UBERON:0005597: Difference between revisions
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|located_in= | |located_in= | ||
|name=lung primordium | |name=lung primordium | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0008947 | |part_of=UBERON:0008947 | ||
Latest revision as of 17:54, 12 September 2014
| Name: | lung primordium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A pair of lateral diverticula just over the liver rudiment representing the primordia of the lungs, formed by the floor of the foregut just anterior to the liver diverticulum." [XAO:0001002] | ||
| Xrefs: |
| ||
| Synonyms: | "lateral diverticula" RELATED [XAO:0001002] | ||
| Comments: | todo - check AAO diverticulum |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001048(primordium) |
|---|---|
| develops_from: | UBERON:0001041(foregut) |
| part_of: | UBERON:0008947(respiratory primordium) |
Children
| develops from: | UBERON:0000118 (lung bud) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005597 (lung primordium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.5e-81 | FFCP PHASE2:Mm9::chr11:85703335..85703350,+#_005ad38b2c17030c7ef90bf456bfc8e8 | p4@Tbx4 |
| 3.5e-81 | FFCP PHASE1:Mm9::chr11:85703335..85703350,+#_005ad38b2c17030c7ef90bf456bfc8e8 | p4@Tbx4 |
| 1.94e-76 | FFCP PHASE2:Mm9::chr11:85589157..85589190,-#_714fdbfddeb56586f43f27987981152e | p1@ENSMUST00000134305 |
| 1.94e-76 | FFCP PHASE1:Mm9::chr11:85589157..85589190,-#_714fdbfddeb56586f43f27987981152e | p1@ENSMUST00000134305 |
| 6.06e-75 | FFCP PHASE1:Mm9::chr11:85533239..85533252,-#_3ccfb1cc368722f6e6d637ea45e9ec39 | p1@ENSMUST00000146806, p1@ENSMUST00000151652, p1@uc007krv.1, p1@uc007krw.1 |
| 6.06e-75 | FFCP PHASE2:Mm9::chr11:85533239..85533252,-#_3ccfb1cc368722f6e6d637ea45e9ec39 | p1@ENSMUST00000146806, p1@ENSMUST00000151652, p1@uc007krv.1, p1@uc007krw.1 |
| 7.98e-75 | FFCP PHASE2:Mm9::chr11:85699562..85699575,+#_861a93f519cf330b11fde4e2d5a13f00 | p6@Tbx4 |
| 7.98e-75 | FFCP PHASE1:Mm9::chr11:85699562..85699575,+#_861a93f519cf330b11fde4e2d5a13f00 | p6@Tbx4 |
| 3.64e-74 | FFCP PHASE1:Mm9::chr8:94878479..94878503,-#_d43b7e509dc219011cdc3c86b84f13a9 | p@chr8:94878479..94878503, - |
| 3.64e-74 | FFCP PHASE2:Mm9::chr11:59457994..59457997,-#_d43b7e509dc219011cdc3c86b84f13a9 | p@chr11:59457994..59457997, - |
| 3.64e-74 | FFCP PHASE1:Mm9::chr12:57636003..57636017,-#_d43b7e509dc219011cdc3c86b84f13a9 | p@chr12:57636003..57636017, - |
| 3.64e-74 | FFCP PHASE1:Mm9::chr11:59457994..59457997,-#_d43b7e509dc219011cdc3c86b84f13a9 | p@chr11:59457994..59457997, - |
