UBERON:0007273: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=pelvic appendage skeleton | |name=pelvic appendage skeleton | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0004709 | |part_of=UBERON:0004709 | ||
Latest revision as of 18:00, 12 September 2014
| Name: | pelvic appendage skeleton |
|---|---|
| Namespace: | FANTOM |
| Definition: | "The collection of all skeletal elements in a pelvic appendage region." [UBERON:cjm] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0011582(paired limb/fin skeleton) |
|---|---|
| part_of: | UBERON:0004709(pelvic appendage) |
Children
| is a: | UBERON:0001441 (hindlimb skeleton) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 1350-25C3 (bone (os femoris), neonate N20)
- 1525-43A6 (bone (os femoris), neonate N16)
- 1985-43F5 (bone (os femoris), neonate N02)
- 56-12G2 (bone (os femoris), adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007273 (pelvic appendage skeleton), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.4e-49 | FFCP PHASE1:Mm9::chr11:77624716..77624729,+#_cbdd009d5ae8fc767af59734fd6ccc91 | p26@Myo18a |
| 3.4e-49 | FFCP PHASE2:Mm9::chr11:77624716..77624729,+#_cbdd009d5ae8fc767af59734fd6ccc91 | p26@Myo18a |
| 4.96e-49 | FFCP PHASE2:Mm9::chr2:32482372..32482381,+#_79db1e51ede2c12c94a492b5c524128c | p@chr2:32482372..32482381, + |
| 4.96e-49 | FFCP PHASE2:Mm9::chr9:21934585..21934591,-#_79db1e51ede2c12c94a492b5c524128c | p@chr9:21934585..21934591, - |
| 4.96e-49 | FFCP PHASE1:Mm9::chr8:75097542..75097549,+#_79db1e51ede2c12c94a492b5c524128c | p@chr8:75097542..75097549, + |
| 4.96e-49 | FFCP PHASE1:Mm9::chr2:32482372..32482381,+#_79db1e51ede2c12c94a492b5c524128c | p@chr2:32482372..32482381, + |
| 4.96e-49 | FFCP PHASE2:Mm9::chr8:75097542..75097549,+#_79db1e51ede2c12c94a492b5c524128c | p@chr8:75097542..75097549, + |
| 4.96e-49 | FFCP PHASE1:Mm9::chr9:21934585..21934591,-#_79db1e51ede2c12c94a492b5c524128c | p@chr9:21934585..21934591, - |
| 3.15e-44 | FFCP PHASE2:Mm9::chr6:51525810..51525817,+#_f0b4e109de7b487cbd7a71aa8b48ac31 | p@chr6:51525810..51525817, + |
| 3.15e-44 | FFCP PHASE1:Mm9::chr6:51525810..51525817,+#_f0b4e109de7b487cbd7a71aa8b48ac31 | p@chr6:51525810..51525817, + |
| 9.78e-40 | FFCP PHASE1:Mm9::chr19:4876870..4876880,-#_2d232bdae6ccd18c90c62992c8f0f2ae | p@chr19:4876870..4876880, - |
| 9.78e-40 | FFCP PHASE2:Mm9::chr19:4876870..4876880,-#_2d232bdae6ccd18c90c62992c8f0f2ae | p@chr19:4876870..4876880, - |
| 1.15e-39 | FFCP PHASE1:Mm9::chr1:174140324..174140335,-#_cb20eb19b14caf8b86854a3ebe8ef022 | p@chr1:174140324..174140335, - |
