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FFCP PHASE1:Mm9::chr18:61204793..61204860,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr18:61204793..61204860,+
|short_description=p1@Pdgfrb
|description=CAGE_peak_1_at_Pdgfrb_5end
|association_with_transcript=0bp_to_ENSMUST00000025522,ENSMUST00000115274,NM_001146268,NM_008809,uc008fbk.2,uc008fbl.2_5end
|EntrezGene=18596
|EntrezGene=18596
|HGNC=
|HGNC=
|UniProt=E9QPE2,E9QN12,P05622,Q7TMR8
|UniProt=E9QPE2,E9QN12,P05622,Q7TMR8
|association_with_transcript=0bp_to_ENSMUST00000025522,ENSMUST00000115274,NM_001146268,NM_008809,uc008fbk.2,uc008fbl.2_5end
|description=CAGE_peak_1_at_Pdgfrb_5end
|id=chr18:61204793..61204860,+
|ontology_enrichment_disease=
|phase1_expression=62.938496912184,0.348975407639361,0,0,0,0.16787927191189,0,0.129123323441576,0,0.234064526321993,0,0,0,0,0.999329285446988,1.82227740650843,0,0,0.411343300817216,0,24.4924675635081,24.226992093016,21.6795824985316,0.319984845586813,0.45881856213434,0,0,0,0.190023419456374,1.26015064879965,0.221730510655305,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,128.037063881162,116.583470902442,97.2797786456912,129.094571817426,22.2385659508055,25.2639110144643,27.8034755676225,18.4782076545479,20.125359011096,0.167782606057736,0,0.336093799142464,134.032166174728,215.759680273884,161.405364882839,8.49729135610311,14.8117474196169,12.6766280701236,31.1736969503602,27.5681386794453,28.3468410943641,35.5991890524111,18.4724829885986,35.0532129306534,10.373894243682,8.29516898467821,11.0704869431986,10.7265730289205,13.139945282575,14.1355866209033,9.30930074033651,8.4344014496048,11.9498442259303,8.8092704799511,14.1732945274558,9.36999852863085,13.7161739239402,13.8146341839639,9.37644067002168,12.0048689570594,15.1945904708554,12.6822545654752,16.7938293719991,12.5287079103211,15.4711540034999,10.7531194533121,20.1776065485117,13.0439019915755,37.858650587181,0,1.07940638327563,1.29955283489534,1.79210754838934,17.1342192560737,207.07284193234,133.270220361272,141.335829804136,14.084341977668,184.790127476618,119.758462662123,85.3280043783997,0,0,0,8.44960709921044,30.5546702703663,38.8918404349841,44.4122436521308,42.6251669636998,38.9740190362739,30.2952507510771,37.5107975762898,36.6946446682652,25.2138867089061,55.2369543434063,22.1152637987469,36.8828417880093,36.2180090275045,38.7900202508178,11.1835056730873,12.0040126774734,15.9179497178226,16.3492515333498,16.1750418082992,5.99902730993408,10.5468288470644,18.574039286198,22.4175295381127,15.4554853098823,17.5562563394199,19.9458056717658,13.714010940931,18.6577452527921,58.0484373946803,46.9014279200051,10.108910337347,20.2024181651015,35.5228809288181,20.6911893990126,23.2280147448901,29.2367346601287,33.8141400782099,27.5444498612427,23.0506242416933,30.0095910057258,47.2093904522924,41.9815497972559,51.3777282558731,32.0025769344259,48.380221365254,39.0042426504827,47.7414556466429,72.4484731219315,4.91549231119264,4.88961023517959,4.26245249093389,20.7125772535502,28.1431271977315,25.2086886045421,32.1972840395886,30.1049274573528,30.0820870130388,34.4150238230604,37.0217293931474,36.6643175032912,35.2158078814848,74.6961961559883,92.0130988345463,71.9303938132635,64.7672840108599,83.6105988877116,14.930586348053,17.8024979416162,1.32167513193519,6.61126416658861,35.8324260899193,49.6986477781338,35.6962867862199,31.8659968904881,31.8000602698165,25.1097826468578,22.302865892592,21.4108641141214,26.8928673416288,33.026774358831,30.2194335034636,26.0657628509724,17.9394581395996,19.9141273254367,32.433211062977,47.184635707818,56.3538678365402,55.3931611739255,52.9490289967618,55.8281126326936,74.2396945838781,63.4723636312289,51.3385840041296,44.4229790118482,5.33614728756868,12.1796927172749,11.9900987019054,5.39669069723649,5.27436315610108,6.75296047306767,9.16653066413111,13.2340223227373,9.72811360650212,8.78596522