Personal tools

FFCP PHASE1:Mm9::chr3:130813200..130813252,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:130813200..130813252,+
|short_description=p1@Lef1
|description=CAGE_peak_1_at_Lef1_5end
|association_with_transcript=-136bp_to_ENSMUST00000029611,ENSMUST00000066849,ENSMUST00000106341,NM_010703,uc008rjf.1,uc008rjg.1_5end
|EntrezGene=16842
|EntrezGene=16842
|HGNC=
|HGNC=
|UniProt=P27782,D3Z654,Q8BGZ9,Q3TYB0
|UniProt=P27782,D3Z654,Q8BGZ9,Q3TYB0
|association_with_transcript=-136bp_to_ENSMUST00000029611,ENSMUST00000066849,ENSMUST00000106341,NM_010703,uc008rjf.1,uc008rjg.1_5end
|description=CAGE_peak_1_at_Lef1_5end
|id=chr3:130813200..130813252,+
|ontology_enrichment_disease=
|phase1_expression=24.9832201483479,0,0,0,0,0,0.467225281191051,43.9019299701359,59.97599563661,89.8807781076455,4.79410311031414,3.11111420081812,102.035635038999,129.382195580116,1.33243904726265,2.22722794128809,0.699561878128147,5.67831897644828,9.04955261797876,4.66828616977833,8.07911256435163,0,0,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.577703239502549,0.831173226792462,0.408338712524738,0,0,0,2.35292595212406,0,0.485510353031154,0.251793635951155,0.304130793658544,0.550640256485045,0,0,1.5378032791413,0.777719596297134,0.279972843250725,0,0.167782606057736,112.431132011758,117.968923499005,0,0.85960031981627,0,42.4864567805155,50.7831340101152,41.8328726314078,0,0.889294796111139,0,0,1.4209602298922,0.898800331555214,0.384218305321555,7.36196247390191,6.07526722492608,5.46844899513593,2.28520787523043,2.42955395046775,2.08234358665422,3.45043695665651,2.75765635983006,16.5173821499083,24.7713435885264,17.3575382579555,22.6844414895933,30.0079471015904,18.7528813400434,5.58365998002762,3.93933827022176,7.18151764551008,5.59794312399969,5.12538050876771,3.72798891650601,0.530083353332288,0.226714680320357,0.289864488701678,0.860423876981386,0,0,0,0,5.05599912474307,0.681721290312231,0.519572009205738,0.35333957451034,1.40843419776681,1.28326477414318,5.09610479413291,0,0,0,0,4.79572294820052,17.0899003207133,12.6175818205101,5.37804512975021,5.48037860961854,3.92046345335299,3.61734337326294,3.64524992120685,6.78599593180248,0,0.86759614151947,4.42305275974937,4.85300549842228,10.8212344045593,16.4857586065976,0,7.90508151931177,2.93225389538837,0,0.479260498023681,0,0.127070227073065,21.2702707954848,10.5225138648284,2.01046963380583,8.34356736922927,6.64860189058859,27.0124457927428,11.1946471516753,6.00852246716866,13.5603597965001,28.3049489445716,0.631325567659422,14.7036100547855,6.20735681970377,5.40186389416048,6.0281927134286,4.21826294738233,2.8185018462667,3.09215691047105,3.88055056108524,45.7004145017626,31.0133971475224,28.8559843628876,16.4396799320681,22.5218271872734,19.8503734917635,21.4013421864261,17.9130840136644,0,0.257347907114715,0,13.6703009873431,10.3191466391682,6.48223421259654,4.49814997611899,5.1158700254325,1.85120535464854,1.39520366850245,1.87791380979733,2.21854150497622,0.16455984991348,0.32833492815819,0.810688095458557,0.877199924551994,0.658650345873152,0.134206418760372,6.30869845692382,10.8049842998249,0,0.528901133327089,1.06644125267617,1.85789337488351,0.77320476793256,0,0,0,0.949058123089023,0.329397909448022,0.251335208800269,0.596869416123452,0.38992817423824,1.79763881730844,0.216138049874694,0,13.0870851657626,10.3966146474853,9.01661885384643,6.92414514674068,10.0855293327165,8.55657002661886,4.93244989569207,1.62371162777562,1.56998727841375,0.493588655687202,0.296452627087149,1.00107063429656,0.393117990226406,0.449724224769707,0.811440485554012,4.10001171579109,9.16653066413111,9.20627639842594,3.08056930872567,0.549122826376163,5.75072826109418,2.97712758134803,0.936113019343682,0,0.358794827043824,0,4.0645701836653,13.0749074