| 1.15e-39 | FFCP PHASE2:Mm9::chr11:67063327..67063335,+#_cb20eb19b14caf8b86854a3ebe8ef022 | p@chr11:67063327..67063335, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr16:24096441..24096449,+#_cb20eb19b14caf8b86854a3ebe8ef022 | p@chr16:24096441..24096449, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr6:4490674..4490679,+#_cb20eb19b14caf8b86854a3ebe8ef022 | p@chr6:4490674..4490679, + |
| 1.15e-39 | FFCP PHASE2:Mm9::chr6:4490674..4490679,+#_cb20eb19b14caf8b86854a3ebe8ef022 | p@chr6:4490674..4490679, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr11:67063327..67063335,+#_cb20eb19b14caf8b86854a3ebe8ef022 | p@chr11:67063327..67063335, + |
| 1.15e-39 | FFCP PHASE2:Mm9::chr16:24096441..24096449,+#_cb20eb19b14caf8b86854a3ebe8ef022 | p@chr16:24096441..24096449, + |
| 1.15e-39 | FFCP PHASE2:Mm9::chr1:174140324..174140335,-#_cb20eb19b14caf8b86854a3ebe8ef022 | p@chr1:174140324..174140335, - |
| 1.55e-39 | FFCP PHASE1:Mm9::chr1:174143249..174143260,-#_a8effd52210a14eff395205233093b2c | p@chr1:174143249..174143260, - |
| 1.55e-39 | FFCP PHASE2:Mm9::chr1:174143249..174143260,-#_a8effd52210a14eff395205233093b2c | p@chr1:174143249..174143260, - |
| 3.03e-39 | FFCP PHASE1:Mm9::chr6:51525869..51525891,+#_d850d731a58221d4c2d9019f953073bc | p@chr6:51525869..51525891, + |
| 3.03e-39 | FFCP PHASE2:Mm9::chr6:51525869..51525891,+#_d850d731a58221d4c2d9019f953073bc | p@chr6:51525869..51525891, + |
| 9.31e-39 | FFCP PHASE1:Mm9::chr11:102130083..102130092,+#_60fe5dc85a8b88b8fe68e910f871cb78 | p3@Asb16 |
| 9.31e-39 | FFCP PHASE2:Mm9::chr11:102130083..102130092,+#_60fe5dc85a8b88b8fe68e910f871cb78 | p3@Asb16 |
| 2.41e-35 | FFCP PHASE1:Mm9::chr7:133604286..133604297,-#_c759966b4c0b679df15f8a7e2f3846b7 | p@chr7:133604286..133604297, - |
| 2.41e-35 | FFCP PHASE2:Mm9::chr7:133604286..133604297,-#_c759966b4c0b679df15f8a7e2f3846b7 | p@chr7:133604286..133604297, - |
| 2.95e-35 | FFCP PHASE2:Mm9::chr4:138365748..138365759,-#_f08bfc2e2d1b8b3f81fe490c106d6375 | p5@Pla2g5 |
| 2.95e-35 | FFCP PHASE1:Mm9::chr4:138365748..138365759,-#_f08bfc2e2d1b8b3f81fe490c106d6375 | p5@Pla2g5 |
| 9.53e-34 | FFCP PHASE2:Mm9::chr8:74049600..74049612,-#_3b9d022cc34ddf2f822ad3b9e6de31e4 | p2@uc009mdq.1 |
| 9.53e-34 | FFCP PHASE1:Mm9::chr8:74049600..74049612,-#_3b9d022cc34ddf2f822ad3b9e6de31e4 | p2@uc009mdq.1 |
| 1.23e-33 | FFCP PHASE2:Mm9::chr2:164773241..164773248,+#_afcba6cdd47b475cb3e73ccae816e9b5 | p3@Mmp9 |
| 1.23e-33 | FFCP PHASE1:Mm9::chr2:164773241..164773248,+#_afcba6cdd47b475cb3e73ccae816e9b5 | p3@Mmp9 |
