Personal tools

FFCP PHASE1:Mm9::chr17:66472880..66472922,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr17:66472880..66472922,+
|short_description=p1@Ddx11
|description=CAGE_peak_1_at_Ddx11_5end
|association_with_transcript=20bp_to_ENSMUST00000038387,ENSMUST00000163605,NM_001003919,uc008dha.1,uc008dhb.1_5end
|EntrezGene=320209
|EntrezGene=320209
|HGNC=
|HGNC=
|UniProt=Q6AXC6,E9Q6F8
|UniProt=Q6AXC6,E9Q6F8
|association_with_transcript=20bp_to_ENSMUST00000038387,ENSMUST00000163605,NM_001003919,uc008dha.1,uc008dhb.1_5end
|description=CAGE_peak_1_at_Ddx11_5end
|id=chr17:66472880..66472922,+
|ontology_enrichment_disease=
|phase1_expression=5.12476310735341,0,1.81999695755814,1.20985684522732,0,4.70061961353291,3.97141489012394,8.52213934714403,7.46180227403834,9.36258105287974,6.50628279256919,6.1424562426409,14.2096605842901,14.1621051918776,10.3264026162855,11.5410902412201,13.2916756844348,5.99378114180652,8.63820931716154,10.6097412949508,9.95006494767516,7.24823943766463,6.00759515019551,3.51983330145495,2.98232065387321,0.57423196411502,2.58457197695445,1.72376986148711,1.71021077510736,3.52842181663903,3.76941868114018,15.2407361630311,15.9916844771988,31.6963362030877,10.1098066912946,10.805251948302,13.0668388007916,1.25559489221072,2.3440060335714,3.14114246384279,4.70585190424811,2.73218193983378,3.88408282424923,2.39203954153597,2.02753862439029,2.0190142737785,0.782391344348039,1.74420125104357,0.439372365468944,1.1665793944457,1.81982348112971,2.87505128729943,5.36904339384756,7.97898356212479,6.72187598284928,2.57259436035947,2.86533439938757,0,2.02316460859598,1.5869729378161,2.53532561402472,2.37191172448392,4.4464739805557,0.899899717281399,1.97773272513395,1.4209602298922,0.299600110518405,1.53687322128622,4.25127410464758,4.18518408828241,3.99617426567626,3.71346279724945,2.87129103237098,3.91970557487853,4.60058260887535,0.919218786610021,1.10115880999389,0.510749352340751,0.921639199537461,2.2420668914133,1.64677758484337,1.56274011167028,1.3959149950069,0.56276261003168,0.61119299110724,2.06240009831567,4.41352210477219,2.23679334990361,0.984440513331393,2.79614772395106,3.18850937571846,1.72084775396277,0.679971333707751,1.07940638327563,1.29955283489534,3.13618820968135,2.80888840263504,3.74946709671727,3.63700406444016,2.12003744706204,2.53518155598025,1.28326477414318,12.7402619853323,7.11066703153331,6.061749148314,4.56047757855178,5.05524445014783,3.53970027129086,7.25026074212081,2.3750742250372,9.71517829890361,5.48037860961854,6.6878494204257,4.52167921657868,4.23319345688537,3.64433114856059,0.494389935468748,1.44599356919912,3.5384422077995,3.72063754879041,4.85851340612866,6.78825354389311,9.31958806090611,2.34224637609238,3.77004072264219,3.0654846625031,5.63131085177825,1.79970819298022,4.57452817463033,1.19832511523858,0.457500602818626,5.15182843662744,1.21677024134594,0.767146371990992,1.0389402227978,1.46017136760982,6.21220119486929,4.10543003013307,0.758168275301024,2.10441855886474,13.0120442962704,6.43725892413724,6.84236093260327,7.68594570962147,6.39543092022482,7.55870949680614,5.528401749024,2.32833033665114,8.62271971731369,12.1027891307404,7.2139960907219,6.1374805079721,10.5657954705727,8.70630416305416,6.58502836505419,10.7478504081986,5.61770549850588,3.08817488537658,4.83077948972507,7.45652781127807,8.44293815931946,10.2635375032778,9.2330446878232,5.90292695242211,7.0962871928194,6.27841650826101,5.633741429392,3.03589890154641,5.59503489705834,2.95501435342371,1.78351381000883,1.90059983652932,1.97595103761946,1.74468344388483,0.841159794256509,2.88132914661996,0.991256348951394,3.43785736662608,10.6644125267617,14.3986736553472,9.79392706047909,6.85723983719365,6.0042071838115,4.94586627892654,4.2707615539006,1.31759163779209,2.76468729680296,2.98434708061726,4.67913809085888,3.59527763461689,4.53889904736858,2.58883655230677,7.96605184002943,9.59687505921722,15.7790829942313,10.1825663922657,9.69762435838129,5.82127305089644,5.56481526693464,2.36176236767363,1.8839847340965,1.85095745882701,0.889357881261447,8.3422552858047,9.04171377520734,7.64531182108503,6.49152388443209,5.30589751455317,6.3656462945355,5.17853047411459,3.08056930872567,5.21666685057355,11.5014565221884,2.97712758