121634,10.1038285394056,6.95954851678271,6.10194645550105,8.71032538697442,4.04674189506223,5.26860849216057,6.14777062014145,5.09368786192182,7.97273843287435,7.37384916220821,4.48980952851328,4.62876987460837,0,0,0.491764273019036,0.551873492609465,8.0275294993896,5.86058432961016,1.14754461763673,0.252470927204373,0.315508219416257,0.390438744296638,0,0.716906393857656,0.445597348164788,0,0,0.292255857911312,0,7.06906896127976,3.40656204499845,7.83488656135923,10.750539317336,10.7230579932148,0,3.64170954232472,1.209294227859,0.377210159511796,0.590603785761546,0.307435147943927,0.775284879504663,0,0.356497378384721,0.632073515871632,0,0,3.40439605753788,9.90336017172206,11.5129228566652,8.78781843629528,11.5271151867478,6.42127743367454,4.11372551505302,2.74018454203139,2.81606049676452,0.847328283455281,2.8668691747145,45.8383783177315,34.5533873129238,38.0574556296663,50.9719908893393,70.2523050908862,0.582961673259701,8.71498919449395,3.2465467351592,2.88941615148511,3.88908507476395,3.20226376907975,5.74115756428306,5.94823250336959,1.69978429993855,2.51912614182584,4.69879910935041,0,3.47969592939249,1.21991680276109,0.648032044930808,0.836353184057875,0,0.134864346384821,0.495920734352016,0.26175594198403,0.259229946583586,1.24267862617385,0,8.37292657846281,4.13646226142744,2.33341426012857,1.54991788173277,3.21016638432478,0.938857909166032,2.47388331203505,0.734015410979976,0.966336483304024,1.72818003754719,106.179736531068,20.2725215290164,57.2100031408088,111.472066114948,116.54637887953,136.69277208951,105.771995577573,119.185448429884,88.5475766045255,101.736086884425,106.57327768964,109.250284309262,112.183007352624,112.669333703032,11.1097887971454,0.443971906748129,0.269141569828427,0.167884616364078,2.31827512838629,0.187682475451182,3.6630324853453,1.50057865355346,2.00628841614145,3.3885110557024,3.68260189205742,4.58316410751517,4.81188910562325,2.74033007908257,2.2661816921691,4.05013500139084,1.80128481289688,1.35942722695261,2.5888015587591,21.6915556450929,28.3307660114732,14.6830900948555,10.2104821168684,6.28839487883947,10.8467669985508,8.22312892865976,9.27157757575024,9.62757628775446,9.34979683526051,9.12525479604863,10.1858224348481,9.45779225445812,9.53974770832552,10.7978681636553,7.62069906052918,9.03897742369873,10.6100071255038,12.3625770240992,11.7759136107518,7.88599280486455,9.40621772644489,9.77588378784016,7.99405291477807,8.65806299821042,9.13837765230106,9.51225458938417,8.41823076601097,8.41985505844343,10.661703161497,9.25353141368558,8.0773675547962,10.6400071224119,8.05671574167023,10.0311437710194,17.9863616115321,8.4215379040347,8.37997110788363,7.26895661861605,8.82365676478062,5.79669589051054
|phase1_expression=24.9832201483479,0,0,0,0,0,0.467225281191051,43.9019299701359,59.97599563661,89.8807781076455,4.79410311031414,3.11111420081812,102.035635038999,129.382195580116,1.33243904726265,2.22722794128809,0.699561878128147,5.67831897644828,9.04955261797876,4.66828616977833,8.07911256435163,0,0,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.577703239502549,0.831173226792462,0.408338712524738,0,0,0,2.35292595212406,0,0.485510353031154,0.251793635951155,0.304130793658544,0.550640256485045,0,0,1.5378032791413,0.777719596297134,0.279972843250725,0,0.167782606057736,112.431132011758,117.968923499005,0,0.85960031981627,0,42.4864567805155,50.7831340101152,41.8328726314078,0,0.889294796111139,0,0,1.4209602298922,0.898800331555214,0.384218305321555,7.36196247390191,6.07526722492608,5.46844899513593,2.28520787523043,2.42955395046775,2.08234358665422,3.45043695665651,2.75765635983006,16.5173821499083,24.7713435885264,17.3575382579555,22.6844414895933,30.0079471015904,18.7528813400434,5.58365998002762,3.93933827022176,7.18151