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FFCP PHASE1:Mm9::chr15:91503616..91503699,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr15:91503616..91503699,+
|short_description=p1@Lrrk2
|description=CAGE_peak_1_at_Lrrk2_5end
|association_with_transcript=0bp_to_NM_025730,uc007xhz.1_5end
|EntrezGene=66725
|EntrezGene=66725
|HGNC=
|HGNC=
|UniProt=Q5S006,Q9CQG8
|UniProt=Q5S006,Q9CQG8
|association_with_transcript=0bp_to_NM_025730,uc007xhz.1_5end
|description=CAGE_peak_1_at_Lrrk2_5end
|id=chr15:91503616..91503699,+
|ontology_enrichment_disease=
|phase1_expression=3.52327463630547,0,0,0.30246421130683,0,0,0,0.387369970324729,0.281577444303333,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,20.6528052325711,26.5242600280672,2.79824751251259,131.705454037064,146.163986223718,143.868091959532,21.1757792476164,0.397163804803541,0,8.31960598525715,5.96464130774642,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,217.636447983192,118.762972367618,170.145216791484,255.29246580546,233.601555855788,199.544755095804,18.8845226963366,19.8698785190249,21.6585167550784,4.69434806608824,1.96222640742402,2.63623419281366,4.86074747685709,2.65974201088189,1.43752564364972,139.427345633979,0.725362142011344,0.672187598284928,7.46052364504246,13.1805382371828,9.7977697532714,0.404632921719196,0,0.633831403506179,3.38844532069132,0,1.3498495759221,0.988866362566974,2.1314403448383,1.19840044207362,1.92109152660777,0.414758449233911,0,0,1.42825492201902,1.10434270475807,0.244981598429908,0.479227355091182,0,3.30347642998166,6.76742891851495,7.98753972932466,0.659431438650969,0.548925861614458,0,3.35019598801657,3.93933827022176,3.97275444219706,1.76777151284201,2.13557521198654,1.1183966749518,7.26971455998567,20.2531781086185,33.6242806893946,11.185510400758,0,1.07940638327563,1.29955283489534,0.896053774194671,11.0951091904084,10.9075406449957,8.57293815189467,14.4869225549239,2.95771181531029,19.2489716121477,25.4805239706646,21.3320010945999,1.94841936910093,0.760079596425296,3.53867111510348,11.3042040921869,119.111426477699,12.7660239595749,2.94925055502431,7.00270600117925,11.0695438682908,11.6056433225519,15.6392980490487,18.7243221081216,1.48316980640624,9.25435884287435,23.8844849026466,6.79420769779119,12.1462835153216,8.727754556434,1.86391761218122,22.8369021669007,14.2423760633149,3.0654846625031,3.71426885968353,4.79922184794726,3.17675567682662,6.74057877321702,28.8225379775735,0.628271760564322,29.8977830730716,22.7586757023994,7.06479351502504,11.5191296778108,6.31404055871961,15.6752782968717,5.55990068554084,114.059485890469,2.34216797332867,2.29902104433473,1.62055916824814,4.21973489940002,4.76255494059295,4.86832137082429,3.27956035959051,29.7508876349868,0.862271971731369,3.21480336285293,3.51902248327898,3.28793598641362,4.44875598760957,7.66154766348766,8.43706759272568,3.98068533636986,2.80885274925294,2.05878325691772,3.40996199274711,7.66365358381357,4.22146907965973,4.32148947506436,5.20838418287463,6.29645541591692,6.94202007993202,6.51095045301142,5.90201483079162,8.29033930806903,5.75959474697182,11.8200574136949,13.7816976227955,15.9357986293612,9.66020507280623,13.2864354572768,10.7247873767705,1.74937841044784,0.991256348951394,2.3800550999719,1.49301775374664,2.09013004674395,2.57734922644187,3.83198696784351,2.00140239460383,3.42406127002606,5.69434873853414,1.97638745668813,6.28338022000674,3.97912944082302,7.40863531052657,2.69645822596266,4.53889904736858,5.17767310461355,1.13800740571849,3.99869794134051,3.38123207019241,9.77526373657508,10.4734343070518,10.3801013437671,25.2946148497029,44.2830443938806,54.6355572887984,38.6233123075236,2.37162101669719,1.50160595144485,0.589676985339609,0.674586337154561,1.21716072833102,3.13530307678142,5.60176873919124,8.91858026097513,5.0261920300261,4.11842119782122,4.31304619582064,8.18710084870708,7.17686648163489,3.78868316920668,1.97337154874103,3.37710464954357,70.9452250239762,3.60033682363921,5.70377417547091,7.29903868833309,12.6732734075791,23.618382299296,42.1337244368244,41.3683333458534,36.0984480003177,33.6626328266138,32.0504085001549,58.8269299829499,52.3235495053664,69.4315481191256,3.01582567878545,3.26343410291226,3.93411418415229,3.03530420935206,10.4357883492065,8.32202974804643,5.57378814280696,9.84636616097055,8.51872192423893,3.12350995437311,4.30846795465598,4.30143836314594,6.46116154838943,4.24614796183249,8.50102473517278,9.64444331107329,7.11518000303742,6.74774764485795,13.4843080947855,3.02711526234334,4.72372182125371,7.25868541079156,2.65490276679926,0.971122544619926,0.302323556964751,1.50884063804718,0.885905678642318,3.3817866273832,4.39328