134803,4.68056509671841,4.04126204715379,3.22915344339442,6.27176577772377,1.10851914099963,10.8010104709176,12.711268162478,16.1257831486429,14.7854856421756,8.20780661464897,4.52282917683426,1.17080188714679,6.14777062014145,5.75808193086815,4.78364305972461,1.47476983244164,4.83517949224508,1.73578870297814,1.50791283939272,0.54390568381871,1.96705709207614,3.58717770196152,0.80275294993896,0.820481806145422,3.60656879828686,1.26235463602186,5.99465616890888,4.29482618726302,6.03185513651837,5.73525115086125,6.68396022247182,5.94460714656548,5.66734982344852,5.84511715822624,6.32460444714438,0.321321316421807,3.97432238583152,8.90328018336276,6.35259141478947,3.95928295134085,5.30980553359851,9.46844481004428,13.9068836203785,6.41257271170054,2.36241514304618,4.61152721915891,5.94385074286909,4.72593848320757,7.12994756769443,3.79244109522979,3.16255825724996,5.15677716240934,2.38307724027652,11.3438489239725,7.50280365939976,5.35842587578981,3.90148514013002,5.88617098086833,5.59466670047211,2.13125464380219,1.40803024838226,0.21183207086382,1.98475558249466,5.44124634706884,4.03661066739764,6.99629929166608,4.77489376012546,5.58079059133208,3.20628920292836,0.927126510052548,6.83483523191411,13.002372681683,8.70414278637645,6.40452753815949,8.61173634642459,7.54967971581525,3.90950388985867,6.15786390224095,4.28419918793714,3.81868247206045,12.1789357528737,12.1991680276109,8.4244165841005,7.94535524854981,5.24070152990826,5.79916689454729,4.87655388779482,3.40282724579238,3.11075935900303,1.24267862617385,23.675103424736,14.054555328134,10.5893433892542,10.1114617938905,8.52454834953025,10.3063236549375,8.56707842114004,12.6298253298632,12.1636839533825,26.3326691700347,23.3304305068871,7.90027801570446,8.71718425747706,11.7090491167903,11.3031115990682,11.0996551313838,9.33802367471945,11.7791540529569,12.1105412283153,14.4382023425851,11.58343461156,11.998316031284,10.622909000633,14.3355644044091,9.58390597888865,0.906921534460845,4.66170502085536,13.6365062046403,5.87596157274275,3.09103350451505,2.43987218086537,4.2124873581471,2.78678892802786,3.00943262421218,0.564751842617067,0,2.29158205375759,0.343706364687375,0,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,9.54843597774425,6.3843979744165,8.53668028770671,6.56388136084394,3.77303692730368,3.67687016900028,4.66718128383392,7.0051919461224,5.13470735346904,2.27427490587418,4.56262739802432,5.84741658296836,6.64854703036165,5.05798703998467,6.77738533676237,10.4784612082276,6.83717523074647,5.01563973205633,4.53294490883637,4.85756436443511,7.88599280486455,6.56660482789549,7.15308569841963,6.68593516508711,6.02300034658116,5.16149108139227,6.76833499629258,5.26139422875686,6.65440157844723,3.36685362994643,4.50813068871862,6.79680928391388,4.09231043169689,4.18329471202108,4.43685205256625,3.49734809113124,4.91256377735358,2.36358159453128,1.53030665655075,2.20591419119516,3.2461496986859
|phase1_expression=5.12476310735341,0,1.81999695755814,1.20985684522732,0,4.70061961353291,3.97141489012394,8.52213934714403,7.46180227403834,9.36258105287974,6.50628279256919,6.1424562426409,14.2096605842901,14.1621051918776,10.3264026162855,11.5410902412201,13.2916756844348,5.99378114180652,8.63820931716154,10.6097412949508,9.95006494767516,7.24823943766463,6.00759515019551,3.51983330145495,2.98232065387321,0.57423196411502,2.58457197695445,1.72376986148711,1.71021077510736,3.52842181663903,3.76941868114018,15.2407361630311,15.9916844771988,31.6963362030877,10.1098066912946,10.805251948302,13.0668388007916,1.25559489221072,2.3440060335714,3.14114246384279,4.70585190424811,2.73218193983378,3.88408282424923,2.39203954153597,2.02753862439029,2.0190142737785,0.782391344348039,1.74420125104357,0.439372365468944,1.1665793944457,1.81982348112971,2.87505128729943,5.36904339384756,7.97898356212479,6.72187598284928,2.57259436035947,2.86533439938757,0,2.02316460859598,1.5869729378161,2.53532561402472,2.37191172448392,4.4464739805557,0.899899717281399,1.97773272513395,1.4209602298922,0.299600110518405,1.53687322128622,4.25127410464758,4.18518408828241,3.99617426567626,3.71346279724945,2.87129103237098,3.91970557487853,4.60058260887535,0.919218786610021,1.10115880999389,0.510749352340751,0.921639