| 1.58e-33 | FFCP PHASE1:Mm9::chr7:3567707..3567718,-#_33ee0a572133ece48465c5eccf6acda5 | p2@Oscar |
| 1.58e-33 | FFCP PHASE2:Mm9::chr7:3567707..3567718,-#_33ee0a572133ece48465c5eccf6acda5 | p2@Oscar |
| 1.58e-33 | FFCP PHASE2:Mm9::chr1:166815111..166815121,-#_33ee0a572133ece48465c5eccf6acda5 | p@chr1:166815111..166815121, - |
| 1.58e-33 | FFCP PHASE1:Mm9::chr1:166815111..166815121,-#_33ee0a572133ece48465c5eccf6acda5 | p@chr1:166815111..166815121, - |
| 2.04e-33 | FFCP PHASE2:Mm9::chr11:75409652..75409664,+#_0078476513dfea7fb605458ae914b9e2 | p@chr11:75409652..75409664, + |
| 2.04e-33 | FFCP PHASE1:Mm9::chr9:70799951..70799962,-#_0078476513dfea7fb605458ae914b9e2 | p4@Lipc |
| 2.04e-33 | FFCP PHASE2:Mm9::chr9:70799951..70799962,-#_0078476513dfea7fb605458ae914b9e2 | p4@Lipc |
| 2.04e-33 | FFCP PHASE1:Mm9::chr11:75409652..75409664,+#_0078476513dfea7fb605458ae914b9e2 | p@chr11:75409652..75409664, + |
| 3.38e-33 | FFCP PHASE1:Mm9::chr15:102196702..102196713,-#_12970b629bd7927ac42a624673c72176 | p6@Sp7 |
| 3.38e-33 | FFCP PHASE2:Mm9::chr15:102196702..102196713,-#_12970b629bd7927ac42a624673c72176 | p6@Sp7 |
| 7.17e-33 | FFCP PHASE2:Mm9::chr18:76271498..76271508,+#_1874db1e1ecd20e3f99b382fbbf26113 | p@chr18:76271498..76271508, + |
| 7.17e-33 | FFCP PHASE1:Mm9::chr8:126415826..126415839,+#_1874db1e1ecd20e3f99b382fbbf26113 | p@chr8:126415826..126415839, + |
| 7.17e-33 | FFCP PHASE2:Mm9::chr8:126415826..126415839,+#_1874db1e1ecd20e3f99b382fbbf26113 | p@chr8:126415826..126415839, + |
| 7.17e-33 | FFCP PHASE1:Mm9::chr18:76271498..76271508,+#_1874db1e1ecd20e3f99b382fbbf26113 | p@chr18:76271498..76271508, + |
| 2.67e-30 | FFCP PHASE2:Mm9::chr2:32482387..32482399,+#_ab3972a2a60cf007e6b55b967a457f00 | p@chr2:32482387..32482399, + |
| 2.67e-30 | FFCP PHASE1:Mm9::chr2:32482387..32482399,+#_ab3972a2a60cf007e6b55b967a457f00 | p@chr2:32482387..32482399, + |
| 1.1e-29 | FFCP PHASE2:Mm9::chr12:70396969..70396979,+#_cc34ce0e6b6d51ddb0b49cca8aefdd3c | p@chr12:70396969..70396979, + |
| 1.1e-29 | FFCP PHASE1:Mm9::chr12:70396969..70396979,+#_cc34ce0e6b6d51ddb0b49cca8aefdd3c | p@chr12:70396969..70396979, + |
| 1.1e-29 | FFCP PHASE2:Mm9::chr15:58649683..58649688,-#_cc34ce0e6b6d51ddb0b49cca8aefdd3c | p@chr15:58649683..58649688, - |
| 1.1e-29 | FFCP PHASE1:Mm9::chr15:58649683..58649688,-#_cc34ce0e6b6d51ddb0b49cca8aefdd3c | p@chr15:58649683..58649688, - |
| 1.46e-29 | FFCP PHASE1:Mm9::chr7:133590998..133591009,-#_39bbf76b8c39003955da196079b8281b | p@chr7:133590998..133591009, - |
| 1.46e-29 | FFCP PHASE2:Mm9::chr7:133590998..133591009,-#_39bbf76b8c39003955da196079b8281b | p@chr7:133590998..133591009, - |
