Personal tools

FFCP PHASE1:Mm9::chr2:152223881..152223933,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr2:152223881..152223933,-
|short_description=p3@Sox12
|description=CAGE_peak_3_at_Sox12_5end
|association_with_transcript=-99bp_to_ENSMUST00000063332,NM_011438,uc008nfi.1_5end
|EntrezGene=20667
|EntrezGene=20667
|HGNC=
|HGNC=
|UniProt=Q04890
|UniProt=Q04890
|association_with_transcript=-99bp_to_ENSMUST00000063332,NM_011438,uc008nfi.1_5end
|description=CAGE_peak_3_at_Sox12_5end
|id=chr2:152223881..152223933,-
|ontology_enrichment_disease=
|phase1_expression=4.48416771893423,0,0,0,1.00179145989269,0.16787927191189,0,0.645616617207881,0,0,0.513653904676515,0.319088635981346,0.171200729931206,0.34968160967599,0.333109761815663,1.01237633694913,2.79824751251259,0.788655413395594,0.274228867211478,1.27316895539409,1.19060606211498,0.695036658406197,0.261199789138935,0,0,0,0,0,0.380046838912748,0,0,1.90509202037889,6.76571266343027,0,1.44425809875637,0.664938581433969,1.02084678131185,0,0,0,0,0,0,1.1330713617802,1.31790010585369,0.734187008646726,7.82391344348039,3.05235218932625,1.75748946187577,2.52758868796568,1.1198913730029,2.87505128729943,0.167782606057736,0.725362142011344,0,0.514518872071894,2.57880095944881,0,18.0061650165042,22.2176211294254,17.1134478946668,2.37191172448392,4.4464739805557,0,0,0,3.29560121570245,4.2264013585371,20.0120951755362,20.6559085647487,19.1395714829758,3.99911378165325,3.75476519617743,17.2712026893085,18.0189485514284,18.3843757322004,3.30347642998166,0.638436690425939,1.99688493233117,17.013331117195,13.5401712531566,13.022834263919,1.3959149950069,0.56276261003168,1.06958773443767,7.07108605136802,4.55589378557129,10.9975673036927,0.454357159999104,0.831287161174641,0.869593466105033,1.72084775396277,0,0,0.649776417447669,0.896053774194671,0.983110940922263,0,0,0,5.49289337129054,0,0,0,0.216491041011214,0.253359865475099,0,0.5709193985953,0,1.7813056687779,5.03107447621794,5.48037860961854,3.92046345335299,3.16517545160507,5.76184664964954,2.76466500925286,1.23597483867187,1.15679485535929,2.65383165584962,4.04417124868523,1.98757366614354,1.45462575940567,0,2.04946557908083,0.83778682725382,0.510914110417183,0.838705871541442,0.599902730993408,0.889491589511453,1.19832511523858,3.66000482254901,19.9790419859454,2.25971616249959,3.06858548796397,1.66230435647648,1.94689515681309,11.915205570487,1.8661045591514,0.252722758433675,1.05220927943237,5.59517904739626,8.27647575960503,8.46292010085141,6.17889753126432,8.300452896462,7.94305065766069,7.02762934197966,3.3631438196072,10.993967639575,10.2117283290622,8.44565395986955,7.67185063496512,5.28289773528636,3.48252166522167,3.08673204611915,7.76233640592123,0,1.02939162845886,0.284163499395593,7.87077935634907,6.0976775595085,4.68161359798639,11.1270025725049,8.26409773339096,5.707883176833,7.90615412151387,9.38956904898667,8.99093136227205,8.3925523455875,3.447516745661,6.80978000185188,4.67839959761063,4.61055242111206,4.83143107537338,1.89260953707715,21.4041593748912,0.660837565967596,0,4.47905326123991,6.0381534683714,4.38149368495117,3.22693639397348,2.2237804384487,2.28270751335071,0,1.64698954724011,1.50801125280162,3.18330355265841,2.14460495831032,0,0.648414149624083,0.398282546508734,8.53505554288868,4.91268604221834,4.50830942692322,4.88763186828754,4.65485969202302,8.6968416663995,3.03535378196435,1.62371162777562,1.41298855057237,1.35736880313981,0.592905254174298,2.16898637430922,1.76903095601883,1.12431056192427,0.405720242777006,2.17059443777175,0.763877555344259,0.863088412352432,1.94562272130042,0.823684239564244,1.43768206527355,0.744281895337007,0.624075346229121,1.26289438973556,0.358794827043824,1.4473305640901,0.923765950833023,4.35830247072115,5.0519142697028,4.2436271443797,3.28566347603903,4.69017520837084,5.47500374037832,5.46374214001837,3.62560831444239,4.65075848262427,5.26200736569707,1.14704320301017,1.38147985492716,1.73578870297814,0,0,0.983528546038072,1.65562047782839,1.12385412991454,1.17211686592203,2.95082901678016,1.51482556322624,1.26203287766503,1.56175497718655,4.30846795465598,4.77937595905104,4.67877215573028,4.24614796183249,2.02405350837447,4.09158201075837,5.92931666919785,3.85585579706168,4.40014264145633,9.79