199537461,2.2420668914133,1.64677758484337,1.56274011167028,1.3959149950069,0.56276261003168,0.61119299110724,2.06240009831567,4.41352210477219,2.23679334990361,0.984440513331393,2.79614772395106,3.18850937571846,1.72084775396277,0.679971333707751,1.07940638327563,1.29955283489534,3.13618820968135,2.80888840263504,3.74946709671727,3.63700406444016,2.12003744706204,2.53518155598025,1.28326477414318,12.7402619853323,7.11066703153331,6.061749148314,4.56047757855178,5.05524445014783,3.53970027129086,7.25026074212081,2.3750742250372,9.71517829890361,5.48037860961854,6.6878494204257,4.52167921657868,4.23319345688537,3.64433114856059,0.494389935468748,1.44599356919912,3.5384422077995,3.72063754879041,4.85851340612866,6.78825354389311,9.31958806090611,2.34224637609238,3.77004072264219,3.0654846625031,5.63131085177825,1.79970819298022,4.57452817463033,1.19832511523858,0.457500602818626,5.15182843662744,1.21677024134594,0.767146371990992,1.0389402227978,1.46017136760982,6.21220119486929,4.10543003013307,0.758168275301024,2.10441855886474,13.0120442962704,6.43725892413724,6.84236093260327,7.68594570962147,6.39543092022482,7.55870949680614,5.528401749024,2.32833033665114,8.62271971731369,12.1027891307404,7.2139960907219,6.1374805079721,10.5657954705727,8.70630416305416,6.58502836505419,10.7478504081986,5.61770549850588,3.08817488537658,4.83077948972507,7.45652781127807,8.44293815931946,10.2635375032778,9.2330446878232,5.90292695242211,7.0962871928194,6.27841650826101,5.633741429392,3.03589890154641,5.59503489705834,2.95501435342371,1.78351381000883,1.90059983652932,1.97595103761946,1.74468344388483,0.841159794256509,2.88132914661996,0.991256348951394,3.43785736662608,10.6644125267617,14.3986736553472,9.79392706047909,6.85723983719365,6.0042071838115,4.94586627892654,4.2707615539006,1.31759163779209,2.76468729680296,2.98434708061726,4.67913809085888,3.59527763461689,4.53889904736858,2.58883655230677,7.96605184002943,9.59687505921722,15.7790829942313,10.1825663922657,9.69762435838129,5.82127305089644,5.56481526693464,2.36176236767363,1.8839847340965,1.85095745882701,0.889357881261447,8.3422552858047,9.04171377520734,7.64531182108503,6.49152388443209,5.30589751455317,6.3656462945355,5.17853047411459,3.08056930872567,5.21666685057355,11.5014565221884,2.97712758134803,4.68056509671841,4.04126204715379,3.22915344339442,6.27176577772377,1.10851914099963,10.8010104709176,12.711268162478,16.1257831486429,14.7854856421756,8.20780661464897,4.52282917683426,1.17080188714679,6.14777062014145,5.75808193086815,4.78364305972461,1.47476983244164,4.83517949224508,1.73578870297814,1.50791283939272,0.54390568381871,1.96705709207614,3.58717770196152,0.80275294993896,0.820481806145422,3.60656879828686,1.26235463602186,5.99465616890888,4.29482618726302,6.03185513651837,5.73525115086125,6.68396022247182,5.94460714656548,5.66734982344852,5.84511715822624,6.32460444714438,0.321321316421807,3.97432238583152,8.90328018336276,6.35259141478947,3.95928295134085,5.30980553359851,9.46844481004428,13.9068836203785,6.41257271170054,2.36241514304618,4.61152721915891,5.94385074286909,4.72593848320757,7.12994756769443,3.79244109522979,3.16255825724996,5.15677716240934,2.38307724027652,11.3438489239725,7.50280365939976,5.35842587578981,3.90148514013002,5.88617098086833,5.59466670047211,2.13125464380219,1.40803024838226,0.21183207086382,1.98475558249466,5.44124634706884,4.03661066739764,6.99629929166608,4.77489376012546,5.58079059133208,3.20628920292836,0.927126510052548,6.83483523191411,13.002372681683,8.70414278637645,6.40452753815949,8.61173634642459,7.54967971581525,3.90950388985867,6.15786390224095,4.28419918793714,3.81868247206045,12.1789357528737,12.1991680276109,8.4244165841005,7.94535524854981,5.24070152990826,5.79916689454729,4.87655388779482,3.40282724579238,3.11075935900303,1.24267862617385,23.675103424736,14.054555328134,10.5893433892542,10.1114617938905,8.52454834953025,10.3063236549375,8.56707842114004,12.6298253298632,12.1636839533825,26.3326691700347,23.3304305068871,7.90027801570446,8.71718425747706,11.7090491167903,11.3031115990682,11.0996551313838,9.33802367471945,11.7791540529569,12.1105412283153,14.4382023425851,11.58343461156,11.998316031284,10.622909000633,14.3355644044