| 1.73e-29 | FFCP PHASE2:Mm9::chr18:60751417..60751432,-#_9f4ea12a367e2b26d35767144f49bc43 | p2@Myoz3 |
| 1.73e-29 | FFCP PHASE1:Mm9::chr18:60751417..60751432,-#_9f4ea12a367e2b26d35767144f49bc43 | p2@Myoz3 |
| 2.42e-29 | FFCP PHASE2:Mm9::chr11:67051354..67051366,+#_771696e226bb5ee333baa94483ade808 | p2@Myh4 |
| 2.42e-29 | FFCP PHASE1:Mm9::chr11:67051354..67051366,+#_771696e226bb5ee333baa94483ade808 | p2@Myh4 |
| 7.46e-29 | FFCP PHASE1:Mm9::chr1:57155729..57155740,-#_3312e9d365b0e0d4db682ca1e594b2f4 | p@chr1:57155729..57155740, - |
| 7.46e-29 | FFCP PHASE2:Mm9::chr1:57155729..57155740,-#_3312e9d365b0e0d4db682ca1e594b2f4 | p@chr1:57155729..57155740, - |
| 9.26e-29 | FFCP PHASE1:Mm9::chr11:67056544..67056589,-#_0c4656d6ca5b3d97253c89c6b15ef47c | p@chr11:67056544..67056589, - |
| 9.26e-29 | FFCP PHASE1:Mm9::chr4:43597258..43597265,-#_0c4656d6ca5b3d97253c89c6b15ef47c | p1@Msmp |
| 9.26e-29 | FFCP PHASE2:Mm9::chr11:67056544..67056589,-#_0c4656d6ca5b3d97253c89c6b15ef47c | p@chr11:67056544..67056589, - |
| 9.26e-29 | FFCP PHASE2:Mm9::chr4:43597258..43597265,-#_0c4656d6ca5b3d97253c89c6b15ef47c | p1@Msmp |
| 1.15e-28 | FFCP PHASE2:Mm9::chrY:2858251..2858257,+#_5265cdd7807b817363ba32b864d0959a | p@chrY:2858251..2858257, + |
| 1.15e-28 | FFCP PHASE2:Mm9::chr6:90552017..90552024,+#_5265cdd7807b817363ba32b864d0959a | p@chr6:90552017..90552024, + |
| 1.15e-28 | FFCP PHASE1:Mm9::chr6:90552017..90552024,+#_5265cdd7807b817363ba32b864d0959a | p@chr6:90552017..90552024, + |
| 1.15e-28 | FFCP PHASE1:Mm9::chrY:2858251..2858257,+#_5265cdd7807b817363ba32b864d0959a | p@chrY:2858251..2858257, + |
| 1.43e-28 | FFCP PHASE1:Mm9::chr6:34436258..34436292,+#_c467f6f274fee4cfec725fcf20651eae | p@chr6:34436258..34436292, + |
| 1.43e-28 | FFCP PHASE2:Mm9::chr6:34436258..34436292,+#_c467f6f274fee4cfec725fcf20651eae | p@chr6:34436258..34436292, + |
| 2.2e-28 | FFCP PHASE2:Mm9::chr11:67069796..67069817,-#_4e3674f1c3551c0c51f082a262b8534f | p@chr11:67069796..67069817, - |
| 2.2e-28 | FFCP PHASE1:Mm9::chr11:67069796..67069817,-#_4e3674f1c3551c0c51f082a262b8534f | p@chr11:67069796..67069817, - |
| 2.72e-28 | FFCP PHASE2:Mm9::chr8:107702369..107702386,+#_6a3aff46039b539d6ae337617620f9d7 | p@chr8:107702369..107702386, + |
| 2.72e-28 | FFCP PHASE1:Mm9::chr8:107702369..107702386,+#_6a3aff46039b539d6ae337617620f9d7 | p@chr8:107702369..107702386, + |
| 3.45e-28 | FFCP PHASE1:Mm9::chr18:78254135..78254146,-#_7ee5488bf67be80032f14bee9ceedc9d | p1@Siglec15 |
| 3.45e-28 | FFCP PHASE2:Mm9::chr18:78254135..78254146,-#_7ee5488bf67be80032f14bee9ceedc9d | p1@Siglec15 |