| 3.64e-74 | FFCP PHASE1:Mm9::chr12:57598716..57598720,-#_d43b7e509dc219011cdc3c86b84f13a9 | p@chr12:57598716..57598720, - |
| 3.64e-74 | FFCP PHASE2:Mm9::chr12:57636003..57636017,-#_d43b7e509dc219011cdc3c86b84f13a9 | p@chr12:57636003..57636017, - |
| 3.64e-74 | FFCP PHASE1:Mm9::chr4:138812977..138812992,+#_d43b7e509dc219011cdc3c86b84f13a9 | p@chr4:138812977..138812992, + |
| 3.64e-74 | FFCP PHASE2:Mm9::chr12:57598716..57598720,-#_d43b7e509dc219011cdc3c86b84f13a9 | p@chr12:57598716..57598720, - |
| 3.64e-74 | FFCP PHASE2:Mm9::chr4:138812977..138812992,+#_d43b7e509dc219011cdc3c86b84f13a9 | p@chr4:138812977..138812992, + |
| 3.64e-74 | FFCP PHASE2:Mm9::chr8:94878479..94878503,-#_d43b7e509dc219011cdc3c86b84f13a9 | p@chr8:94878479..94878503, - |
| 3.06e-70 | FFCP PHASE1:Mm9::chr12:57637649..57637665,-#_1fc60c3ee7c638e8fca5345b96d42fbf | p8@Nkx2-1 |
| 3.06e-70 | FFCP PHASE2:Mm9::chr12:57637649..57637665,-#_1fc60c3ee7c638e8fca5345b96d42fbf | p8@Nkx2-1 |
| 3.48e-70 | FFCP PHASE2:Mm9::chr12:57630487..57630498,-#_6219ef31674c0eff69bed3ff0c05d94d | p2@E030019B13Rik |
| 3.48e-70 | FFCP PHASE1:Mm9::chr12:57630487..57630498,-#_6219ef31674c0eff69bed3ff0c05d94d | p2@E030019B13Rik |
| 3.96e-70 | FFCP PHASE1:Mm9::chr2:17653019..17653038,-#_e4eed569e4ef029e919670d8f8d3a1d0 | p10@Nebl |
| 3.96e-70 | FFCP PHASE2:Mm9::chr2:17653019..17653038,-#_e4eed569e4ef029e919670d8f8d3a1d0 | p10@Nebl |
| 4.5e-70 | FFCP PHASE2:Mm9::chr12:57637700..57637717,-#_d898552ca17ba8f474238484d2d167ad | p9@Nkx2-1 |
| 4.5e-70 | FFCP PHASE1:Mm9::chr12:57637700..57637717,-#_d898552ca17ba8f474238484d2d167ad | p9@Nkx2-1 |
| 9.69e-69 | FFCP PHASE1:Mm9::chr12:57598537..57598547,-#_39f837c887ddd0ce60709668ed2f78a9 | p@chr12:57598537..57598547, - |
| 9.69e-69 | FFCP PHASE2:Mm9::chr19:18833097..18833135,+#_39f837c887ddd0ce60709668ed2f78a9 | p3@Trpm6 |
| 9.69e-69 | FFCP PHASE1:Mm9::chr12:57630364..57630373,-#_39f837c887ddd0ce60709668ed2f78a9 | p3@E030019B13Rik |
| 9.69e-69 | FFCP PHASE2:Mm9::chr12:57598537..57598547,-#_39f837c887ddd0ce60709668ed2f78a9 | p@chr12:57598537..57598547, - |
| 9.69e-69 | FFCP PHASE2:Mm9::chr12:57630364..57630373,-#_39f837c887ddd0ce60709668ed2f78a9 | p3@E030019B13Rik |
| 9.69e-69 | FFCP PHASE1:Mm9::chr19:18833097..18833135,+#_39f837c887ddd0ce60709668ed2f78a9 | p3@Trpm6 |
| 1.11e-68 | FFCP PHASE2:Mm9::chr14:115241755..115241762,-#_a5903cf75db3a16c48bb7b3000d317a3 | p@chr14:115241755..115241762, - |
| 1.11e-68 | FFCP PHASE1:Mm9::chr14:115241755..115241762,-#_a5903cf75db3a16c48bb7b3000d317a3 | p@chr14:115241755..115241762, - |
| 1.27e-68 | FFCP PHASE2:Mm9::chr4:138812999..138813015,+#_f682e54787f01f708bd962ce1eea13f6 | p@chr4:138812999..138813015, + |
