Personal tools

FFCP PHASE1:Mm9::chr1:120286045..120286058,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr1:120286045..120286058,+
|short_description=p2@Clasp1
|description=CAGE_peak_2_at_Clasp1_5end
|association_with_transcript=410bp_to_ENSMUST00000049404,ENSMUST00000070989,ENSMUST00000165223,NM_001081276,NM_029709,NM_177548,uc007cid.1,uc007cie.1,uc007cif.1,uc007cii.2,uc007cij.2,uc011wqm.1,uc011wqn.1_5end
|EntrezGene=76707
|EntrezGene=76707
|HGNC=
|HGNC=
|UniProt=E9QKH0,E9QNY9,E9Q6L0,A5D6Q8,Q80TV8,B2RY22
|UniProt=E9QKH0,E9QNY9,E9Q6L0,A5D6Q8,Q80TV8,B2RY22
|association_with_transcript=410bp_to_ENSMUST00000049404,ENSMUST00000070989,ENSMUST00000165223,NM_001081276,NM_029709,NM_177548,uc007cid.1,uc007cie.1,uc007cif.1,uc007cii.2,uc007cij.2,uc011wqm.1,uc011wqn.1_5end
|description=CAGE_peak_2_at_Clasp1_5end
|id=chr1:120286045..120286058,+
|ontology_enrichment_disease=
|phase1_expression=1.92178616525753,1.74487703819681,0.909998478779072,1.81478526784098,1.50268718983904,0.503637815735669,1.16806320297763,0.387369970324729,0.422366166455,0.468129052643987,0.171217968225505,0.398860794976682,0.342401459862411,0.0874204024189974,0.999329285446988,0.607425802169478,0.699561878128147,0.630924330716475,0.685572168028694,1.27316895539409,0.680346321208558,0.893618560807968,1.30599894569468,1.43993180514066,0.91763712426868,1.14846392823004,1.29228598847722,0.646413698057667,1.14014051673824,1.00812051903972,0.443461021310609,0.635030673459631,0,0,0,0.166234645358492,0.204169356262369,3.34825304589526,0.7813353445238,2.61761871986899,3.52938892818609,1.36609096991689,1.45653105909346,3.39921408534059,3.85232338634155,3.67093504323363,0,0,0.439372365468944,0.58328969722285,0.55994568650145,0,1.17447824240415,2.17608642603403,0,0.257259436035947,0.85960031981627,1.03134418455488,2.02316460859598,4.7609188134483,1.90149421051854,0,0,0,0,0,0,0,1.97010263386108,1.4850653216486,1.89292465216244,0.856952953211411,0.662605622854841,2.44981598429908,2.01275489138296,0.919218786610021,1.10115880999389,0.766124028511126,0.614426133024974,3.82470234417562,3.20206752608434,5.73004707612436,0.558365998002762,1.68828783009504,0.45839474333043,1.17851434189467,0.996601765593721,0.559198337475902,0.530083353332288,1.43585964202892,1.73918693221007,0,0,0,0.649776417447669,0.448026887097336,0.421333260395256,1.70430322578058,0.259786004602869,0.70667914902068,1.83096445709685,0,0,0,1.08245520505607,2.53359865475099,0.505524445014783,0.91347103775248,0.517875767294343,0.742210695324124,1.90833859442749,1.52232739156071,1.15307748628029,1.3565037649736,1.41106448562846,1.13099932196708,0.988779870937496,1.87979163995885,0.884610551949874,0.647067399789637,0.883366073841574,1.93950101254089,7.45567044872489,1.46390398505774,2.30391377494801,1.02182822083437,0.359445373517761,0,0.508280908292259,1.19832511523858,0.457500602818626,2.01046963380583,1.73824320192276,0.767146371990992,0.62336413367868,0.648965052271031,1.2220723662038,1.24406970610093,1.76905930903572,3.36706969418358,5.33493816147085,2.75882525320168,3.06105620669094,3.46621081022145,5.57899293040888,6.53379973452734,5.71580519814346,3.88055056108524,2.58681591519411,2.26927296201383,2.11141348996739,0.657587197282725,2.50242524303038,2.43776516565517,2.88094990971121,3.38358253591438,0,0.257347907114715,0.568326998791185,0.621377317606506,0.703578179943289,1.80062061461015,1.42046841351126,2.16440654922144,1.3884040159864,1.16266972375204,1.60964040839772,2.56883753207773,1.6455984991348,2.95501435342371,1.37816976227955,1.02339991197733,1.3173006917463,1.74468344