UBERON:0004237: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0004237
|name=blood vessel smooth muscle
|namespace=
|def="A portion of smooth muscle tissue that is part of a blood vessel [Obol]." [OBOL:automatic]
...") |
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|part_of=UBERON:0001981 | |part_of=UBERON:0001981 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:20, 15 June 2012
| Name: | blood vessel smooth muscle | ||
|---|---|---|---|
| Definition: | "A portion of smooth muscle tissue that is part of a blood vessel [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"blood vessel involuntary muscle" EXACT [OBOL:automatic] "blood vessel non-striated muscle" EXACT [OBOL:automatic] "blood vessel smooth muscle tissue" EXACT [OBOL:automatic] "involuntary muscle of blood vessel" EXACT [OBOL:automatic] "non-striated muscle of blood vessel" EXACT [OBOL:automatic] "smooth muscle of blood vessel" EXACT [OBOL:automatic] "smooth muscle tissue of blood vessel" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001135(smooth muscle tissue) |
|---|---|
| part_of: | UBERON:0001981(blood vessel) |
Children
| is a: | UBERON:0002111 (artery smooth muscle tissue),UBERON:0004178 (aorta smooth muscle tissue) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11283-116I5 (Smooth Muscle Cells - Aortic, donor1)
- 11297-117B1 (Canine Aortic Smooth Muscle cells, donor1)
- 11298-117B2 (Chicken Aortic Smooth Muscle cells, donor1)
- 11299-117B3 (Mouse Aortic Smooth Muscle cells, donor1)
- 11300-117B4 (Rat Aortic Smooth Muscle cells, donor1)
- 11325-117E2 (Canine hepatocytes, donor2)
- 11360-117I1 (Smooth Muscle Cells - Aortic, donor2)
- 11374-118A6 (Canine Aortic Smooth Muscle cells, donor2)
... further results Mouse (Mus musculus)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11283-116I5 (Smooth Muscle Cells - Aortic, donor1)
- 11297-117B1 (Canine Aortic Smooth Muscle cells, donor1)
- 11298-117B2 (Chicken Aortic Smooth Muscle cells, donor1)
- 11299-117B3 (Mouse Aortic Smooth Muscle cells, donor1)
- 11300-117B4 (Rat Aortic Smooth Muscle cells, donor1)
- 11325-117E2 (Canine hepatocytes, donor2)
- 11360-117I1 (Smooth Muscle Cells - Aortic, donor2)
- 11374-118A6 (Canine Aortic Smooth Muscle cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004237 (blood vessel smooth muscle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.58e-86 | FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_ebbd76f3f8f080733acaf8f2585eeaba | p@chr2:178190171..178190178, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_ebbd76f3f8f080733acaf8f2585eeaba | p@chr17:14827154..14827169, - |
| 1.58e-86 | FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_ebbd76f3f8f080733acaf8f2585eeaba | p@chr17:14802633..14802637, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_ebbd76f3f8f080733acaf8f2585eeaba | p@chr2:112043522..112043530, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_ebbd76f3f8f080733acaf8f2585eeaba | p@chr17:14827154..14827169, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_ebbd76f3f8f080733acaf8f2585eeaba | p@chr17:14802633..14802637, - |
| 1.58e-86 | FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_ebbd76f3f8f080733acaf8f2585eeaba | p@chr17:87574327..87574332, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_ebbd76f3f8f080733acaf8f2585eeaba | p@chrX:160839744..160839754, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_ebbd76f3f8f080733acaf8f2585eeaba | p@chr17:87574327..87574332, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_ebbd76f3f8f080733acaf8f2585eeaba | p@chr2:112043522..112043530, - |