091,9.58390597888865,0.906921534460845,4.66170502085536,13.6365062046403,5.87596157274275,3.09103350451505,2.43987218086537,4.2124873581471,2.78678892802786,3.00943262421218,0.564751842617067,0,2.29158205375759,0.343706364687375,0,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,9.54843597774425,6.3843979744165,8.53668028770671,6.56388136084394,3.77303692730368,3.67687016900028,4.66718128383392,7.0051919461224,5.13470735346904,2.27427490587418,4.56262739802432,5.84741658296836,6.64854703036165,5.05798703998467,6.77738533676237,10.4784612082276,6.83717523074647,5.01563973205633,4.53294490883637,4.85756436443511,7.88599280486455,6.56660482789549,7.15308569841963,6.68593516508711,6.02300034658116,5.16149108139227,6.76833499629258,5.26139422875686,6.65440157844723,3.36685362994643,4.50813068871862,6.79680928391388,4.09231043169689,4.18329471202108,4.43685205256625,3.49734809113124,4.91256377735358,2.36358159453128,1.53030665655075,2.20591419119516,3.2461496986859
|short_description=p1@Ddx11
}}
}}

Revision as of 02:34, 18 April 2012

Short description:p1@Ddx11
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ddx11_5end
Coexpression cluster:NA
Association with transcript: 20bp_to_ENSMUST00000038387, ENSMUST00000163605, NM_001003919, uc008dha.1, uc008dhb.1_5end
EntrezGene:Ddx11
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ddx11

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.70
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.97
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.14
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E414.21
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.16
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.54
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.99
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.64
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.01
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.11
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.37
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.60
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F92.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H97.25
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C59.72
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I16.69
adrenal gland, embryo E18.CNhs11026.1262-18F54.52
adrenal gland, neonate N00.CNhs11191.1311-23C14.23
adrenal gland, neonate N25.CNhs11223.1377-27I33.64
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F53.72
bone (os femoris), neonate N16.CNhs11225.1525-43A64.86
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.63
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.57
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F15.15
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.21
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.11
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C613.01
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D47.69
eyeball, neonate N00.CNhs11207.633-15C66.40
eyeball, neonate N01.CNhs11140.1532-43E77.56
eyeball, neonate N02.CNhs11205.1551-44G85.53
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E28.62
forelimb, embryo E12.CNhs10600.359-14H212.10
forelimb, embryo E13.CNhs10589.384-1E27.21
forelimb, embryo E14.CNhs10577.413-26A86.14
forelimb, embryo E15.CNhs11007.437-20E710.57
forelimb, embryo E17.CNhs10598.1517-43C48.71
forelimb, embryo E18.CNhs11008.1520-43B56.59
gonad, embryo E13.CNhs11044.1564-45I610.75
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E97.46
heart, embryo E12.CNhs11015.353-12F58.44
heart, embryo E13.CNhs11013.376-3I910.26
heart, embryo E14.CNhs10597.403-26D49.23
heart, embryo E15.CNhs11017.431-16C85.90
heart, embryo E16.CNhs11021.457-17C67.10
heart, embryo E17.CNhs11025.479-18E56.28
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E33.04
heart, neonate N03.CNhs11221.1349-25I25.60
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G11.78
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I510.66
intestine, embryo E13.CNhs11010.381-16D514.40
intestine, embryo E15.CNhs10602.976-16D89.79
intestine, embryo E16.CNhs10585.463-22H46.86
intestine, embryo E17.CNhs10582.482-18D36.00
intestine, embryo E18.CNhs10526.1289-20F74.95