201861,8.62609239164127,20.8398930694362,23.402825483592,19.9537313578218,12.19902411949,19.2977408545347,66.3263952698111,47.7518357661622,57.3636717075931,58.0528193351143,58.437871823837,62.4798340257973,85.6957107189649,104.981902547496,122.797777258723,159.897505926416,172.370604918744,111.590917321418,118.289212578138,111.524424166345,0,0,15.7364567366092,20.4193192265502,20.2293743384618,19.4571399743057,29.5082901678016,64.6325573643195,3.15508219416257,5.46614242015294,0.430846795465598,0.955875191810208,1.55959071857676,0.566153061577665,6.8817819284732,4.67609372658099,7.11518000303742,14.1381379225595,42.4400854772723,76.034012765918,69.8785055626841,82.6500316092403,11.9470624505967,46.6138821417564,35.3718561648759,30.7426280002114,38.0939441816197,30.1286444985049,30.2361103006819,41.8063788899131,32.7977588113944,15.8018378967908,21.0837217149998,6.18813259489121,18.7241783164583,38.3530130286691,45.7929740590951,43.08174404135,41.1429342050075,55.2943334566419,47.7192159746151,67.2867537543264,9.85621173867584,26.2671767871137,8.82113592219848,31.4932743118227,37.7826758468419,25.150489695041,26.3812880246932,25.1135576609944,20.4036585640896,17.8008289930089,12.1318325366475,97.2082148106778,74.0778109478847,23.9227940395958,15.4464477324758,12.8115776995653,9.17883521966819,13.0154850661002,12.2997976685937,9.54670618015114,32.4244393420664,46.7634774391752,33.9136770180456,27.8087433699243,20.0893558646483,20.3645163041079,29.1766698710436,23.8197907205467,21.1272406465622,11.1841076355647,0.56369293868419,64.1425982528669,70.6507754251807,53.8629791713012,42.4935819241735,44.6044171295654,40.1361756168479,18.228613878153,8.703325587334,4.1069300540421,8.3528701814781,6.00421129193539,61.4257402329198,47.4524622101502,32.0904432755154,22.0202835671002,21.8549490259391,11.7791540529569,10.3382669022204,8.27924889574811,10.05929847846,5.84791873793675,5.26272555994663,6.25376970662141,4.32444538071805,32.19571447336,1.10992976687032,0.807424709485281,1.17519231454855,27.0465431645067,64.7504540306578,52.1982129161705,34.9420457898877,3.51100472824754,11.2950368523413,6.44455331110048,8.02053718815155,8.59265911718438,6.16574267793578,9.06472676867641,7.42524750254986,11.7083512838297,12.2348450425735,8.28416498802912,14.3226539666164,40.3015122135041,30.3905818242359,30.631446350605,11.738337107167,13.420576116851,28.89207461421,31.9354338720286,29.2036480728552,30.3236654116557,32.4453503859507,30.1802146217722,31.2762634949407,31.6284252880054,32.1638626151434,23.3383908728706,30.1299247456624,25.2711078807454,32.1427002626579,23.5518272215036,26.0580631812916,26.2664193115819,32.4273218328356,34.0110614919649,33.7852675691037,31.138175704137,33.1099630899718,25.7808317209086,31.6423585260858,18.5176949647054,26.8115140960634,26.7932192061533,26.6000178060298,31.916989284309,36.4593494754357,55.2081377242861,40.7040998695011,46.6270187284807,50.5001196661747,57.353768971074,45.9098314528434
|phase1_expression=62.938496912184,0.348975407639361,0,0,0,0.16787927191189,0,0.129123323441576,0,0.234064526321993,0,0,0,0,0.999329285446988,1.82227740650843,0,0,0.411343300817216,0,24.4924675635081,24.226992093016,21.6795824985316,0.319984845586813,0.45881856213434,0,0,0,0.190023419456374,1.26015064879965,0.221730510655305,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,128.037063881162,116.583470902442,97.2797786456912,129.094571817426,22.2385659508055,25.2639110144643,27.8034755676225,18.4782076545479,20.125359011096,0.167782606057736,0,0.336093799142464,134.032166174728,215.759680273884,161.405364882839,8.49729135610311,14.8117474196169,12.6766280701236,31.1736969503602,27.5681386794453,28.3468410943641,35.5991890524111,18.4724829885986,35.0532129306534,10.373894243682,8.29516898467821,11.0704869431986,10.7265730289205,13.139945282575,14.1355866209033,9.30930074033651,8.4344014496