360820169904,15.4742611385897,3.46437258242324,1.32745138339963,4.61283208694465,2.41858845571801,1.88605079755898,3.54362271456927,3.07435147943927,3.10113951801865,2.18120237686503,2.85197902707777,0.948110273807448,3.16255825724996,1.03135543248187,0.340439605753788,5.94201610303324,7.1147276080515,5.78709994585299,5.67488747655275,5.88617098086833,4.77192159746151,13.3964577610424,0.469343416127421,0.63549621259146,0.882113592219848,0.8244312647074,5.9741837877485,2.89502039655148,2.38744688006273,1.80554989719567,1.7488850197791,1.29797711407357,1.36696704638282,5.77883230297023,5.00025223898222,1.69531611304222,1.50363650493128,1.37266903923914,1.86976272993241,2.09927178485487,2.07299960706636,0,7.75023184273782,5.28630614529807,2.26811215725783,3.97267762427491,1.9652630737156,2.42755823492677,3.55409859618945,1.30877970992015,1.03691978633434,0.621339313086926,0.56369293868419,8.37292657846281,6.12196414691261,7.00024278038572,8.65370817300798,5.06868376472335,11.3836521486381,7.16124116641726,5.87212328783981,2.17425708743405,0.288030006257865,1.58005560314089,5.47358081283443,2.05421914329655,1.68897069871134,1.07416017400489,0.596044064343795,1.08175904567972,0.443068581523732,1.21159739937777,1.143102099825,0.806609481094724,0.292373642219257,0.769694733122636,1.40252282617883,0.906921534460845,1.10992976687032,0.807424709485281,0.839423081820392,1.9318959403219,1.12609485270709,2.74727436400898,1.50057865355346,0.501572104035363,0.564751842617067,3.68260189205742,2.86447756719698,3.26521046453006,1.37016503954128,4.5323633843382,3.37511250115903,0.900642406448441,1.81256963593682,3.62432218226274,7.05753963572401,6.78342284781753,4.26834014385335,4.37592090722929,5.44994222832754,5.1476182366004,4.00044110042907,4.12070114477788,3.53011130550997,4.04315538822076,6.59046179714623,2.82939512079114,5.99305647807247,4.86591158277006,4.88201486122713,6.19181798667996,6.2577536010222,6.17309505483856,4.12085900803307,4.71036544430071,4.80016953339582,5.6792257970988,6.43777712857767,4.50573891560218,4.32903149910521,3.04612588410035,5.3049112133104,4.47218509444333,3.80251518768413,2.24456908663095,4.1522256343461,4.82671963640261,3.27384834535751,3.09873682371932,3.08650577569826,9.242991383704,3.27504251823572,5.58664740525576,6.31251495827183,2.8676884485537,3.01428186306548
|phase1_expression=4.48416771893423,0,0,0,1.00179145989269,0.16787927191189,0,0.645616617207881,0,0,0.513653904676515,0.319088635981346,0.171200729931206,0.34968160967599,0.333109761815663,1.01237633694913,2.79824751251259,0.788655413395594,0.274228867211478,1.27316895539409,1.19060606211498,0.695036658406197,0.261199789138935,0,0,0,0,0,0.380046838912748,0,0,1.90509202037889,6.76571266343027,0,1.44425809875637,0.664938581433969,1.02084678131185,0,0,0,0,0,0,1.1330713617802,1.31790010585369,0.734187008646726,7.82391344348039,3.05235218932625,1.75748946187577,2.52758868796568,1.1198913730029,2.87505128729943,0.167782606057736,0.725362142011344,0,0.514518872071894,2.57880095944881,0,18.0061650165042,22.2176211294254,17.1134478946668,2.37191172448392,4.4464739805557,0,0,0,3.29560121570245,4.2264013585371,20.0120951755362,20.6559085647487,19.1395714829758,3.99911378165325,3.75476519617743,17.2712026893085,18.0189485514284,18.3843757322004,3.30347642998166,0.638436690425939,1.99688493233117,17.013331117195,13.5401712531566,13.022834263919,1.3959149950069,0.56276261003168,1.06958773443767,7.07108605136802,4.55589378557129,10.9975673036927,0.454357159999104,0.831287161174641,0.869593466105033,1.72084775396277,0,0,0.649776417447669,0.896053774194671,0.983110940922263,0,0,0,5.49289337129054,0,0,0,0.216491041011214,0.253359865475099,0,0.5709193985953,0,1.7813056687779,5.03107447621794,5.48037860961854,3.92046345335299,3.16517545160507,5.76184664964954,2.76466500925286,1.23597483867187,1.15679485535929,2.65383165584962,4.04417124868523,1.98757366614354,1.45462575940567,0,2.04946557908083,0.83778682725382,0.510914110417183,0.838705871541442,0.599902730993408,0.889491589511453,1.19832511523858,3.66000482254901,19.9790419859454,2.25971616249959,3.06858548796397,1.66230435647648,1.94689515681309,11.915205570487,1.8661045591514,0.252722758433675,1.05220927943237,5.59517904739626,8.27647