764551008,5.59794312399969,5.12538050876771,3.72798891650601,0.530083353332288,0.226714680320357,0.289864488701678,0.860423876981386,0,0,0,0,5.05599912474307,0.681721290312231,0.519572009205738,0.35333957451034,1.40843419776681,1.28326477414318,5.09610479413291,0,0,0,0,4.79572294820052,17.0899003207133,12.6175818205101,5.37804512975021,5.48037860961854,3.92046345335299,3.61734337326294,3.64524992120685,6.78599593180248,0,0.86759614151947,4.42305275974937,4.85300549842228,10.8212344045593,16.4857586065976,0,7.90508151931177,2.93225389538837,0,0.479260498023681,0,0.127070227073065,21.2702707954848,10.5225138648284,2.01046963380583,8.34356736922927,6.64860189058859,27.0124457927428,11.1946471516753,6.00852246716866,13.5603597965001,28.3049489445716,0.631325567659422,14.7036100547855,6.20735681970377,5.40186389416048,6.0281927134286,4.21826294738233,2.8185018462667,3.09215691047105,3.88055056108524,45.7004145017626,31.0133971475224,28.8559843628876,16.4396799320681,22.5218271872734,19.8503734917635,21.4013421864261,17.9130840136644,0,0.257347907114715,0,13.6703009873431,10.3191466391682,6.48223421259654,4.49814997611899,5.1158700254325,1.85120535464854,1.39520366850245,1.87791380979733,2.21854150497622,0.16455984991348,0.32833492815819,0.810688095458557,0.877199924551994,0.658650345873152,0.134206418760372,6.30869845692382,10.8049842998249,0,0.528901133327089,1.06644125267617,1.85789337488351,0.77320476793256,0,0,0,0.949058123089023,0.329397909448022,0.251335208800269,0.596869416123452,0.38992817423824,1.79763881730844,0.216138049874694,0,13.0870851657626,10.3966146474853,9.01661885384643,6.92414514674068,10.0855293327165,8.55657002661886,4.93244989569207,1.62371162777562,1.56998727841375,0.493588655687202,0.296452627087149,1.00107063429656,0.393117990226406,0.449724224769707,0.811440485554012,4.10001171579109,9.16653066413111,9.20627639842594,3.08056930872567,0.549122826376163,5.75072826109418,2.97712758134803,0.936113019343682,0,0.358794827043824,0,4.0645701836653,13.0749074121634,10.1038285394056,6.95954851678271,6.10194645550105,8.71032538697442,4.04674189506223,5.26860849216057,6.14777062014145,5.09368786192182,7.97273843287435,7.37384916220821,4.48980952851328,4.62876987460837,0,0,0.491764273019036,0.551873492609465,8.0275294993896,5.86058432961016,1.14754461763673,0.252470927204373,0.315508219416257,0.390438744296638,0,0.716906393857656,0.445597348164788,0,0,0.292255857911312,0,7.06906896127976,3.40656204499845,7.83488656135923,10.750539317336,10.7230579932148,0,3.64170954232472,1.209294227859,0.377210159511796,0.590603785761546,0.307435147943927,0.775284879504663,0,0.356497378384721,0.632073515871632,0,0,3.40439605753788,9.90336017172206,11.5129228566652,8.78781843629528,11.5271151867478,6.42127743367454,4.11372551505302,2.74018454203139,2.81606049676452,0.847328283455281,2.8668691747145,45.8383783177315,34.5533873129238,38.0574556296663,50.9719908893393,70.2523050908862,0.582961673259701,8.71498919449395,3.2465467351592,2.88941615148511,3.88908507476395,3.20226376907975,5.74115756428306,5.94823250336959,1.69978429993855,2.51912614182584,4.69879910935041,0,3.47969592939249,1.21991680276109,0.648032044930808,0.836353184057875,0,0.134864346384821,0.495920734352016,0.26175594198403,0.259229946583586,1.24267862617385,0,8.37292657846281,4.13646226142744,2.33341426012857,1.54991788173277,3.21016638432478,0.938857909166032,2.47388331203505,0.734015410979976,0.966336483304024,1.72818003754719,106.179736531068,20.2725215290164,57.2100031408088,111.472066114948,116.54637887953,136.69277208951,105.771995577573,119.185448429884,88.5475766045255,101.736086884425,106.57327768964,109.250284309262,112.183007352624,112.669333703032,11.1097887971454,0.443971906748129,0.269141569828427,