098385976,3.63533729477506,4.9909632973861,4.42451461110142,2.10837217149998,5.15677716240934,10.8940673841212,2.52085531643834,1.81102157295856,1.50035924522115,3.90148514013002,1.96205699362278,4.44282355625727,2.74018454203139,4.22409074514679,2.1183207086382,2.8668691747145,8.73897140589844,7.26589920131575,5.60910201831849,5.96861720015682,5.0883678920969,3.20628920292836,11.3109434226411,36.0537558483469,8.66824845445534,16.2971184085346,9.41842285023455,21.0509110690379,27.9109371311958,7.47905091972963,8.53703859174314,9.81219814011409,0.954670618015114,2.68885594543965,5.69294507955176,5.29226170026826,5.85447228840512,9.17122767733946,9.17077555416781,9.17453358551229,9.42321391142507,4.79575401179634,3.72803587852155,5.07323644815771,3.43888055901151,3.80554528051325,6.02798683866548,4.77891346867605,5.57555214119568,8.44972118249428,4.6873578543822,5.03324853243412,9.18019659138823,7.4887801627045,5.056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|phase1_expression=3.52327463630547,0,0,0.30246421130683,0,0,0,0.387369970324729,0.281577444303333,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,20.6528052325711,26.5242600280672,2.79824751251259,131.705454037064,146.163986223718,143.868091959532,21.1757792476164,0.397163804803541,0,8.31960598525715,5.96464130774642,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,217.636447983192,118.762972367618,170.145216791484,255.29246580546,233.601555855788,199.544755095804,18.8845226963366,19.8698785190249,21.6585167550784,4.69434806608824,1.96222640742402,2.63623419281366,4.86074747685709,2.65974201088189,1.43752564364972,139.427345633979,0.725362142011344,0.672187598284928,7.46052364504246,13.1805382371828,9.7977697532714,0.404632921719196,0,0.633831403506179,3.38844532069132,0,1.3498495759221,0.988866362566974,2.1314403448383,1.19840044207362,1.92109152660777,0.414758449233911,0,0,1.42825492201902,1.10434270475807,0.244981598429908,0.479227355091182,0,3.30347642998166,6.76742891851495,7.98753972932466,0.659431438650969,0.548925861614458,0,3.35019598801657,3.93933827022176,3.97275444219706,1.76777151284201,2.13557521198654,1.1183966749518,7.26971455998567,20.2531781086185,33.6242806893946,11.185510400758,0,1.07940638327563,1.29955283489534,0.896053774194671,11.0951091904084,10.9075406449957,8.57293815189467,14.4869225549239,2.95771181531029,19.2489716121477,25.4805239706646,21.3320010945999,1.94841936910093,0.760079596425296,3.53867111510348,11.3042040921869,119.111426477699,12.7660239595749,2.94925055502431,7.00270600117925,11.0695438682908,11.6056433225519,15.6392980490487,18.7243221081216,1.48316980640624,9.25435884287435,23.8844849026466,6.79420769779119,12.1462835153216,8.727754556434,1.86391761218122,22.8369021669007,14.2423760633149,3.0654846625031,3.71426885968353,4.79922184794726,3.17675567682662,6.74057877321702,28.8225379775735,0.628271760564322,29.8977830730716,22.7586757023994,7.06479351502504,11.5191296778108,6.31404055871961,15.6752782968717,5.55990068554084,114.059485890469,2.34216797332867,2.29902104433473,1.62055916824814,4.21973489940002,4.76255494059295,4.86832137082429,3.27956035959051,29.7508876349868,0.862271971731369,3.21480336285293,3.51902248327898,3.28793598641362,4.44875598760957,7.66154766348766,8.43706759272568,3.98068533636986,2.80885274925294,2.05878325691772,3.40996199274711,7.66365358381357,4.22146907965973,4.32148947506436,5.20838418287463,6.29645541591692,6.94202007993202,6.51095045301142,5.90201483079162,8.29033930806903,5.75959474697182,11.8200574136949,13.7816976227955,15.9357986293612,9.66020507280623,13.2864354572768,10.7247873767705,1.74937841044784,0.991256348951394,2.3800550999719,1.49301775374664,2.09013004674395,2.57734922644187,3.83198696784351,2.00140239460383,3.42406127002606,5.69434873853414,1.97638745668813,6.28338022000674,3.97912944082302,7.40863531052657,2.69645822596266,4.53889904736858,5.17767310461355,1.13800740571849,3.99869794134051,3.38123207019241,9.77526373657508,10.4734343070518,10.3801013437671,25.2946148497029,44.2830443938806,54.6355572887984,38.6233123075236,2.37162101669719,1.50160595144485,0.589676985339609,0.674586337154561,1.21716072833102,3.13530307678142,5.60176873919124,8.91858026097513,5.0261920300261,4.11842119782122,4.31304619582064,8.18710084870708,7.17686648163489,3.78868316920668,1.97337154874103,3.37710464954357,70.9452250239762,3.60033682363921,5.70377417547091,7.29903868833309,12.6732734075791,23.618382299296,42.1337244368244,41.3683333458534,36.0984480003177,33.6626328266138,32.0504085001549,58.8269299829499,52.3235495053664,69.4315481191256,3.01582567878545,3.26343410291226,3.93411418415229,3.03530420935