575960503,8.46292010085141,6.17889753126432,8.300452896462,7.94305065766069,7.02762934197966,3.3631438196072,10.993967639575,10.2117283290622,8.44565395986955,7.67185063496512,5.28289773528636,3.48252166522167,3.08673204611915,7.76233640592123,0,1.02939162845886,0.284163499395593,7.87077935634907,6.0976775595085,4.68161359798639,11.1270025725049,8.26409773339096,5.707883176833,7.90615412151387,9.38956904898667,8.99093136227205,8.3925523455875,3.447516745661,6.80978000185188,4.67839959761063,4.61055242111206,4.83143107537338,1.89260953707715,21.4041593748912,0.660837565967596,0,4.47905326123991,6.0381534683714,4.38149368495117,3.22693639397348,2.2237804384487,2.28270751335071,0,1.64698954724011,1.50801125280162,3.18330355265841,2.14460495831032,0,0.648414149624083,0.398282546508734,8.53505554288868,4.91268604221834,4.50830942692322,4.88763186828754,4.65485969202302,8.6968416663995,3.03535378196435,1.62371162777562,1.41298855057237,1.35736880313981,0.592905254174298,2.16898637430922,1.76903095601883,1.12431056192427,0.405720242777006,2.17059443777175,0.763877555344259,0.863088412352432,1.94562272130042,0.823684239564244,1.43768206527355,0.744281895337007,0.624075346229121,1.26289438973556,0.358794827043824,1.4473305640901,0.923765950833023,4.35830247072115,5.0519142697028,4.2436271443797,3.28566347603903,4.69017520837084,5.47500374037832,5.46374214001837,3.62560831444239,4.65075848262427,5.26200736569707,1.14704320301017,1.38147985492716,1.73578870297814,0,0,0.983528546038072,1.65562047782839,1.12385412991454,1.17211686592203,2.95082901678016,1.51482556322624,1.26203287766503,1.56175497718655,4.30846795465598,4.77937595905104,4.67877215573028,4.24614796183249,2.02405350837447,4.09158201075837,5.92931666919785,3.85585579706168,4.40014264145633,9.79360820169904,15.4742611385897,3.46437258242324,1.32745138339963,4.61283208694465,2.41858845571801,1.88605079755898,3.54362271456927,3.07435147943927,3.10113951801865,2.18120237686503,2.85197902707777,0.948110273807448,3.16255825724996,1.03135543248187,0.340439605753788,5.94201610303324,7.1147276080515,5.78709994585299,5.67488747655275,5.88617098086833,4.77192159746151,13.3964577610424,0.469343416127421,0.63549621259146,0.882113592219848,0.8244312647074,5.9741837877485,2.89502039655148,2.38744688006273,1.80554989719567,1.7488850197791,1.29797711407357,1.36696704638282,5.77883230297023,5.00025223898222,1.69531611304222,1.50363650493128,1.37266903923914,1.86976272993241,2.09927178485487,2.07299960706636,0,7.75023184273782,5.28630614529807,2.26811215725783,3.97267762427491,1.9652630737156,2.42755823492677,3.55409859618945,1.30877970992015,1.03691978633434,0.621339313086926,0.56369293868419,8.37292657846281,6.12196414691261,7.00024278038572,8.65370817300798,5.06868376472335,11.3836521486381,7.16124116641726,5.87212328783981,2.17425708743405,0.288030006257865,1.58005560314089,5.47358081283443,2.05421914329655,1.68897069871134,1.07416017400489,0.596044064343795,1.08175904567972,0.443068581523732,1.21159739937777,1.143102099825,0.806609481094724,0.292373642219257,0.769694733122636,1.40252282617883,0.906921534460845,1.10992976687032,0.807424709485281,0.839423081820392,1.9318959403219,1.12609485270709,2.74727436400898,1.50057865355346,0.501572104035363,0.564751842617067,3.68260189205742,2.86447756719698,3.26521046453006,1.37016503954128,4.5323633843382,3.37511250115903,0.900642406448441,1.81256963593682,3.62432218226274,7.05753963572401,6.78342284781753,4.26834014385335,4.37592090722929,5.44994222832754,5.1476182366004,4.00044110042907,4.12070114477788,3.53011130550997,4.04315538822076,6.59046179714623,2.82939512079114,5.99305647807247,4.86591158277006,4.88201486122713,6.19181798667996,6.2577536010222,6.17309505483856,4.12085900803307,4.71036544430071,4.80016953339582,5.6792257970988,6.43777712857767,4.50573891560218,4.32903149910521,3.04612588410035,5.3049112133104,4.47218509444333,3.80251518768413,2.24456908663095,4.1522256343461,4.82671963640261,3.27384834535751,3.09873682371932,3.08650577569826,9.242991383704,3.27504251823572,5.58664740525576,6.31251495827183,2.8676884485537,3.01428186306548
|short_description=p3@Sox12
}}
}}

Revision as of 08:54, 18 April 2012

Short description:p3@Sox12