048,11.9498442259303,8.8092704799511,14.1732945274558,9.36999852863085,13.7161739239402,13.8146341839639,9.37644067002168,12.0048689570594,15.1945904708554,12.6822545654752,16.7938293719991,12.5287079103211,15.4711540034999,10.7531194533121,20.1776065485117,13.0439019915755,37.858650587181,0,1.07940638327563,1.29955283489534,1.79210754838934,17.1342192560737,207.07284193234,133.270220361272,141.335829804136,14.084341977668,184.790127476618,119.758462662123,85.3280043783997,0,0,0,8.44960709921044,30.5546702703663,38.8918404349841,44.4122436521308,42.6251669636998,38.9740190362739,30.2952507510771,37.5107975762898,36.6946446682652,25.2138867089061,55.2369543434063,22.1152637987469,36.8828417880093,36.2180090275045,38.7900202508178,11.1835056730873,12.0040126774734,15.9179497178226,16.3492515333498,16.1750418082992,5.99902730993408,10.5468288470644,18.574039286198,22.4175295381127,15.4554853098823,17.5562563394199,19.9458056717658,13.714010940931,18.6577452527921,58.0484373946803,46.9014279200051,10.108910337347,20.2024181651015,35.5228809288181,20.6911893990126,23.2280147448901,29.2367346601287,33.8141400782099,27.5444498612427,23.0506242416933,30.0095910057258,47.2093904522924,41.9815497972559,51.3777282558731,32.0025769344259,48.380221365254,39.0042426504827,47.7414556466429,72.4484731219315,4.91549231119264,4.88961023517959,4.26245249093389,20.7125772535502,28.1431271977315,25.2086886045421,32.1972840395886,30.1049274573528,30.0820870130388,34.4150238230604,37.0217293931474,36.6643175032912,35.2158078814848,74.6961961559883,92.0130988345463,71.9303938132635,64.7672840108599,83.6105988877116,14.930586348053,17.8024979416162,1.32167513193519,6.61126416658861,35.8324260899193,49.6986477781338,35.6962867862199,31.8659968904881,31.8000602698165,25.1097826468578,22.302865892592,21.4108641141214,26.8928673416288,33.026774358831,30.2194335034636,26.0657628509724,17.9394581395996,19.9141273254367,32.433211062977,47.184635707818,56.3538678365402,55.3931611739255,52.9490289967618,55.8281126326936,74.2396945838781,63.4723636312289,51.3385840041296,44.4229790118482,5.33614728756868,12.1796927172749,11.9900987019054,5.39669069723649,5.27436315610108,6.75296047306767,9.16653066413111,13.2340223227373,9.72811360650212,8.78596522201861,8.62609239164127,20.8398930694362,23.402825483592,19.9537313578218,12.19902411949,19.2977408545347,66.3263952698111,47.7518357661622,57.3636717075931,58.0528193351143,58.437871823837,62.4798340257973,85.6957107189649,104.981902547496,122.797777258723,159.897505926416,172.370604918744,111.590917321418,118.289212578138,111.524424166345,0,0,15.7364567366092,20.4193192265502,20.2293743384618,19.4571399743057,29.5082901678016,64.6325573643195,3.15508219416257,5.46614242015294,0.430846795465598,0.955875191810208,1.55959071857676,0.566153061577665,6.8817819284732,4.67609372658099,7.11518000303742,14.1381379225595,42.4400854772723,76.034012765918,69.8785055626841,82.6500316092403,11.9470624505967,46.6138821417564,35.3718561648759,30.7426280002114,38.0939441816197,30.1286444985049,30.2361103006819,41.8063788899131,32.7977588113944,15.8018378967908,21.0837217149998,6.18813259489121,18.7241783164583,38.3530130286691,45.7929740590951,43.08174404135,41.1429342050075,55.2943334566419,47.7192159746151,67.2867537543264,9.85621173867584,26.2671767871137,8.82113592219848,31.4932743118227,37.7826758468419,25.150489695041,26.3812880246932,25.1135576609944,20.4036585640896,17.8008289930089,12.1318325366475,97.2082148106778,74.0778109478847,23.9227940395958,15.4464477324758,12.8115776995653,9.17883521966819,13.0154850661002,12.2997976685937,9.54670618015114,32.4244393420664,46.7634774391752,33.9136770180456,27.8087433699243,20.0893558646483,20.3645163041079,29.1766698710436,23.8197907205467,21.1272406465622,11.1841076355647,0.56369293868419,64.1425982528669,70.6507754251807,53.8629791713012,42.4935819241735