| 6.5e-28 | FFCP PHASE2:Mm9::chr7:133591490..133591500,-#_0c43f9c974a2e515ca815d62dc948c0e | p6@Atp2a1 |
| 6.5e-28 | FFCP PHASE1:Mm9::chr7:133591490..133591500,-#_0c43f9c974a2e515ca815d62dc948c0e | p6@Atp2a1 |
| 8.9e-28 | FFCP PHASE2:Mm9::chr7:133591156..133591165,-#_14e6423d316c3c8fcd6ac262c8f0f0e2 | p7@Atp2a1 |
| 8.9e-28 | FFCP PHASE1:Mm9::chr7:133591156..133591165,-#_14e6423d316c3c8fcd6ac262c8f0f0e2 | p7@Atp2a1 |
| 1.42e-27 | FFCP PHASE2:Mm9::chr7:133600635..133600663,+#_7a08db5e70bd3a078a3723624b17608c | p@chr7:133600635..133600663, + |
| 1.42e-27 | FFCP PHASE1:Mm9::chr7:133600635..133600663,+#_7a08db5e70bd3a078a3723624b17608c | p@chr7:133600635..133600663, + |
| 1.42e-27 | FFCP PHASE2:Mm9::chr7:133592162..133592188,-#_7a08db5e70bd3a078a3723624b17608c | p@chr7:133592162..133592188, - |
| 1.42e-27 | FFCP PHASE1:Mm9::chr7:133592162..133592188,-#_7a08db5e70bd3a078a3723624b17608c | p@chr7:133592162..133592188, - |
| 6.75e-27 | FFCP PHASE2:Mm9::chr11:94837662..94837673,-#_1788280b8d7b37daaed873174b179f4a | p4@Sgca |
| 6.75e-27 | FFCP PHASE1:Mm9::chr11:94837662..94837673,-#_1788280b8d7b37daaed873174b179f4a | p4@Sgca |
| 1.66e-26 | FFCP PHASE1:Mm9::chr5:104754379..104754387,+#_7e0a6048362bccc8b2091026a76a9c9c | p1@Mepe |
| 1.66e-26 | FFCP PHASE2:Mm9::chr5:104754379..104754387,+#_7e0a6048362bccc8b2091026a76a9c9c | p1@Mepe |
| 3.47e-26 | FFCP PHASE1:Mm9::chr16:32400888..32400899,+#_469c4a3106fd1e8a8eb945ab8098575e | p2@Tm4sf19 |
| 3.47e-26 | FFCP PHASE2:Mm9::chr12:81581216..81581231,+#_469c4a3106fd1e8a8eb945ab8098575e | p@chr12:81581216..81581231, + |
| 3.47e-26 | FFCP PHASE1:Mm9::chr12:81581216..81581231,+#_469c4a3106fd1e8a8eb945ab8098575e | p@chr12:81581216..81581231, + |
| 3.47e-26 | FFCP PHASE2:Mm9::chr16:32400888..32400899,+#_469c4a3106fd1e8a8eb945ab8098575e | p2@Tm4sf19 |
| 1.12e-25 | FFCP PHASE2:Mm9::chr17:34176173..34176200,+#_6b22140f90f9226e5ca4aa8b4feea6ac | p5@Col11a2 |
| 1.12e-25 | FFCP PHASE1:Mm9::chr15:97806574..97806585,-#_6b22140f90f9226e5ca4aa8b4feea6ac | p@chr15:97806574..97806585, - |
| 1.12e-25 | FFCP PHASE2:Mm9::chr15:97806574..97806585,-#_6b22140f90f9226e5ca4aa8b4feea6ac | p@chr15:97806574..97806585, - |
| 1.12e-25 | FFCP PHASE1:Mm9::chr17:34176173..34176200,+#_6b22140f90f9226e5ca4aa8b4feea6ac | p5@Col11a2 |
| 1.36e-25 | FFCP PHASE1:Mm9::chr2:180890942..180890956,-#_090347f3f1bcfabfc6013c52bd987478 | p@chr2:180890942..180890956, - |
| 1.36e-25 | FFCP PHASE1:Mm9::chr18:78254174..78254185,-#_090347f3f1bcfabfc6013c52bd987478 | p2@Siglec15 |