388483,0.841159794256509,1.54356918568927,2.64335026387038,0.793351699990633,0.853153002140936,3.48355007790658,1.80414445850931,0.80673409849337,0.22237804384487,0.570676878337677,1.42358718463353,0.988193728344065,1.25667604400135,2.18852119245266,1.16978452271472,2.69645822596266,1.72910439899755,0.796565093017469,1.13800740571849,1.71372768914593,1.1270773567308,1.4255592949172,0.969762435838129,1.33258057791605,1.13825766823663,0.295220295959204,0.627994911365499,0.740382983530803,0.592905254174298,0.500535317148282,0.786235980452812,0.674586337154561,1.01430060694251,1.4470629585145,0.50925170356284,0.863088412352432,1.62135226775035,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.717589654087649,0,1.29327233116623,1.89491411770485,1.30371981153621,1.52770577197669,0.938760993154008,1.17254380209271,1.6663054862021,2.34160377429359,2.99506773801763,1.55025282754142,2.39182152986231,2.13022309130459,2.07221978239075,1.44649058581512,0,0,0,0.827810238914197,1.60550589987792,1.99259867206745,1.47541450839008,1.26235463602186,1.57754109708128,1.17131623288992,2.15423397732799,2.62865677747807,2.00518806674155,1.41538265394416,1.21443210502468,1.46127928955656,3.16230222357219,1.28528526568723,1.13552068166615,1.42452482933804,1.79175655288934,1.15479086080775,1.32745138339963,0.242780636154981,0.906970670894253,0.565815239267694,1.18120757152309,0.614870295887855,0.775284879504663,0.363533729477506,1.42598951353889,0,0,0,1.36175842301515,3.6012218806262,2.32845630808958,1.28602221018955,3.19212420556092,1.42695054081656,1.31639216481697,2.43571959291679,0.469343416127421,1.0591603543191,1.32317038832977,0.65954501176592,2.26050197374268,1.74907482291652,1.90995750405018,0.492422699235184,2.04036585640896,1.8542530201051,0.512612642393558,1.65109494370578,1.85194527369712,2.0720530270516,0.683471138605126,1.14389086603261,0.849892149969277,0.979660166265606,0.414599921413271,0.954670618015114,2.53068794864908,0.813277868507395,1.51207477150522,1.46361807210128,1.52853794622324,2.69728692769641,1.48776220305605,1.04702376793612,2.46268449254406,0,0,0.897099276263873,1.15820943319968,0.972255941720238,1.54991788173277,1.520605129417,1.5256441023948,0.651021924219751,0.524296722128554,0.724752362478018,0.288030006257865,0.632022241256357,0,0.821687657318618,0.389762468933385,0.716106782669926,1.78813219303138,0.360586348559907,0.738447635872886,0.605798699688886,0.533447646584999,0.302478555410522,0.974578807397524,0.865906574762965,1.05189211963412,5.21479882314986,0,0.0897138566094757,0.335769232728157,0.772758376128762,1.31377732815827,0.915758121336325,1.71494703263253,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,2.70009000092722,1.80128481289688,0.453142408984205,0,3.00983307994112,3.99024873401031,3.24393850932855,1.70174701947806,1.46729213839588,0.551530525350042,1.33348036680969,1.23621034343337,1.92551525755089,2.52697211763797,0.760437899670719,0.943131706930381,2.06011316433741,1.47257850531199,1.55075766180156,3.33405583898152,2.54945517078682,1.92909220463705,1.64834360321323,1.32479028120958,1.02860775715625,2.12970967391205,2.14592570952589,0.726732083161643,2.25862512996793,1.52306294205018,0.914639864363863,1.31534855718921,1.22223702461276,1.68342681497322,2.25406534435931,1.18205378850676,2.04615521584845,1.23949472948773,1.92906610981141,2.24829520144151,1.63752125911786,1.93383948643468,1.72159498861959,1.10295709559758,3.01428186306548