206,10.4357883492065,8.32202974804643,5.57378814280696,9.84636616097055,8.51872192423893,3.12350995437311,4.30846795465598,4.30143836314594,6.46116154838943,4.24614796183249,8.50102473517278,9.64444331107329,7.11518000303742,6.74774764485795,13.4843080947855,3.02711526234334,4.72372182125371,7.25868541079156,2.65490276679926,0.971122544619926,0.302323556964751,1.50884063804718,0.885905678642318,3.3817866273832,4.39328098385976,3.63533729477506,4.9909632973861,4.42451461110142,2.10837217149998,5.15677716240934,10.8940673841212,2.52085531643834,1.81102157295856,1.50035924522115,3.90148514013002,1.96205699362278,4.44282355625727,2.74018454203139,4.22409074514679,2.1183207086382,2.8668691747145,8.73897140589844,7.26589920131575,5.60910201831849,5.96861720015682,5.0883678920969,3.20628920292836,11.3109434226411,36.0537558483469,8.66824845445534,16.2971184085346,9.41842285023455,21.0509110690379,27.9109371311958,7.47905091972963,8.53703859174314,9.81219814011409,0.954670618015114,2.68885594543965,5.69294507955176,5.29226170026826,5.85447228840512,9.17122767733946,9.17077555416781,9.17453358551229,9.42321391142507,4.79575401179634,3.72803587852155,5.07323644815771,3.43888055901151,3.80554528051325,6.02798683866548,4.77891346867605,5.57555214119568,8.44972118249428,4.6873578543822,5.03324853243412,9.18019659138823,7.4887801627045,5.056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|short_description=p1@Lrrk2
}}
}}

Revision as of 23:45, 17 April 2012

Short description:p1@Lrrk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrrk2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_025730, uc007xhz.1_5end
EntrezGene:Lrrk2
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Lrrk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A120.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A326.52
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2131.71
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4146.16
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6143.87
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8217.64
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1118.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3170.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9255.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2233.60
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4199.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D818.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B321.66
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2139.43
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.18
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D97.27
Mouse Schwann, donor2.CNhs12573.11746-123F920.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G333.62
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I814.49
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.30
accessory axillary lymph node, adult.CNhs10475.1063-29H9119.11
adrenal gland, adult.CNhs10508.49-24D712.77
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D67.00
adrenal gland, embryo E17.CNhs11043.1263-45I111.07
adrenal gland, embryo E18.CNhs11026.1262-18F511.61
adrenal gland, neonate N00.CNhs11191.1311-23C115.64
adrenal gland, neonate N25.CNhs11223.1377-27I318.72
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H19.25
bone (os femoris), adult.CNhs10483.56-12G223.88
bone (os femoris), neonate N02.CNhs11227.1985-43F56.79
bone (os femoris), neonate N16.CNhs11225.1525-43A612.15
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B222.84
cerebellum, neonate N30.CNhs11135.1395-42I214.24
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.18
corpora quadrigemina, adult.CNhs10501.16-22A46.74
corpus striatum, adult.CNhs10487.19-21D828.82
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D529.90
cortex, neonate N30.CNhs11107.1392-42F222.76
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B211.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.68
epididymis, adult.CNhs10490.58-23B25.56
eyeball, adult.CNhs10484.31-12G4114.06
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C64.76
eyeball, neonate N01.CNhs11140.1532-43E74.87
eyeball, neonate N02.CNhs11205.1551-44G83.28
eyeball, neonate N16.CNhs11188.777-19A229.75
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B58.44
gonad, embryo E13.CNhs11044.1564-45I63.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E97.66
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I94.32
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C86.30
heart, embryo E16.CNhs11021.457-17C66.94
heart, embryo E17.CNhs11025.479-18E56.51
heart, embryo E18.CNhs11030.1283-20G35.90