,44.6044171295654,40.1361756168479,18.228613878153,8.703325587334,4.1069300540421,8.3528701814781,6.00421129193539,61.4257402329198,47.4524622101502,32.0904432755154,22.0202835671002,21.8549490259391,11.7791540529569,10.3382669022204,8.27924889574811,10.05929847846,5.84791873793675,5.26272555994663,6.25376970662141,4.32444538071805,32.19571447336,1.10992976687032,0.807424709485281,1.17519231454855,27.0465431645067,64.7504540306578,52.1982129161705,34.9420457898877,3.51100472824754,11.2950368523413,6.44455331110048,8.02053718815155,8.59265911718438,6.16574267793578,9.06472676867641,7.42524750254986,11.7083512838297,12.2348450425735,8.28416498802912,14.3226539666164,40.3015122135041,30.3905818242359,30.631446350605,11.738337107167,13.420576116851,28.89207461421,31.9354338720286,29.2036480728552,30.3236654116557,32.4453503859507,30.1802146217722,31.2762634949407,31.6284252880054,32.1638626151434,23.3383908728706,30.1299247456624,25.2711078807454,32.1427002626579,23.5518272215036,26.0580631812916,26.2664193115819,32.4273218328356,34.0110614919649,33.7852675691037,31.138175704137,33.1099630899718,25.7808317209086,31.6423585260858,18.5176949647054,26.8115140960634,26.7932192061533,26.6000178060298,31.916989284309,36.4593494754357,55.2081377242861,40.7040998695011,46.6270187284807,50.5001196661747,57.353768971074,45.9098314528434
|short_description=p1@Pdgfrb
}}
}}

Revision as of 03:39, 18 April 2012

Short description:p1@Pdgfrb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pdgfrb_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000025522, ENSMUST00000115274, NM_001146268, NM_008809, uc008fbk.2, uc008fbl.2_5end
EntrezGene:Pdgfrb
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Pdgfrb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G762.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A324.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H224.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I921.68
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8128.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9116.58
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B397.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7129.09
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C222.24
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B825.26
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C327.80
Mouse Astrocytes, donor2.CNhs12078.11552-120C418.48
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1134.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1215.76
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5161.41
Mouse Granule cells, donor1.CNhs12131.11713-123C38.50
Mouse Granule cells, donor2.CNhs12357.11731-123E314.81
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C631.17
Mouse Meningeal cells, donor3.CNhs12109.11639-122D127.57
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C728.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E735.60
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D218.47
Mouse Microglia, donor1.CNhs12629.11718-123C835.05
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.30
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.07
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.43
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.72
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.81
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.47
Mouse Schwann, donor1.CNhs12507.11728-123D910.75
Mouse Schwann, donor2.CNhs12573.11746-123F920.18
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F737.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7207.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3133.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8141.34
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1184.79
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8119.76