0.167884616364078,2.31827512838629,0.187682475451182,3.6630324853453,1.50057865355346,2.00628841614145,3.3885110557024,3.68260189205742,4.58316410751517,4.81188910562325,2.74033007908257,2.2661816921691,4.05013500139084,1.80128481289688,1.35942722695261,2.5888015587591,21.6915556450929,28.3307660114732,14.6830900948555,10.2104821168684,6.28839487883947,10.8467669985508,8.22312892865976,9.27157757575024,9.62757628775446,9.34979683526051,9.12525479604863,10.1858224348481,9.45779225445812,9.53974770832552,10.7978681636553,7.62069906052918,9.03897742369873,10.6100071255038,12.3625770240992,11.7759136107518,7.88599280486455,9.40621772644489,9.77588378784016,7.99405291477807,8.65806299821042,9.13837765230106,9.51225458938417,8.41823076601097,8.41985505844343,10.661703161497,9.25353141368558,8.0773675547962,10.6400071224119,8.05671574167023,10.0311437710194,17.9863616115321,8.4215379040347,8.37997110788363,7.26895661861605,8.82365676478062,5.79669589051054
|short_description=p1@Lef1
}}
}}

Revision as of 11:50, 18 April 2012

Short description:p1@Lef1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lef1_5end
Coexpression cluster:NA
Association with transcript: -136bp_to_ENSMUST00000029611, ENSMUST00000066849, ENSMUST00000106341, NM_010703, uc008rjf.1, uc008rjg.1_5end
EntrezGene:Lef1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lef1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E943.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E759.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F289.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4102.04
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8129.38
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.05
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9112.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1117.97
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C342.49
Mouse Granule cells, donor2.CNhs12357.11731-123E350.78
Mouse Granule cells, donor3.CNhs12108.11636-122C741.83
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.36
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.68
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F430.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.75
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.80
accessory axillary lymph node, adult.CNhs10475.1063-29H917.09
adrenal gland, adult.CNhs10508.49-24D712.62
adrenal gland, embryo E14.CNhs11038.406-44C55.38
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F53.62
adrenal gland, neonate N00.CNhs11191.1311-23C13.65
adrenal gland, neonate N25.CNhs11223.1377-27I36.79
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F54.85
bone (os femoris), neonate N16.CNhs11225.1525-43A610.82
bone (os femoris), neonate N20.CNhs11195.1350-25C316.49
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A421.27
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D58.34
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F227.01
diencephalon, neonate N30.CNhs11201.1388-42B211.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.56
epididymis, adult.CNhs10490.58-23B228.30
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C614.70
eyeball, embryo E14.CNhs10521.399-16E26.21
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D46.03
eyeball, neonate N00.CNhs11207.633-15C64.22
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G83.09
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E245.70
forelimb, embryo E12.CNhs10600.359-14H231.01
forelimb, embryo E13.CNhs10589.384-1E228.86
forelimb, embryo E14.CNhs10577.413-26A816.44
forelimb, embryo E15.CNhs11007.437-20E722.52
forelimb, embryo E17.CNhs10598.1517-43C419.85
forelimb, embryo E18.CNhs11008.1520-43B521.40
gonad, embryo E13.CNhs11044.1564-45I617.91