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I97.97
kidney, embryo E15.CNhs10997.434-16F89.60
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I210.18
kidney, embryo E18.CNhs11001.1288-20C79.70
kidney, neonate N00.CNhs11214.646-21G75.82
kidney, neonate N10.CNhs11206.758-6D55.56
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F88.34
liver, embryo E13.CNhs10524.378-3H69.04
liver, embryo E14.CNhs10594.409-16E17.65
liver, embryo E15.CNhs10520.433-16D76.49
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A36.37
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G210.80
lung, embryo E14.CNhs10604.404-26F812.71
lung, embryo E15.CNhs11020.432-17C516.13
lung, embryo E16.CNhs10998.458-17B614.79
lung, embryo E17.CNhs10605.480-44A68.21
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E56.15
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E64.78
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C74.84
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.94
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H78.90
ovary, neonate N00.CNhs11217.1299-22I46.35
oviduct, adult pregnant day01.CNhs10500.988-6G63.96
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F49.47
pancreas, embryo E15.CNhs11042.1556-45F213.91
pancreas, embryo E16.CNhs11003.460-26E56.41
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G95.94
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E611.34
pituitary gland, embryo E13.CNhs11009.370-44C77.50
pituitary gland, embryo E14.CNhs11037.398-44A55.36
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F65.89
pituitary gland, embryo E17.CNhs11039.1265-44F55.59
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C35.44
skin, neonate N00.CNhs11124.650-25G44.04
skin, neonate N03.CNhs11215.662-22H37.00
skin, neonate N06.CNhs11097.693-20I54.77
skin, neonate N10.CNhs11108.762-6C45.58
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G26.83
spleen, embryo E16.CNhs11035.461-43C113.00
spleen, embryo E18.CNhs11011.1271-21F28.70
spleen, neonate N10.CNhs11116.752-24D16.40
spleen, neonate N20.CNhs11112.824-19H18.61
spleen, neonate N25.CNhs11099.1354-25G37.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.28
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E312.18
stomach, embryo E15.CNhs10603.1252-16G812.20
stomach, embryo E16.CNhs11022.459-17D48.42
stomach, embryo E17.CNhs11006.1035-18D57.95
stomach, embryo E18.CNhs10999.1286-20C65.24
stomach, neonate N03.CNhs11193.1340-24B85.80
stomach, neonate N07.CNhs11210.718-18A94.88
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I13.11
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G523.68
testis, embryo E13.CNhs11031.389-23F514.05
testis, embryo E15.CNhs11034.443-27C510.59
testis, embryo E16.CNhs11033.470-26G510.11
testis, embryo E17.CNhs11029.486-18I58.52
testis, embryo E18.CNhs11027.503-18G510.31
testis, neonate N00.CNhs11189.1300-22B78.57
testis, neonate N07.CNhs11222.726-26I412.63
testis, neonate N10.CNhs11204.763-44D912.16
testis, neonate N20.CNhs11110.839-18H326.33
testis, neonate N30.CNhs11130.1391-42E223.33
thymus, adult.CNhs10471.38-12B57.90
thymus, embryo E14.CNhs11041.402-44I48.72
thymus, embryo E15.CNhs11005.430-45I211.71
thymus, embryo E16.CNhs11002.456-26C511.30
thymus, embryo E17.CNhs10581.478-18C111.10
thymus, embryo E18.CNhs10595.1273-19G49.34
thymus, neonate N02.CNhs11181.1541-43F811.78
thymus, neonate N03.CNhs11137.2104-43C712.11
thymus, neonate N06.CNhs11197.681-26C414.44
thymus, neonate N07.CNhs11211.713-19D311.58
thymus, neonate N10.CNhs11194.748-24E412.00
thymus, neonate N20.CNhs11186.820-7A210.62
thymus, neonate N25.CNhs11125.1362-25G714.34
thymus, neonate N30.CNhs11132.1393-42G29.58
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.64
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.88
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I89.55
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H28.54
whole body, embryo E14.5.CNhs10578.420-27D26.56
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.69
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.02
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.18
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:66472880..66472922,%2B&oldid=806703"