| 1.27e-68 | FFCP PHASE1:Mm9::chr4:138812999..138813015,+#_f682e54787f01f708bd962ce1eea13f6 | p@chr4:138812999..138813015, + |
| 4.47e-68 | FFCP PHASE1:Mm9::chr5:120282691..120282701,+#_27f8f56aa02d7e92834484966c5e8cff | p@chr5:120282691..120282701, + |
| 4.47e-68 | FFCP PHASE2:Mm9::chr5:120282691..120282701,+#_27f8f56aa02d7e92834484966c5e8cff | p@chr5:120282691..120282701, + |
| 5.44e-68 | FFCP PHASE2:Mm9::chr2:66524237..66524246,-#_2520395157ed12708e2f04b3dbc30c56 | p@chr2:66524237..66524246, - |
| 5.44e-68 | FFCP PHASE2:Mm9::chr1:184610062..184610074,+#_2520395157ed12708e2f04b3dbc30c56 | p@chr1:184610062..184610074, + |
| 5.44e-68 | FFCP PHASE1:Mm9::chr2:66524237..66524246,-#_2520395157ed12708e2f04b3dbc30c56 | p@chr2:66524237..66524246, - |
| 5.44e-68 | FFCP PHASE2:Mm9::chr14:70922576..70922589,-#_2520395157ed12708e2f04b3dbc30c56 | p@chr14:70922576..70922589, - |
| 5.44e-68 | FFCP PHASE1:Mm9::chr6:72256828..72256859,+#_2520395157ed12708e2f04b3dbc30c56 | p3@Sftpb |
| 5.44e-68 | FFCP PHASE1:Mm9::chr6:72255924..72255936,+#_2520395157ed12708e2f04b3dbc30c56 | p4@Sftpb |
| 5.44e-68 | FFCP PHASE1:Mm9::chr14:70922576..70922589,-#_2520395157ed12708e2f04b3dbc30c56 | p@chr14:70922576..70922589, - |
| 5.44e-68 | FFCP PHASE2:Mm9::chr14:70921265..70921285,-#_2520395157ed12708e2f04b3dbc30c56 | p@chr14:70921265..70921285, - |
| 5.44e-68 | FFCP PHASE2:Mm9::chr6:72255924..72255936,+#_2520395157ed12708e2f04b3dbc30c56 | p4@Sftpb |
| 5.44e-68 | FFCP PHASE1:Mm9::chr1:184610062..184610074,+#_2520395157ed12708e2f04b3dbc30c56 | p@chr1:184610062..184610074, + |
| 5.44e-68 | FFCP PHASE2:Mm9::chr6:72256828..72256859,+#_2520395157ed12708e2f04b3dbc30c56 | p3@Sftpb |
| 5.44e-68 | FFCP PHASE1:Mm9::chr14:70921265..70921285,-#_2520395157ed12708e2f04b3dbc30c56 | p@chr14:70921265..70921285, - |
| 5.08e-66 | FFCP PHASE2:Mm9::chr12:57630443..57630450,-#_92cdc8cb1b87d8c07c2269e4f15847a8 | p4@E030019B13Rik |
| 5.08e-66 | FFCP PHASE1:Mm9::chr12:57630443..57630450,-#_92cdc8cb1b87d8c07c2269e4f15847a8 | p4@E030019B13Rik |
| 4.92e-64 | FFCP PHASE1:Mm9::chr12:57623172..57623185,-#_dd04a4d9d3bb653c95ccb7bbf47499af | p@chr12:57623172..57623185, - |
| 4.92e-64 | FFCP PHASE2:Mm9::chr14:70922007..70922052,+#_dd04a4d9d3bb653c95ccb7bbf47499af | p@chr14:70922007..70922052, + |
| 4.92e-64 | FFCP PHASE2:Mm9::chr12:57623172..57623185,-#_dd04a4d9d3bb653c95ccb7bbf47499af | p@chr12:57623172..57623185, - |
| 4.92e-64 | FFCP PHASE1:Mm9::chr14:70922007..70922052,+#_dd04a4d9d3bb653c95ccb7bbf47499af | p@chr14:70922007..70922052, + |
| 5.59e-64 | FFCP PHASE1:Mm9::chr5:28785436..28785450,-#_f5ec6523a4884a9ebe10dd4b6ea5e3f3 | p@chr5:28785436..28785450, - |