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B685.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.45
accessory axillary lymph node, adult.CNhs10475.1063-29H930.55
adrenal gland, adult.CNhs10508.49-24D738.89
adrenal gland, embryo E14.CNhs11038.406-44C544.41
adrenal gland, embryo E16.CNhs11004.1254-43D642.63
adrenal gland, embryo E17.CNhs11043.1263-45I138.97
adrenal gland, embryo E18.CNhs11026.1262-18F530.30
adrenal gland, neonate N00.CNhs11191.1311-23C137.51
adrenal gland, neonate N25.CNhs11223.1377-27I336.69
amnion, adult pregnant day17.5.CNhs10488.583-22A825.21
aorta, adult.CNhs10498.46-23H155.24
bone (os femoris), adult.CNhs10483.56-12G222.12
bone (os femoris), neonate N02.CNhs11227.1985-43F536.88
bone (os femoris), neonate N16.CNhs11225.1525-43A636.22
bone (os femoris), neonate N20.CNhs11195.1350-25C338.79
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B212.00
cerebellum, neonate N30.CNhs11135.1395-42I215.92
colon, adult.CNhs10468.36-18H716.35
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.18
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.55
corpora quadrigemina, adult.CNhs10501.16-22A418.57
corpus striatum, adult.CNhs10487.19-21D822.42
corpus striatum, neonate N00.CNhs11226.630-43F115.46
cortex, adult.CNhs10473.12-14D517.56
cortex, neonate N30.CNhs11107.1392-42F219.95
diencephalon, adult.CNhs10482.20-12F213.71
diencephalon, neonate N30.CNhs11201.1388-42B218.66
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B158.05
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A246.90
epididymis, adult.CNhs10490.58-23B210.11
eyeball, adult.CNhs10484.31-12G420.20
eyeball, embryo E12.CNhs11016.345-16C635.52
eyeball, embryo E14.CNhs10521.399-16E220.69
eyeball, embryo E15.CNhs10593.426-16C923.23
eyeball, embryo E17.CNhs11023.1261-18D429.24
eyeball, neonate N00.CNhs11207.633-15C633.81
eyeball, neonate N01.CNhs11140.1532-43E727.54
eyeball, neonate N02.CNhs11205.1551-44G823.05
eyeball, neonate N16.CNhs11188.777-19A230.01
forelimb, embryo E11.CNhs10596.335-25E247.21
forelimb, embryo E12.CNhs10600.359-14H241.98
forelimb, embryo E13.CNhs10589.384-1E251.38
forelimb, embryo E14.CNhs10577.413-26A832.00
forelimb, embryo E15.CNhs11007.437-20E748.38
forelimb, embryo E17.CNhs10598.1517-43C439.00
forelimb, embryo E18.CNhs11008.1520-43B547.74
gonad, embryo E13.CNhs11044.1564-45I672.45
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.26
heart, embryo E11.CNhs10586.331-24E920.71
heart, embryo E12.CNhs11015.353-12F528.14
heart, embryo E13.CNhs11013.376-3I925.21
heart, embryo E14.CNhs10597.403-26D432.20
heart, embryo E15.CNhs11017.431-16C830.10
heart, embryo E16.CNhs11021.457-17C630.08
heart, embryo E17.CNhs11025.479-18E534.42
heart, embryo E18.CNhs11030.1283-20G337.02
heart, neonate N00.CNhs11213.639-21E336.66
heart, neonate N03.CNhs11221.1349-25I235.22
heart, neonate N10.CNhs11118.749-24G174.70
heart, neonate N16.CNhs11209.782-15G192.01
heart, neonate N20.CNhs11127.821-26I671.93
heart, neonate N25.CNhs11196.1351-25D364.77
heart, neonate N30.CNhs11202.1390-42D283.61
hippocampus, adult.CNhs10478.13-16E814.93
hippocampus, neonate N00.CNhs11228.627-43G117.80
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A36.61
intestine, embryo E12.CNhs11019.1251-16I535.83
intestine, embryo E13.CNhs11010.381-16D549.70
intestine, embryo E15.CNhs10602.976-16D835.70
intestine, embryo E16.CNhs10585.463-22H431.87
intestine, embryo E17.CNhs10582.482-18D331.80
intestine, embryo E18.CNhs10526.1289-20F725.11
intestine, neonate N00.CNhs11126.644-26D122.30
intestine, neonate N01.CNhs11192.1322-23E921.41
intestine, neonate N06.CNhs11102.688-20B826.89
intestine, neonate N07.CNhs11095.720-20F233.03
intestine, neonate N10.CNhs11098.755-23A530.22
intestine, neonate N20.CNhs11187.827-18D126.07
intestine, neonate N25.CNhs11121.1352-25E317.94
intestine, neonate N30.CNhs11131.1384-42G119.91
kidney, embryo E14.CNhs10606.411-4I932.43
