296,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p8@Map3k8 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr13:100000226..100000230, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr10:8586393..8586401, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:35093764..35093773, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr8:86713876..86713879, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35093616..35093631,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:35093616..35093631, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:35900327..35900366,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr18:35900327..35900366, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:11009028..11009039,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p4@Gm4262 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:52781901..52781904,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr7:52781901..52781904, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr2:129407463..129407468, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:89310639..89310641,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr8:89310639..89310641, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:85801525..85801529,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p6@Adamts1 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:38831400..38831402,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr18:38831400..38831402, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:114123814..114123821,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr8:114123814..114123821, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:93819538..93819549,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr10:93819538..93819549, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:44793802..44793835,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr18:44793802..44793835, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr7:52781901..52781904, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:109223756..109223764,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr11:109223756..109223764, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:5840965..5840966,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr13:5840965..5840966, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113554186..113554192,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr13:113554186..113554192, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr6:48398664..48398684, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:88669906..88669914,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr15:88669906..88669914, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:81955014..81955018,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr12:81955014..81955018, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr5:64344878..64344887, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:137570295..137570315,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr1:137570295..137570315, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:5125608..5125613,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr18:5125608..5125613, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:93819538..93819549,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr10:93819538..93819549, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35106363..35106372,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:35106363..35106372, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:85288471..85288502,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr12:85288471..85288502, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:132405466..132405470,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr1:132405466..132405470, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:67870501..67870507,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:67870501..67870507, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:81955014..81955018,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr12:81955014..81955018, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:96429295..96429302,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr13:96429295..96429302, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:116223548..116223551,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr9:116223548..116223551, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr11:119254092..119254100, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr10:85586219..85586227, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34798555..34798562,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:34798555..34798562, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr16:30944451..30944485, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:30944451..30944485,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr16:30944451..30944485, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:82209805..82209851,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr15:82209805..82209851, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:11009028..11009039,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p4@Gm4262 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr6:15678147..15678149, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:91441786..91441787,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr16:91441786..91441787, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:51831254..51831256,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr6:51831254..51831256, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:117737077..117737096,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr11:117737077..117737096, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr19:29573929..29573932,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr19:29573929..29573932, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:48685851..48685860,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr11:48685851..48685860, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:115280630..115280662,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr11:115280630..115280662, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:42915101..42915106,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr9:42915101..42915106, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr7:118133901..118133904, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34798555..34798562,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:34798555..34798562, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:91441786..91441787,-#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr16:91441786..91441787, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:121593688..121593695,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr3:121593688..121593695, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:126939557..126939562,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr4:126939557..126939562, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr5:75375903..75375931, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr7:109031260..109031268, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35945332..35945335,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr17:35945332..35945335, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_f74c7e3398ca3e8b41131d1a5959c6e6 | p@chr18:5125608..5125613, + |