| 5.59e-64 | FFCP PHASE2:Mm9::chr5:28785436..28785450,-#_f5ec6523a4884a9ebe10dd4b6ea5e3f3 | p@chr5:28785436..28785450, - |
| 6.35e-64 | FFCP PHASE1:Mm9::chr14:70922459..70922482,-#_35df0b7b7a6ab864e9b5f4fc1ba05ecb | p@chr14:70922459..70922482, - |
| 6.35e-64 | FFCP PHASE2:Mm9::chr14:70922459..70922482,-#_35df0b7b7a6ab864e9b5f4fc1ba05ecb | p@chr14:70922459..70922482, - |
| 2.55e-63 | FFCP PHASE2:Mm9::chr16:22439804..22439806,-#_8832b21c4372df9e95b4185ee36e484c | p4@Etv5 |
| 2.55e-63 | FFCP PHASE1:Mm9::chr16:22439804..22439806,-#_8832b21c4372df9e95b4185ee36e484c | p4@Etv5 |
| 1.43e-62 | FFCP PHASE2:Mm9::chr6:72259797..72259814,+#_1966a4a2a328d97b78646a006fe6f206 | p@chr6:72259797..72259814, + |
| 1.43e-62 | FFCP PHASE2:Mm9::chr14:70922486..70922510,-#_1966a4a2a328d97b78646a006fe6f206 | p@chr14:70922486..70922510, - |
| 1.43e-62 | FFCP PHASE1:Mm9::chr14:70923240..70923251,-#_1966a4a2a328d97b78646a006fe6f206 | p@chr14:70923240..70923251, - |
| 1.43e-62 | FFCP PHASE2:Mm9::chr6:72264890..72264911,+#_1966a4a2a328d97b78646a006fe6f206 | p@chr6:72264890..72264911, + |
| 1.43e-62 | FFCP PHASE1:Mm9::chr16:19706386..19706390,-#_1966a4a2a328d97b78646a006fe6f206 | p4@Lamp3 |
| 1.43e-62 | FFCP PHASE1:Mm9::chr14:70922486..70922510,-#_1966a4a2a328d97b78646a006fe6f206 | p@chr14:70922486..70922510, - |
| 1.43e-62 | FFCP PHASE1:Mm9::chr6:72259797..72259814,+#_1966a4a2a328d97b78646a006fe6f206 | p@chr6:72259797..72259814, + |
| 1.43e-62 | FFCP PHASE2:Mm9::chr6:72264418..72264441,+#_1966a4a2a328d97b78646a006fe6f206 | p@chr6:72264418..72264441, + |
| 1.43e-62 | FFCP PHASE1:Mm9::chr6:72264890..72264911,+#_1966a4a2a328d97b78646a006fe6f206 | p@chr6:72264890..72264911, + |
| 1.43e-62 | FFCP PHASE2:Mm9::chr16:19706386..19706390,-#_1966a4a2a328d97b78646a006fe6f206 | p4@Lamp3 |
| 1.43e-62 | FFCP PHASE2:Mm9::chr6:72263977..72263993,+#_1966a4a2a328d97b78646a006fe6f206 | p@chr6:72263977..72263993, + |
| 1.43e-62 | FFCP PHASE1:Mm9::chr6:72263977..72263993,+#_1966a4a2a328d97b78646a006fe6f206 | p@chr6:72263977..72263993, + |
| 1.43e-62 | FFCP PHASE2:Mm9::chr12:57376690..57376716,-#_1966a4a2a328d97b78646a006fe6f206 | p@chr12:57376690..57376716, - |
| 1.43e-62 | FFCP PHASE1:Mm9::chr6:72264418..72264441,+#_1966a4a2a328d97b78646a006fe6f206 | p@chr6:72264418..72264441, + |
| 1.43e-62 | FFCP PHASE2:Mm9::chr14:70923240..70923251,-#_1966a4a2a328d97b78646a006fe6f206 | p@chr14:70923240..70923251, - |
| 1.43e-62 | FFCP PHASE1:Mm9::chr12:57376690..57376716,-#_1966a4a2a328d97b78646a006fe6f206 | p@chr12:57376690..57376716, - |
