UBERON:0005297: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0005297
|name=testis sex cord
|namespace=
|def="The testis cords are precursors to the rete testis. They play several different roles in the developmen...") |
No edit summary |
||
| Line 21: | Line 21: | ||
|part_of=UBERON:0000473 | |part_of=UBERON:0000473 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 17:22, 15 June 2012
| Name: | testis sex cord | ||
|---|---|---|---|
| Definition: | "The testis cords are precursors to the rete testis. They play several different roles in the development of the male genitals[WP]." [Wikipedia:Testis_cords] | ||
| Xrefs: |
| ||
| Synonyms: |
"primary sex cord" RELATED [] "testis cord" EXACT [MP:0006424] "testis primary sex cords" EXACT [EHDAA2:0002011] "testis primitive sex cord" RELATED [] | ||
| Comments: | check primary vs testis |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004910(epithelium of male gonad),UBERON:0005295(sex cord) |
|---|---|
| develops_from: | UBERON:0010141(primitive sex cord of indifferent gonad) |
| part_of: | UBERON:0000473(testis) |
Children
| develops from: | UBERON:0001343 (seminiferous tubule of testis) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005297 (testis sex cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr11:27721743..27721753,-#_87e1e8b2ba9c67f5b5f3acbc2a9b5229 | p26@BDNF |
| 5.42e-195 | FFCP PHASE2:Hg19::chr11:27721743..27721753,-#_87e1e8b2ba9c67f5b5f3acbc2a9b5229 | p26@BDNF |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:227505905..227505906,-#_2c848ec2f811fd3e84fc74923eb39228 | p43@CDC42BPA |
| 9.37e-99 | FFCP PHASE1:Hg19::chr3:158450428..158450431,-#_2c848ec2f811fd3e84fc74923eb39228 | p9@RARRES1 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr3:158450428..158450431,-#_2c848ec2f811fd3e84fc74923eb39228 | p9@RARRES1 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:227505905..227505906,-#_2c848ec2f811fd3e84fc74923eb39228 | p43@CDC42BPA |
| 2.55e-98 | FFCP PHASE2:Hg19::chr8:69832864..69832865,+#_02e89e2ae345893bfe1826e7a1121386 | p@chr8:69832864..69832865, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:9519086..9519101,+#_02e89e2ae345893bfe1826e7a1121386 | p@chr2:9519086..9519101, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr7:89874193..89874199,+#_02e89e2ae345893bfe1826e7a1121386 | p7@C7orf63 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr7:18206831..18206833,+#_02e89e2ae345893bfe1826e7a1121386 | p@chr7:18206831..18206833, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr19:40320572..40320586,-#_02e89e2ae345893bfe1826e7a1121386 | p@chr19:40320572..40320586, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:9519086..9519101,+#_02e89e2ae345893bfe1826e7a1121386 | p@chr2:9519086..9519101, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr3:193356854..193356864,+#_02e89e2ae345893bfe1826e7a1121386 | p@chr3:193356854..193356864, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr3:170430340..170430344,+#_02e89e2ae345893bfe1826e7a1121386 | p@chr3:170430340..170430344, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr8:47529304..47529311,-#_02e89e2ae345893bfe1826e7a1121386 | p@chr8:47529304..47529311, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr7:89874193..89874199,+#_02e89e2ae345893bfe1826e7a1121386 | p7@C7orf63 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr8:69832864..69832865,+#_02e89e2ae345893bfe1826e7a1121386 | p@chr8:69832864..69832865, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr8:47529304..47529311,-#_02e89e2ae345893bfe1826e7a1121386 | p@chr8:47529304..47529311, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr13:53030077..53030083,-#_02e89e2ae345893bfe1826e7a1121386 | p@chr13:53030077..53030083, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr19:54600897..54600899,+#_02e89e2ae345893bfe1826e7a1121386 | p@chr19:54600897..54600899, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr19:40320572..40320586,-#_02e89e2ae345893bfe1826e7a1121386 | p@chr19:40320572..40320586, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr13:53030077..53030083,-#_02e89e2ae345893bfe1826e7a1121386 | p@chr13:53030077..53030083, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr7:18206831..18206833,+#_02e89e2ae345893bfe1826e7a1121386 | p@chr7:18206831..18206833, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:193356854..193356864,+#_02e89e2ae345893bfe1826e7a1121386 | p@chr3:193356854..193356864, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr19:54600897..54600899,+#_02e89e2ae345893bfe1826e7a1121386 | p@chr19:54600897..54600899, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:170430340..170430344,+#_02e89e2ae345893bfe1826e7a1121386 | p@chr3:170430340..170430344, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr2:19551668..19551679,-#_b7c4e076d66128cecd58faeaa2eeb009 | p@chr2:19551668..19551679, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr2:19551668..19551679,-#_b7c4e076d66128cecd58faeaa2eeb009 | p@chr2:19551668..19551679, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:72803155..72803204,-#_1ce7dbe8b0ea85b0c229a490a9248f11 | p@chr2:72803155..72803204, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:197889533..197889548,+#_1ce7dbe8b0ea85b0c229a490a9248f11 | p@chr1:197889533..197889548, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:72803155..72803204,-#_1ce7dbe8b0ea85b0c229a490a9248f11 | p@chr2:72803155..72803204, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr12:15815732..15815744,-#_1ce7dbe8b0ea85b0c229a490a9248f11 | p21@EPS8 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr12:15815732..15815744,-#_1ce7dbe8b0ea85b0c229a490a9248f11 | p21@EPS8 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:98445585..98445594,-#_1ce7dbe8b0ea85b0c229a490a9248f11 | p22@TMEM130 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr3:112931461..112931474,-#_1ce7dbe8b0ea85b0c229a490a9248f11 | p@chr3:112931461..112931474, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr3:112931461..112931474,-#_1ce7dbe8b0ea85b0c229a490a9248f11 | p@chr3:112931461..112931474, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:197889533..197889548,+#_1ce7dbe8b0ea85b0c229a490a9248f11 | p@chr1:197889533..197889548, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:98445585..98445594,-#_1ce7dbe8b0ea85b0c229a490a9248f11 | p22@TMEM130 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr10:1034666..1034675,+#_533809c968bb2af477e5ef3f4a98db2f | p4@GTPBP4 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr8:141728731..141728740,-#_533809c968bb2af477e5ef3f4a98db2f | p38@PTK2 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr5:90830481..90830492,+#_533809c968bb2af477e5ef3f4a98db2f | p@chr5:90830481..90830492, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_533809c968bb2af477e5ef3f4a98db2f | p@chr5:75912402..75912418, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr3:99984127..99984138,+#_533809c968bb2af477e5ef3f4a98db2f | p@chr3:99984127..99984138, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr10:1034666..1034675,+#_533809c968bb2af477e5ef3f4a98db2f | p4@GTPBP4 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr5:90830481..90830492,+#_533809c968bb2af477e5ef3f4a98db2f | p@chr5:90830481..90830492, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr3:170916991..170916995,-#_533809c968bb2af477e5ef3f4a98db2f | p@chr3:170916991..170916995, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr21:48080873..48080878,+#_533809c968bb2af477e5ef3f4a98db2f | p@chr21:48080873..48080878, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr21:48080873..48080878,+#_533809c968bb2af477e5ef3f4a98db2f | p@chr21:48080873..48080878, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr8:141728731..141728740,-#_533809c968bb2af477e5ef3f4a98db2f | p38@PTK2 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_533809c968bb2af477e5ef3f4a98db2f | p@chr5:75912402..75912418, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr3:99984127..99984138,+#_533809c968bb2af477e5ef3f4a98db2f | p@chr3:99984127..99984138, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr3:170916991..170916995,-#_533809c968bb2af477e5ef3f4a98db2f | p@chr3:170916991..170916995, - |
| 6.41e-58 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_30416e606338bad67b34b7a42ee0f4a6 | p4@Spink12 |
| 6.41e-58 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_30416e606338bad67b34b7a42ee0f4a6 | p4@Spink12 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr11:114173606..114173612,+#_9fa0e3e54a492b1916e1ab0b1476f91f | p@chr11:114173606..114173612, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr11:114173606..114173612,+#_9fa0e3e54a492b1916e1ab0b1476f91f | p@chr11:114173606..114173612, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr2:177009137..177009140,+#_9fa0e3e54a492b1916e1ab0b1476f91f | p@chr2:177009137..177009140, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr6:134210772..134210782,+#_9fa0e3e54a492b1916e1ab0b1476f91f | p8@TCF21 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr6:134210772..134210782,+#_9fa0e3e54a492b1916e1ab0b1476f91f | p8@TCF21 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr2:177009137..177009140,+#_9fa0e3e54a492b1916e1ab0b1476f91f | p@chr2:177009137..177009140, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr15:39288691..39288698,+#_0b16ad061bde10557ede4f8de44a078e | p@chr15:39288691..39288698, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr15:39288691..39288698,+#_0b16ad061bde10557ede4f8de44a078e | p@chr15:39288691..39288698, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr3:46477553..46477563,-#_0b16ad061bde10557ede4f8de44a078e | p@chr3:46477553..46477563, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr5:144875561..144875565,+#_0b16ad061bde10557ede4f8de44a078e | p@chr5:144875561..144875565, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr7:137564648..137564658,-#_0b16ad061bde10557ede4f8de44a078e | p32@CREB3L2 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr19:54024454..54024463,+#_0b16ad061bde10557ede4f8de44a078e | p31@ZNF331 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr5:144875561..144875565,+#_0b16ad061bde10557ede4f8de44a078e | p@chr5:144875561..144875565, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr7:137564648..137564658,-#_0b16ad061bde10557ede4f8de44a078e | p32@CREB3L2 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr21:17214724..17214740,+#_0b16ad061bde10557ede4f8de44a078e | p11@USP25 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr2:55459485..55459491,-#_0b16ad061bde10557ede4f8de44a078e | p6@C2orf63 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr3:46477553..46477563,-#_0b16ad061bde10557ede4f8de44a078e | p@chr3:46477553..46477563, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr19:54024454..54024463,+#_0b16ad061bde10557ede4f8de44a078e | p31@ZNF331 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr21:17214724..17214740,+#_0b16ad061bde10557ede4f8de44a078e | p11@USP25 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr2:55459485..55459491,-#_0b16ad061bde10557ede4f8de44a078e | p6@C2orf63 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr4:103969123..103969127,-#_7a0390d7aaab3e96de7b11f3b157f105 | p@chr4:103969123..103969127, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr12:5198350..5198359,+#_7a0390d7aaab3e96de7b11f3b157f105 | p@chr12:5198350..5198359, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr12:5198350..5198359,+#_7a0390d7aaab3e96de7b11f3b157f105 | p@chr12:5198350..5198359, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr14:64804787..64804796,-#_7a0390d7aaab3e96de7b11f3b157f105 | p10@ESR2 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr15:39420650..39420666,+#_7a0390d7aaab3e96de7b11f3b157f105 | p@chr15:39420650..39420666, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr15:39420650..39420666,+#_7a0390d7aaab3e96de7b11f3b157f105 | p@chr15:39420650..39420666, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr14:64804787..64804796,-#_7a0390d7aaab3e96de7b11f3b157f105 | p10@ESR2 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:829412..829430,+#_7a0390d7aaab3e96de7b11f3b157f105 | p11@EFCAB4A |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:829412..829430,+#_7a0390d7aaab3e96de7b11f3b157f105 | p11@EFCAB4A |
| 3.99e-50 | FFCP PHASE1:Hg19::chr4:103969123..103969127,-#_7a0390d7aaab3e96de7b11f3b157f105 | p@chr4:103969123..103969127, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr16:1203194..1203207,+#_14be21abe318274a8184bce751aa1a15 | p3@CACNA1H |
| 6.58e-50 | FFCP PHASE1:Hg19::chr17:58165788..58165794,-#_14be21abe318274a8184bce751aa1a15 | p1@LOC645638 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr16:1203194..1203207,+#_14be21abe318274a8184bce751aa1a15 | p3@CACNA1H |
| 6.58e-50 | FFCP PHASE1:Hg19::chr7:92462738..92462749,-#_14be21abe318274a8184bce751aa1a15 | p51@CDK6 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr14:50697797..50697820,-#_14be21abe318274a8184bce751aa1a15 | p13@SOS2 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr14:50697797..50697820,-#_14be21abe318274a8184bce751aa1a15 | p13@SOS2 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr17:58165788..58165794,-#_14be21abe318274a8184bce751aa1a15 | p1@LOC645638 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr7:92462738..92462749,-#_14be21abe318274a8184bce751aa1a15 | p51@CDK6 |
| 4.52e-44 | FFCP PHASE1:Mm9::chr17:75581992..75582009,+#_0ff38299243207f8aca52774a39d2607 | p@chr17:75581992..75582009, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr17:75581992..75582009,+#_0ff38299243207f8aca52774a39d2607 | p@chr17:75581992..75582009, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr3:194214959..194214968,-#_abc4f84780d2988fed287c5f6879aed0 | p@chr3:194214959..194214968, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr3:194214959..194214968,-#_abc4f84780d2988fed287c5f6879aed0 | p@chr3:194214959..194214968, - |
| 9.91e-41 | FFCP PHASE2:Hg19::chr11:94822746..94822757,+#_c059a5f243e8017531074f815ec54d6e | p8@ENDOD1 |
| 9.91e-41 | FFCP PHASE1:Hg19::chr11:94822746..94822757,+#_c059a5f243e8017531074f815ec54d6e | p8@ENDOD1 |
| 9.91e-41 | FFCP PHASE2:Hg19::chr13:49549473..49549480,+#_c059a5f243e8017531074f815ec54d6e | p@chr13:49549473..49549480, + |
| 9.91e-41 | FFCP PHASE1:Hg19::chr9:114135497..114135526,-#_c059a5f243e8017531074f815ec54d6e | p@chr9:114135497..114135526, - |