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E913.67
heart, embryo E12.CNhs11015.353-12F510.32
heart, embryo E13.CNhs11013.376-3I96.48
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C85.12
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G110.80
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I913.09
kidney, embryo E15.CNhs10997.434-16F810.40
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I26.92
kidney, embryo E18.CNhs11001.1288-20C710.09
kidney, neonate N00.CNhs11214.646-21G78.56
kidney, neonate N10.CNhs11206.758-6D54.93
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A39.17
liver, embryo E18.CNhs10579.499-43G49.21
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G213.07
lung, embryo E14.CNhs10604.404-26F810.10
lung, embryo E15.CNhs11020.432-17C56.96
lung, embryo E16.CNhs10998.458-17B66.10
lung, embryo E17.CNhs10605.480-44A68.71
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E56.15
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E67.97
lung, neonate N20.CNhs11109.822-18A47.37
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H24.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C28.03
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H77.83
ovary, neonate N00.CNhs11217.1299-22I410.75
oviduct, adult pregnant day01.CNhs10500.988-6G610.72
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E69.90
pituitary gland, embryo E13.CNhs11009.370-44C711.51
pituitary gland, embryo E14.CNhs11037.398-44A58.79
pituitary gland, embryo E15.CNhs10592.427-16B911.53
pituitary gland, embryo E16.CNhs11036.449-43F66.42
pituitary gland, embryo E17.CNhs11039.1265-44F54.11
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C345.84
skin, neonate N00.CNhs11124.650-25G434.55
skin, neonate N03.CNhs11215.662-22H338.06
skin, neonate N06.CNhs11097.693-20I550.97
skin, neonate N10.CNhs11108.762-6C470.25
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C98.71
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F23.89
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H15.74
spleen, neonate N25.CNhs11099.1354-25G35.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.70
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.48
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F58.37
testis, embryo E15.CNhs11034.443-27C54.14
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B5106.18
thymus, embryo E14.CNhs11041.402-44I420.27
thymus, embryo E15.CNhs11005.430-45I257.21
thymus, embryo E16.CNhs11002.456-26C5111.47
thymus, embryo E17.CNhs10581.478-18C1116.55
thymus, embryo E18.CNhs10595.1273-19G4136.69
thymus, neonate N02.CNhs11181.1541-43F8105.77
thymus, neonate N03.CNhs11137.2104-43C7119.19
thymus, neonate N06.CNhs11197.681-26C488.55
thymus, neonate N07.CNhs11211.713-19D3101.74
thymus, neonate N10.CNhs11194.748-24E4106.57
thymus, neonate N20.CNhs11186.820-7A2109.25
thymus, neonate N25.CNhs11125.1362-25G7112.18
thymus, neonate N30.CNhs11132.1393-42G2112.67
tongue, adult.CNhs10499.32-1B411.11
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I821.69
whole body, embryo E12.CNhs10587.857-27C928.33
whole body, embryo E13.CNhs10512.372-23H214.68
whole body, embryo E14.5.CNhs10578.420-27D210.21
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F210.85
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.14
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.06
whole body, embryo E17.5.CNhs10513.490-9F910.03
whole body, embryo E17.CNhs10517.475-3I517.99
whole body, embryo E18.CNhs10516.493-3B38.42
whole body, neonate N00.CNhs10525.657-19C28.38
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D18.82
whole body, neonate N10.CNhs10518.761-6B45.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:130813200..130813252,%2B&oldid=878839"