| 1.63e-62 | FFCP PHASE2:Mm9::chr6:72264609..72264653,-#_cd5f1a3288d24fbdb072b7e2748984f9 | p@chr6:72264609..72264653, - |
| 1.63e-62 | FFCP PHASE1:Mm9::chr6:72264609..72264653,-#_cd5f1a3288d24fbdb072b7e2748984f9 | p@chr6:72264609..72264653, - |
| 1.87e-62 | FFCP PHASE2:Mm9::chr6:129378567..129378573,-#_379670aee6a59f0ae18974728e0d38b9 | p@chr6:129378567..129378573, - |
| 1.87e-62 | FFCP PHASE1:Mm9::chr6:129378567..129378573,-#_379670aee6a59f0ae18974728e0d38b9 | p@chr6:129378567..129378573, - |
| 1.91e-62 | FFCP PHASE1:Mm9::chr3:122432836..122432847,+#_84ca5cd0effc6ffa131d04480da8d087 | p16@Pde5a |
| 1.91e-62 | FFCP PHASE2:Mm9::chr3:122432836..122432847,+#_84ca5cd0effc6ffa131d04480da8d087 | p16@Pde5a |
| 3.02e-62 | FFCP PHASE2:Mm9::chr12:57637595..57637608,-#_086194141e6e69691cdc0c8f658ab879 | p7@Nkx2-1 |
| 3.02e-62 | FFCP PHASE1:Mm9::chr12:57637595..57637608,-#_086194141e6e69691cdc0c8f658ab879 | p7@Nkx2-1 |
| 5.06e-62 | FFCP PHASE2:Mm9::chr12:57636936..57636953,-#_714f8c5137e262667bdc287079746e05 | p@chr12:57636936..57636953, - |
| 5.06e-62 | FFCP PHASE1:Mm9::chr12:57636936..57636953,-#_714f8c5137e262667bdc287079746e05 | p@chr12:57636936..57636953, - |
| 7.58e-62 | FFCP PHASE1:Mm9::chr17:67043399..67043410,-#_985f89ddb8436a648b17725b6ff663f1 | p9@Ptprm |
| 7.58e-62 | FFCP PHASE1:Mm9::chr5:28785382..28785394,-#_985f89ddb8436a648b17725b6ff663f1 | p@chr5:28785382..28785394, - |
| 7.58e-62 | FFCP PHASE1:Mm9::chr2:126950686..126950702,-#_985f89ddb8436a648b17725b6ff663f1 | p@chr2:126950686..126950702, - |
| 7.58e-62 | FFCP PHASE1:Mm9::chr14:41949922..41949935,+#_985f89ddb8436a648b17725b6ff663f1 | p@chr14:41949922..41949935, + |
| 7.58e-62 | FFCP PHASE1:Mm9::chr6:72259749..72259765,+#_985f89ddb8436a648b17725b6ff663f1 | p@chr6:72259749..72259765, + |
| 7.58e-62 | FFCP PHASE1:Mm9::chr6:72264657..72264693,-#_985f89ddb8436a648b17725b6ff663f1 | p@chr6:72264657..72264693, - |
| 7.58e-62 | FFCP PHASE2:Mm9::chr12:57630433..57630438,-#_985f89ddb8436a648b17725b6ff663f1 | p6@E030019B13Rik |
| 7.58e-62 | FFCP PHASE2:Mm9::chr16:19673341..19673350,-#_985f89ddb8436a648b17725b6ff663f1 | p@chr16:19673341..19673350, - |
| 7.58e-62 | FFCP PHASE1:Mm9::chr12:57630433..57630438,-#_985f89ddb8436a648b17725b6ff663f1 | p6@E030019B13Rik |
| 7.58e-62 | FFCP PHASE1:Mm9::chr14:70931508..70931519,+#_985f89ddb8436a648b17725b6ff663f1 | p@chr14:70931508..70931519, + |
| 7.58e-62 | FFCP PHASE2:Mm9::chr14:41951096..41951112,+#_985f89ddb8436a648b17725b6ff663f1 | p@chr14:41951096..41951112, + |
| 7.58e-62 | FFCP PHASE2:Mm9::chr14:41949964..41949979,+#_985f89ddb8436a648b17725b6ff663f1 | p@chr14:41949964..41949979, + |