| 1.58e-86 | FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_ebbd76f3f8f080733acaf8f2585eeaba | p@chr2:178190171..178190178, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_ebbd76f3f8f080733acaf8f2585eeaba | p@chrX:160839744..160839754, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_ebbd76f3f8f080733acaf8f2585eeaba | p@chr8:69228447..69228492, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_ebbd76f3f8f080733acaf8f2585eeaba | p5@Adamts2 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_ebbd76f3f8f080733acaf8f2585eeaba | p5@Adamts2 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_ebbd76f3f8f080733acaf8f2585eeaba | p@chr8:69228447..69228492, + |
| 5.79e-79 | FFCP PHASE2:Hg19::chr1:110429102..110429103,+#_6913bea811fdc29c6c6bf61c2e6bda3c | p@chr1:110429102..110429103, + |
| 5.79e-79 | FFCP PHASE1:Hg19::chr1:110429102..110429103,+#_6913bea811fdc29c6c6bf61c2e6bda3c | p@chr1:110429102..110429103, + |
| 1.33e-65 | FFCP PHASE2:Mm9::chr11:118164535..118164544,-#_f6663f11bcf7d9874050c2eeb34cba66 | p@chr11:118164535..118164544, - |
| 1.33e-65 | FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_f6663f11bcf7d9874050c2eeb34cba66 | p@chrX:160840025..160840037, + |
| 1.33e-65 | FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_f6663f11bcf7d9874050c2eeb34cba66 | p@chrX:160840025..160840037, + |
| 1.33e-65 | FFCP PHASE2:Mm9::chr6:128920492..128920498,-#_f6663f11bcf7d9874050c2eeb34cba66 | p@chr6:128920492..128920498, - |
| 1.33e-65 | FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_f6663f11bcf7d9874050c2eeb34cba66 | p@chrX:160840048..160840057, + |
| 1.33e-65 | FFCP PHASE1:Mm9::chr6:128920492..128920498,-#_f6663f11bcf7d9874050c2eeb34cba66 | p@chr6:128920492..128920498, - |
| 1.33e-65 | FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_f6663f11bcf7d9874050c2eeb34cba66 | p@chrX:160840048..160840057, + |
| 1.33e-65 | FFCP PHASE2:Mm9::chr17:71340031..71340044,-#_f6663f11bcf7d9874050c2eeb34cba66 | p5@Myl12b |
| 1.33e-65 | FFCP PHASE1:Mm9::chr11:118164535..118164544,-#_f6663f11bcf7d9874050c2eeb34cba66 | p@chr11:118164535..118164544, - |
| 1.33e-65 | FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_f6663f11bcf7d9874050c2eeb34cba66 | p6@Npy1r |
| 1.33e-65 | FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_f6663f11bcf7d9874050c2eeb34cba66 | p6@Npy1r |
| 1.33e-65 | FFCP PHASE1:Mm9::chr17:71340031..71340044,-#_f6663f11bcf7d9874050c2eeb34cba66 | p5@Myl12b |
| 2.21e-65 | FFCP PHASE2:Mm9::chr4:145000183..145000220,+#_a8891c3c0756558d1ef807620560067a | p1@ENSMUST00000150529 |
| 2.21e-65 | FFCP PHASE1:Mm9::chr4:145000183..145000220,+#_a8891c3c0756558d1ef807620560067a | p1@ENSMUST00000150529 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:14817013..14817022,-#_61ae0279b955b5714773204e03839c78 | p@chr17:14817013..14817022, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:69857155..69857159,+#_61ae0279b955b5714773204e03839c78 | p@chr8:69857155..69857159, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:69857155..69857159,+#_61ae0279b955b5714773204e03839c78 | p@chr8:69857155..69857159, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:24251697..24251707,+#_61ae0279b955b5714773204e03839c78 | p@chr14:24251697..24251707, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:96946110..96946113,+#_61ae0279b955b5714773204e03839c78 | p@chr10:96946110..96946113, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:96946110..96946113,+#_61ae0279b955b5714773204e03839c78 | p@chr10:96946110..96946113, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:87544959..87544962,+#_61ae0279b955b5714773204e03839c78 | p@chr17:87544959..87544962, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:87544959..87544962,+#_61ae0279b955b5714773204e03839c78 | p@chr17:87544959..87544962, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:78907550..78907557,+#_61ae0279b955b5714773204e03839c78 | p8@Vit |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:160839012..160839023,+#_61ae0279b955b5714773204e03839c78 | p@chrX:160839012..160839023, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:127573425..127573432,+#_61ae0279b955b5714773204e03839c78 | p12@Gpr39 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:127573425..127573432,+#_61ae0279b955b5714773204e03839c78 | p12@Gpr39 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:78907550..78907557,+#_61ae0279b955b5714773204e03839c78 | p8@Vit |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:160811352..160811356,-#_61ae0279b955b5714773204e03839c78 | p@chrX:160811352..160811356, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:33816181..33816195,-#_61ae0279b955b5714773204e03839c78 | p@chr10:33816181..33816195, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:160811352..160811356,-#_61ae0279b955b5714773204e03839c78 | p@chrX:160811352..160811356, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:160839012..160839023,+#_61ae0279b955b5714773204e03839c78 | p@chrX:160839012..160839023, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:14817013..14817022,-#_61ae0279b955b5714773204e03839c78 | p@chr17:14817013..14817022, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:33816181..33816195,-#_61ae0279b955b5714773204e03839c78 | p@chr10:33816181..33816195, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:24251697..24251707,+#_61ae0279b955b5714773204e03839c78 | p@chr14:24251697..24251707, + |
| 1.26e-55 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_0d192e03141d25bb1e5af60fbb7d2d8f | p@chr6:53359400..53359406, + |
| 1.26e-55 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_0d192e03141d25bb1e5af60fbb7d2d8f | p@chr6:53359400..53359406, + |
| 4.9e-53 | FFCP PHASE1:Mm9::chr10:67821185..67821217,-#_f87af9963e5bcafb5affe925c78608ea | p@chr10:67821185..67821217, - |
| 4.9e-53 | FFCP PHASE2:Mm9::chr10:67821185..67821217,-#_f87af9963e5bcafb5affe925c78608ea | p@chr10:67821185..67821217, - |
| 4.9e-53 | FFCP PHASE1:Mm9::chr17:29227828..29227839,-#_f87af9963e5bcafb5affe925c78608ea | p@chr17:29227828..29227839, - |
| 4.9e-53 | FFCP PHASE2:Mm9::chr2:113589030..113589077,-#_f87af9963e5bcafb5affe925c78608ea | p@chr2:113589030..113589077, - |
| 4.9e-53 | FFCP PHASE1:Mm9::chr14:24251717..24251731,+#_f87af9963e5bcafb5affe925c78608ea | p@chr14:24251717..24251731, + |
| 4.9e-53 | FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_f87af9963e5bcafb5affe925c78608ea | p@chr10:67598037..67598049, - |
| 4.9e-53 | FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_f87af9963e5bcafb5affe925c78608ea | p5@Npy1r |
| 4.9e-53 | FFCP PHASE2:Mm9::chr14:24251717..24251731,+#_f87af9963e5bcafb5affe925c78608ea | p@chr14:24251717..24251731, + |
| 4.9e-53 | FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_f87af9963e5bcafb5affe925c78608ea | p5@Npy1r |
| 4.9e-53 | FFCP PHASE2:Mm9::chr17:29227828..29227839,-#_f87af9963e5bcafb5affe925c78608ea | p@chr17:29227828..29227839, - |
| 4.9e-53 | FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_f87af9963e5bcafb5affe925c78608ea | p@chr7:91081998..91082010, - |
| 4.9e-53 | FFCP PHASE2:Mm9::chr13:113253807..113253846,+#_f87af9963e5bcafb5affe925c78608ea | p4@Il6st |
| 4.9e-53 | FFCP PHASE1:Mm9::chr13:113253807..113253846,+#_f87af9963e5bcafb5affe925c78608ea | p4@Il6st |
| 4.9e-53 | FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_f87af9963e5bcafb5affe925c78608ea | p@chr10:67598037..67598049, - |
| 4.9e-53 | FFCP PHASE1:Mm9::chr2:113589030..113589077,-#_f87af9963e5bcafb5affe925c78608ea | p@chr2:113589030..113589077, - |