heart, neonate N00.CNhs11213.639-21E38.29
heart, neonate N03.CNhs11221.1349-25I25.76
heart, neonate N10.CNhs11118.749-24G111.82
heart, neonate N16.CNhs11209.782-15G113.78
heart, neonate N20.CNhs11127.821-26I615.94
heart, neonate N25.CNhs11196.1351-25D39.66
heart, neonate N30.CNhs11202.1390-42D213.29
hippocampus, adult.CNhs10478.13-16E810.72
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B86.28
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A57.41
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G15.18
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F84.00
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I29.78
kidney, embryo E18.CNhs11001.1288-20C710.47
kidney, neonate N00.CNhs11214.646-21G710.38
kidney, neonate N10.CNhs11206.758-6D525.29
kidney, neonate N20.CNhs11113.832-19I144.28
kidney, neonate N25.CNhs11122.1353-25F354.64
kidney, neonate N30.CNhs11203.1385-42H138.62
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G48.92
liver, neonate N00.CNhs11117.641-24F45.03
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H28.19
liver, neonate N10.CNhs11115.751-24B97.18
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B170.95
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F85.70
lung, embryo E15.CNhs11020.432-17C57.30
lung, embryo E16.CNhs10998.458-17B612.67
lung, embryo E17.CNhs10605.480-44A623.62
lung, embryo E18.CNhs10583.1287-20I642.13
lung, neonate N00.CNhs11224.640-42C641.37
lung, neonate N06.CNhs11212.683-20E536.10
lung, neonate N07.CNhs11111.715-19A333.66
lung, neonate N10.CNhs11219.750-23E632.05
lung, neonate N20.CNhs11109.822-18A458.83
lung, neonate N25.CNhs11119.1359-25C752.32
lung, neonate N30.CNhs11133.1394-42H269.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C210.44
medulla oblongata, neonate N30.CNhs11200.1396-42A38.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.57
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.85
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I713.48
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I44.72
oviduct, adult pregnant day01.CNhs10500.988-6G67.26
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G810.89
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F54.44
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C38.74
skin, neonate N00.CNhs11124.650-25G47.27
skin, neonate N03.CNhs11215.662-22H35.61
skin, neonate N06.CNhs11097.693-20I55.97
skin, neonate N10.CNhs11108.762-6C45.09
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C911.31
spleen, adult.CNhs10465.25-2G236.05
spleen, embryo E16.CNhs11035.461-43C18.67
spleen, embryo E18.CNhs11011.1271-21F216.30
spleen, neonate N10.CNhs11116.752-24D19.42
spleen, neonate N20.CNhs11112.824-19H121.05
spleen, neonate N25.CNhs11099.1354-25G327.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.81
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D45.29
stomach, embryo E17.CNhs11006.1035-18D55.85
stomach, embryo E18.CNhs10999.1286-20C69.17
stomach, neonate N03.CNhs11193.1340-24B89.17
stomach, neonate N07.CNhs11210.718-18A99.17
stomach, neonate N25.CNhs11104.1355-25E49.42
stomach, neonate N30.CNhs11134.1386-42I14.80
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F53.44
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G56.03
testis, embryo E17.CNhs11029.486-18I54.78
testis, embryo E18.CNhs11027.503-18G55.58
testis, neonate N00.CNhs11189.1300-22B78.45
testis, neonate N07.CNhs11222.726-26I44.69
testis, neonate N10.CNhs11204.763-44D95.03
testis, neonate N20.CNhs11110.839-18H39.18
testis, neonate N30.CNhs11130.1391-42E27.49
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G22.57
tongue, adult.CNhs10499.32-1B412.92
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E416.42
uterus, adult pregnant day19.CNhs10497.590-15F55.82
uterus, adult.CNhs10509.92-27E55.86
vagina, adult.CNhs10502.89-27D58.79
vesicular gland, adult.CNhs10491.51-27F826.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A441.10
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A736.48
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A851.66
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A937.28
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.07
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.75
whole body, embryo E17.5.CNhs10513.490-9F98.10
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B39.12
whole body, neonate N00.CNhs10525.657-19C28.17
whole body, neonate N01.CNhs10576.659-23C66.50
whole body, neonate N06.CNhs10515.692-21D18.38
whole body, neonate N10.CNhs10518.761-6B414.14





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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