UBERON:0003838: Difference between revisions
From FANTOM5_SSTAR
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Revision as of 17:19, 15 June 2012
Name: | abdominal segment connective tissue | ||
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Definition: | "A portion of connective tissue that is part of an abdominal segment of trunk [Obol]." [OBOL:automatic] | ||
Xrefs: |
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Synonyms: |
"abdominal segment of trunk connective tissue" EXACT [OBOL:automatic] "abdominal segment of trunk portion of connective tissue" EXACT [OBOL:automatic] "abdominal segment of trunk textus connectivus" EXACT [OBOL:automatic] "connective tissue of abdominal segment of trunk" EXACT [OBOL:automatic] "portion of connective tissue of abdominal segment of trunk" EXACT [OBOL:automatic] "textus connectivus of abdominal segment of trunk" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0003586(trunk connective tissue) |
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part_of: | UBERON:0002417(abdominal segment of trunk) |
Children
is a: | UBERON:0003567 (abdomen connective tissue) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11679-122H5 (Renal Mesangial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003838 (abdominal segment connective tissue), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data