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sox12_5end
Coexpression cluster:NA
Association with transcript: -99bp_to_ENSMUST00000063332, NM_011438, uc008nfi.1_5end
EntrezGene:Sox12
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Sox12

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C318.01
Mouse Granule cells, donor2.CNhs12357.11731-123E322.22
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.66
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D919.14
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.02
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.54
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C15.76
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F54.04
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F119.98
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C65.60
eyeball, embryo E14.CNhs10521.399-16E28.28
eyeball, embryo E15.CNhs10593.426-16C98.46
eyeball, embryo E17.CNhs11023.1261-18D46.18
eyeball, neonate N00.CNhs11207.633-15C68.30
eyeball, neonate N01.CNhs11140.1532-43E77.94
eyeball, neonate N02.CNhs11205.1551-44G87.03
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E210.99
forelimb, embryo E12.CNhs10600.359-14H210.21
forelimb, embryo E13.CNhs10589.384-1E28.45
forelimb, embryo E14.CNhs10577.413-26A87.67
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I67.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E97.87
heart, embryo E12.CNhs11015.353-12F56.10
heart, embryo E13.CNhs11013.376-3I94.68
heart, embryo E14.CNhs10597.403-26D411.13
heart, embryo E15.CNhs11017.431-16C88.26
heart, embryo E16.CNhs11021.457-17C65.71
heart, embryo E17.CNhs11025.479-18E57.91
heart, embryo E18.CNhs11030.1283-20G39.39
heart, neonate N00.CNhs11213.639-21E38.99
heart, neonate N03.CNhs11221.1349-25I28.39
heart, neonate N10.CNhs11118.749-24G13.45
heart, neonate N16.CNhs11209.782-15G16.81
heart, neonate N20.CNhs11127.821-26I64.68
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D24.83
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G121.40
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I54.48
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D84.38
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I98.54
kidney, embryo E15.CNhs10997.434-16F84.91
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I24.89
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G78.70
kidney, neonate N10.CNhs11206.758-6D53.04
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G24.36
lung, embryo E14.CNhs10604.404-26F85.05
lung, embryo E15.CNhs11020.432-17C54.24
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A64.69
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C65.46
lung, neonate N06.CNhs11212.683-20E53.63
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E65.26
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I74.40
ovary, embryo E18.CNhs11040.505-44H79.79
ovary, neonate N00.CNhs11217.1299-22I415.47
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E65.94
pituitary gland, embryo E13.CNhs11009.370-44C77.11
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F65.89
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E913.40
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G45.97
skin, neonate N03.CNhs11215.662-22H32.90
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C15.78
spleen, embryo E18.CNhs11011.1271-21F25.00
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E37.75
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A93.55
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F58.37
testis, embryo E15.CNhs11034.443-27C56.12
testis, embryo E16.CNhs11033.470-26G57.00
testis, embryo E17.CNhs11029.486-18I58.65
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B711.38
testis, neonate N07.CNhs11222.726-26I47.16
testis, neonate N10.CNhs11204.763-44D95.87
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I87.06
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F25.15
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.99
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.88
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I59.24
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C66.31
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:152223881..152223933,-&oldid=855234"