| 4.9e-53 | FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_f87af9963e5bcafb5affe925c78608ea | p@chr7:91081998..91082010, - |
| 7.35e-53 | FFCP PHASE2:Mm9::chr4:58219542..58219545,-#_12325f52df4c39873dbdaa5915c947b0 | p11@Svep1 |
| 7.35e-53 | FFCP PHASE1:Mm9::chr4:58219542..58219545,-#_12325f52df4c39873dbdaa5915c947b0 | p11@Svep1 |
| 1.1e-52 | FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_c82b3bf0d06960d13a9ff51e88072891 | p@chrX:160838787..160838800, + |
| 1.1e-52 | FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_c82b3bf0d06960d13a9ff51e88072891 | p@chrX:160838787..160838800, + |
| 1.65e-52 | FFCP PHASE2:Mm9::chr1:137662814..137662817,+#_f046a0ab772808dc451c58f3d9880583 | p5@Phlda3 |
| 1.65e-52 | FFCP PHASE1:Mm9::chr1:137662814..137662817,+#_f046a0ab772808dc451c58f3d9880583 | p5@Phlda3 |
| 5.51e-52 | FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_db94146ac04e1edfdeb75772de1151a7 | p@chr2:65009852..65009866, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_db94146ac04e1edfdeb75772de1151a7 | p@chr2:65009852..65009866, - |
| 1.18e-44 | FFCP PHASE1:Mm9::chr13:119579287..119579292,+#_6a7cd2d917d7300a9a4ab9b995c15acd | p@chr13:119579287..119579292, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr11:86417559..86417568,+#_6a7cd2d917d7300a9a4ab9b995c15acd | p@chr11:86417559..86417568, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr1:127573864..127573879,+#_6a7cd2d917d7300a9a4ab9b995c15acd | p10@Gpr39 |
| 1.18e-44 | FFCP PHASE2:Mm9::chr1:127573864..127573879,+#_6a7cd2d917d7300a9a4ab9b995c15acd | p10@Gpr39 |
| 1.18e-44 | FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_6a7cd2d917d7300a9a4ab9b995c15acd | p@chr17:14813242..14813246, - |
| 1.18e-44 | FFCP PHASE1:Mm9::chr11:86417559..86417568,+#_6a7cd2d917d7300a9a4ab9b995c15acd | p@chr11:86417559..86417568, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr2:178190136..178190151,+#_6a7cd2d917d7300a9a4ab9b995c15acd | p@chr2:178190136..178190151, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_6a7cd2d917d7300a9a4ab9b995c15acd | p@chr17:14813242..14813246, - |
| 1.18e-44 | FFCP PHASE2:Mm9::chr13:119579287..119579292,+#_6a7cd2d917d7300a9a4ab9b995c15acd | p@chr13:119579287..119579292, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_6a7cd2d917d7300a9a4ab9b995c15acd | p@chrX:160838683..160838694, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr2:178190136..178190151,+#_6a7cd2d917d7300a9a4ab9b995c15acd | p@chr2:178190136..178190151, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_6a7cd2d917d7300a9a4ab9b995c15acd | p@chrX:160838683..160838694, + |
| 1.66e-44 | FFCP PHASE2:Mm9::chrX:160839663..160839673,+#_5ade0400a51e95ec22e8d534ef485173 | p@chrX:160839663..160839673, + |
| 1.66e-44 | FFCP PHASE1:Mm9::chrX:160839663..160839673,+#_5ade0400a51e95ec22e8d534ef485173 | p@chrX:160839663..160839673, + |
| 1.66e-44 | FFCP PHASE2:Mm9::chr13:119503185..119503195,+#_5ade0400a51e95ec22e8d534ef485173 | p9@Fgf10 |
| 1.66e-44 | FFCP PHASE1:Mm9::chr13:119503185..119503195,+#_5ade0400a51e95ec22e8d534ef485173 | p9@Fgf10 |
| 2.33e-44 | FFCP PHASE2:Mm9::chr17:75790300..75790304,+#_708dac618a6f0dfaf92c850686aacd4d | p@chr17:75790300..75790304, + |
| 2.33e-44 | FFCP PHASE1:Mm9::chr17:75790300..75790304,+#_708dac618a6f0dfaf92c850686aacd4d | p@chr17:75790300..75790304, + |
| 3.27e-44 | FFCP PHASE1:Mm9::chr1:127573708..127573719,+#_6da712fbf74624270a9f49037c04ec8c | p9@Gpr39 |
| 3.27e-44 | FFCP PHASE2:Mm9::chr1:127573708..127573719,+#_6da712fbf74624270a9f49037c04ec8c | p9@Gpr39 |
| 4.58e-44 | FFCP PHASE1:Mm9::chr17:14813991..14813999,+#_c3e07cf24b4518ad4e9f6c20a9041852 | p@chr17:14813991..14813999, + |
| 4.58e-44 | FFCP PHASE2:Mm9::chr17:14813991..14813999,+#_c3e07cf24b4518ad4e9f6c20a9041852 | p@chr17:14813991..14813999, + |