|phase1_expression=1.92178616525753,1.74487703819681,0.909998478779072,1.81478526784098,1.50268718983904,0.503637815735669,1.16806320297763,0.387369970324729,0.422366166455,0.468129052643987,0.171217968225505,0.398860794976682,0.342401459862411,0.0874204024189974,0.999329285446988,0.607425802169478,0.699561878128147,0.630924330716475,0.685572168028694,1.27316895539409,0.680346321208558,0.893618560807968,1.30599894569468,1.43993180514066,0.91763712426868,1.14846392823004,1.29228598847722,0.646413698057667,1.14014051673824,1.00812051903972,0.443461021310609,0.635030673459631,0,0,0,0.166234645358492,0.204169356262369,3.34825304589526,0.7813353445238,2.61761871986899,3.52938892818609,1.36609096991689,1.45653105909346,3.39921408534059,3.85232338634155,3.67093504323363,0,0,0.439372365468944,0.58328969722285,0.55994568650145,0,1.17447824240415,2.17608642603403,0,0.257259436035947,0.85960031981627,1.03134418455488,2.02316460859598,4.7609188134483,1.90149421051854,0,0,0,0,0,0,0,1.97010263386108,1.4850653216486,1.89292465216244,0.856952953211411,0.662605622854841,2.44981598429908,2.01275489138296,0.919218786610021,1.10115880999389,0.766124028511126,0.614426133024974,3.82470234417562,3.20206752608434,5.73004707612436,0.558365998002762,1.68828783009504,0.45839474333043,1.17851434189467,0.996601765593721,0.559198337475902,0.530083353332288,1.43585964202892,1.73918693221007,0,0,0,0.649776417447669,0.448026887097336,0.421333260395256,1.70430322578058,0.259786004602869,0.70667914902068,1.83096445709685,0,0,0,1.08245520505607,2.53359865475099,0.505524445014783,0.91347103775248,0.517875767294343,0.742210695324124,1.90833859442749,1.52232739156071,1.15307748628029,1.3565037649736,1.41106448562846,1.13099932196708,0.988779870937496,1.87979163995885,0.884610551949874,0.647067399789637,0.883366073841574,1.93950101254089,7.45567044872489,1.46390398505774,2.30391377494801,1.02182822083437,0.359445373517761,0,0.508280908292259,1.19832511523858,0.457500602818626,2.01046963380583,1.73824320192276,0.767146371990992,0.62336413367868,0.648965052271031,1.2220723662038,1.24406970610093,1.76905930903572,3.36706969418358,5.33493816147085,2.75882525320168,3.06105620669094,3.46621081022145,5.57899293040888,6.53379973452734,5.71580519814346,3.88055056108524,2.58681591519411,2.26927296201383,2.11141348996739,0.657587197282725,2.50242524303038,2.43776516565517,2.88094990971121,3.38358253591438,0,0.257347907114715,0.568326998791185,0.621377317606506,0.703578179943289,1.80062061461015,1.42046841351126,2.16440654922144,1.3884040159864,1.16266972375204,1.60964040839772,2.56883753207773,1.6455984991348,2.95501435342371,1.37816976227955,1.02339991197733,1.3173006917463,1.74468344388483,0.841159794256509,1.54356918568927,2.64335026387038,0.793351699990633,0.853153002140936,3.48355007790658,1.80414445850931,0.80673409849337,0.22237804384487,0.570676878337677,1.42358718463353,0.988193728344065,1.25667604400135,2.18852119245266,1.16978452271472,2.69645822596266,1.72910439899755,0.796565093017469,1.13800740571849,1.71372768914593,1.1270773567308,1.4255592949172,0.969762435838129,1.33258057791605,1.13825766823663,0.295220295959204,0.627994911365499,0.740382983530803,0.592905254174298,0.500535317148282,0.786235980452812,0.674586337154561,1.01430060694251,1.4470629585145,0.50925170356284,0.863088412352432,1.62135226775035,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.717589654087649,0,1.29327233116623,1.89491411770485,1.30371981153621,1.52770577197669,0.938760993154008,1.17254380209271,1.6663054862021,2.34160377429359,2.99506773801763,1.55025282754142,2.39182152986231,2.13022309130459,2.07221978239075,1.44649058581512,0,0,0,0.827810238914197,1.60550589987792,1.99259867206