kidney, embryo E15.CNhs10997.434-16F847.18
kidney, embryo E16.CNhs10584.464-22A556.35
kidney, embryo E17.CNhs11028.483-18I255.39
kidney, embryo E18.CNhs11001.1288-20C752.95
kidney, neonate N00.CNhs11214.646-21G755.83
kidney, neonate N10.CNhs11206.758-6D574.24
kidney, neonate N20.CNhs11113.832-19I163.47
kidney, neonate N25.CNhs11122.1353-25F351.34
kidney, neonate N30.CNhs11203.1385-42H144.42
liver, adult pregnant day01.CNhs10466.508-5B25.34
liver, embryo E12.CNhs10601.355-15F812.18
liver, embryo E13.CNhs10524.378-3H611.99
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D75.27
liver, embryo E16.CNhs10523.462-17F56.75
liver, embryo E17.CNhs10510.481-18A39.17
liver, embryo E18.CNhs10579.499-43G413.23
liver, neonate N00.CNhs11117.641-24F49.73
liver, neonate N03.CNhs11123.1345-25G28.79
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H220.84
liver, neonate N10.CNhs11115.751-24B923.40
liver, neonate N20.CNhs11220.823-25A319.95
liver, neonate N25.CNhs11198.1368-26H112.20
liver, neonate N30.CNhs11106.1382-42D119.30
lung, adult.CNhs10474.28-22B166.33
lung, embryo E12.CNhs10522.354-16G247.75
lung, embryo E14.CNhs10604.404-26F857.36
lung, embryo E15.CNhs11020.432-17C558.05
lung, embryo E16.CNhs10998.458-17B658.44
lung, embryo E17.CNhs10605.480-44A662.48
lung, embryo E18.CNhs10583.1287-20I685.70
lung, neonate N00.CNhs11224.640-42C6104.98
lung, neonate N06.CNhs11212.683-20E5122.80
lung, neonate N07.CNhs11111.715-19A3159.90
lung, neonate N10.CNhs11219.750-23E6172.37
lung, neonate N20.CNhs11109.822-18A4111.59
lung, neonate N25.CNhs11119.1359-25C7118.29
lung, neonate N30.CNhs11133.1394-42H2111.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B615.74
mammary gland, adult pregnant day19.CNhs10476.588-5H220.42
medulla oblongata, adult.CNhs10477.17-12C220.23
medulla oblongata, neonate N30.CNhs11200.1396-42A319.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C729.51
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C264.63
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I914.14
ovary, adult.CNhs10507.91-2I742.44
ovary, embryo E18.CNhs11040.505-44H776.03
ovary, neonate N00.CNhs11217.1299-22I469.88
oviduct, adult pregnant day01.CNhs10500.988-6G682.65
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F446.61
pancreas, embryo E15.CNhs11042.1556-45F235.37
pancreas, embryo E16.CNhs11003.460-26E530.74
pancreas, embryo E17.CNhs10599.1558-45G338.09
pancreas, embryo E18.CNhs10580.1535-43I730.13
pancreas, neonate N00.CNhs11105.645-26G930.24
pancreas, neonate N01.CNhs11138.1531-43D741.81
pancreas, neonate N02.CNhs11139.1539-43D832.80
pancreas, neonate N16.CNhs11136.787-43B615.80
pancreas, neonate N25.CNhs11094.1555-45E221.08
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G818.72
pituitary gland, embryo E12.CNhs11018.346-16E638.35
pituitary gland, embryo E13.CNhs11009.370-44C745.79
pituitary gland, embryo E14.CNhs11037.398-44A543.08
pituitary gland, embryo E15.CNhs10592.427-16B941.14
pituitary gland, embryo E16.CNhs11036.449-43F655.29
pituitary gland, embryo E17.CNhs11039.1265-44F547.72
pituitary gland, neonate N00.CNhs11190.1308-22E967.29
placenta, adult pregnant day10.CNhs10472.539-13I79.86
placenta, adult pregnant day17.CNhs10464.577-18G326.27
prostate, adult.CNhs10470.859-1F88.82
skin, adult.CNhs10492.30-1C331.49
skin, neonate N00.CNhs11124.650-25G437.78
skin, neonate N03.CNhs11215.662-22H325.15
skin, neonate N06.CNhs11097.693-20I526.38
skin, neonate N10.CNhs11108.762-6C425.11
small intestine, neonate N16.CNhs11114.790-21I120.40
spinal cord, adult.CNhs10505.24-13C917.80
spleen, adult.CNhs10465.25-2G212.13
spleen, embryo E16.CNhs11035.461-43C197.21
spleen, embryo E18.CNhs11011.1271-21F274.08
spleen, neonate N10.CNhs11116.752-24D123.92
spleen, neonate N20.CNhs11112.824-19H115.45
spleen, neonate N25.CNhs11099.1354-25G312.81
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.30
