Template:UO: Difference between revisions
From FANTOM5_SSTAR
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<br>link to ontology dataset | <br>link to ontology dataset | ||
<br>[ | <br>[//fantom.gsc.riken.jp/5/datafiles/phase1.1/extra/Ontology/ff-phase1-prerelease-20130717.obo data] | ||
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link to source dataset <br> | link to source dataset <br> | ||
human : [ | human : [//fantom.gsc.riken.jp/5/datafiles/phase1.1/extra/Sample_ontology_enrichment_of_CAGE_peaks/hg19exp_cell_types_general_term_excluded.txt.gz data] <br> | ||
mouse : [ | mouse : [//fantom.gsc.riken.jp/5/datafiles/phase1.1/extra/Sample_ontology_enrichment_of_CAGE_peaks/mm9exp_cell_types_general_term_excluded.txt.gz data] | ||
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Revision as of 16:27, 16 January 2020
Name: | {{{name}}} | |
---|---|---|
Namespace: | {{{namespace}}} | |
Definition: | {{{def}}} | |
Xrefs: |
| |
Synonyms: | {{{synonym}}} | |
Comments: | {{{comment}}} | |
Alt_id: | {{{alt_id}}} | |
Subset: | {{{subset}}} | |
Created by: | {{{created_by}}} | |
Creation date: | {{{obo_creation_date}}} | |
Has quality: | {{{has_quality}}} |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
NA
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with {{{id}}} ({{{name}}}), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results for this cluster
"{{{obo_creation_date}}}" contains an extrinsic dash or other characters that are invalid for a date interpretation.