745,1.47541450839008,1.26235463602186,1.57754109708128,1.17131623288992,2.15423397732799,2.62865677747807,2.00518806674155,1.41538265394416,1.21443210502468,1.46127928955656,3.16230222357219,1.28528526568723,1.13552068166615,1.42452482933804,1.79175655288934,1.15479086080775,1.32745138339963,0.242780636154981,0.906970670894253,0.565815239267694,1.18120757152309,0.614870295887855,0.775284879504663,0.363533729477506,1.42598951353889,0,0,0,1.36175842301515,3.6012218806262,2.32845630808958,1.28602221018955,3.19212420556092,1.42695054081656,1.31639216481697,2.43571959291679,0.469343416127421,1.0591603543191,1.32317038832977,0.65954501176592,2.26050197374268,1.74907482291652,1.90995750405018,0.492422699235184,2.04036585640896,1.8542530201051,0.512612642393558,1.65109494370578,1.85194527369712,2.0720530270516,0.683471138605126,1.14389086603261,0.849892149969277,0.979660166265606,0.414599921413271,0.954670618015114,2.53068794864908,0.813277868507395,1.51207477150522,1.46361807210128,1.52853794622324,2.69728692769641,1.48776220305605,1.04702376793612,2.46268449254406,0,0,0.897099276263873,1.15820943319968,0.972255941720238,1.54991788173277,1.520605129417,1.5256441023948,0.651021924219751,0.524296722128554,0.724752362478018,0.288030006257865,0.632022241256357,0,0.821687657318618,0.389762468933385,0.716106782669926,1.78813219303138,0.360586348559907,0.738447635872886,0.605798699688886,0.533447646584999,0.302478555410522,0.974578807397524,0.865906574762965,1.05189211963412,5.21479882314986,0,0.0897138566094757,0.335769232728157,0.772758376128762,1.31377732815827,0.915758121336325,1.71494703263253,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,2.70009000092722,1.80128481289688,0.453142408984205,0,3.00983307994112,3.99024873401031,3.24393850932855,1.70174701947806,1.46729213839588,0.551530525350042,1.33348036680969,1.23621034343337,1.92551525755089,2.52697211763797,0.760437899670719,0.943131706930381,2.06011316433741,1.47257850531199,1.55075766180156,3.33405583898152,2.54945517078682,1.92909220463705,1.64834360321323,1.32479028120958,1.02860775715625,2.12970967391205,2.14592570952589,0.726732083161643,2.25862512996793,1.52306294205018,0.914639864363863,1.31534855718921,1.22223702461276,1.68342681497322,2.25406534435931,1.18205378850676,2.04615521584845,1.23949472948773,1.92906610981141,2.24829520144151,1.63752125911786,1.93383948643468,1.72159498861959,1.10295709559758,3.01428186306548
|short_description=p2@Clasp1
}}
}}

Revision as of 05:39, 18 April 2012

Short description:p2@Clasp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Clasp1_5end
Coexpression cluster:NA
Association with transcript: 410bp_to_ENSMUST00000049404, ENSMUST00000070989, ENSMUST00000165223, NM_001081276, NM_029709, NM_177548, uc007cid.1, uc007cie.1, uc007cif.1, uc007cii.2, uc007cij.2, uc011wqm.1, uc011wqn.1_5end
EntrezGene:Clasp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Clasp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.85
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.67
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C65.33
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C65.58
eyeball, neonate N01.CNhs11140.1532-43E76.53
eyeball, neonate N02.CNhs11205.1551-44G85.72
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E32.57
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G11.38
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B82.70
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I83.01
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:120286045..120286058,%2B&oldid=829844"