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E332.42
stomach, embryo E15.CNhs10603.1252-16G846.76
stomach, embryo E16.CNhs11022.459-17D433.91
stomach, embryo E17.CNhs11006.1035-18D527.81
stomach, embryo E18.CNhs10999.1286-20C620.09
stomach, neonate N03.CNhs11193.1340-24B820.36
stomach, neonate N07.CNhs11210.718-18A929.18
stomach, neonate N25.CNhs11104.1355-25E423.82
stomach, neonate N30.CNhs11134.1386-42I121.13
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F564.14
testis, embryo E15.CNhs11034.443-27C570.65
testis, embryo E16.CNhs11033.470-26G553.86
testis, embryo E17.CNhs11029.486-18I542.49
testis, embryo E18.CNhs11027.503-18G544.60
testis, neonate N00.CNhs11189.1300-22B740.14
testis, neonate N07.CNhs11222.726-26I418.23
testis, neonate N10.CNhs11204.763-44D98.70
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E28.35
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I461.43
thymus, embryo E15.CNhs11005.430-45I247.45
thymus, embryo E16.CNhs11002.456-26C532.09
thymus, embryo E17.CNhs10581.478-18C122.02
thymus, embryo E18.CNhs10595.1273-19G421.85
thymus, neonate N02.CNhs11181.1541-43F811.78
thymus, neonate N03.CNhs11137.2104-43C710.34
thymus, neonate N06.CNhs11197.681-26C48.28
thymus, neonate N07.CNhs11211.713-19D310.06
thymus, neonate N10.CNhs11194.748-24E45.85
thymus, neonate N20.CNhs11186.820-7A25.26
thymus, neonate N25.CNhs11125.1362-25G76.25
thymus, neonate N30.CNhs11132.1393-42G24.32
tongue, adult.CNhs10499.32-1B432.20
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E427.05
uterus, adult pregnant day19.CNhs10497.590-15F564.75
uterus, adult.CNhs10509.92-27E552.20
vagina, adult.CNhs10502.89-27D534.94
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I814.32
whole body, embryo E12.CNhs10587.857-27C940.30
whole body, embryo E13.CNhs10512.372-23H230.39
whole body, embryo E14.5.CNhs10578.420-27D230.63
whole body, embryo E14.CNhs10519.395-14B111.74
whole body, embryo E16.CNhs10514.453-14F213.42
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G528.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G531.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G529.20
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G530.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G532.45
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G530.18
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G531.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G531.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G532.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G525.27
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G532.14
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.55
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G526.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G526.27
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G532.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G534.01
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G533.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G531.14
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G533.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G525.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G531.64
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G526.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G526.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G526.60
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G531.92
whole body, embryo E17.5.CNhs10513.490-9F936.46
whole body, embryo E17.CNhs10517.475-3I555.21
whole body, embryo E18.CNhs10516.493-3B340.70
whole body, neonate N00.CNhs10525.657-19C246.63
whole body, neonate N01.CNhs10576.659-23C650.50
whole body, neonate N06.CNhs10515.692-21D157.35
whole body, neonate N10.CNhs10518.761-6B445.91





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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