Personal tools

FFCP PHASE1:Mm9::chr4:115747605..115747622,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:115747605..115747622,-
|short_description=p2@Uqcrh
|description=CAGE_peak_2_at_Uqcrh_5end
|association_with_transcript=13bp_to_ENSMUST00000050580_5end
|EntrezGene=66576
|EntrezGene=66576
|HGNC=
|HGNC=
|UniProt=Q9D2Q7
|UniProt=Q9D2Q7
|association_with_transcript=13bp_to_ENSMUST00000050580_5end
|description=CAGE_peak_2_at_Uqcrh_5end
|id=chr4:115747605..115747622,-
|ontology_enrichment_disease=
|phase1_expression=11.69086583865,84.103073241086,104.194825820204,39.0178832585811,44.5797199652249,28.2037176811975,35.976346651711,2.84071311571468,11.6854639385883,12.4054198950657,3.4243593645101,2.15384829287408,3.42401459862411,2.36035086531293,6.99530499812892,5.66930748691513,8.39474253753776,1.10411757875383,1.91960207048034,3.81950686618227,11.3107575900923,5.16312946244604,5.48519557191764,53.117484367411,59.1875945153299,174.566517090966,103.813641074337,61.8402437808502,30.0237002741071,39.0646701127893,63.6366565580725,12.7006134691926,13.5314253268605,0,12.4206196493048,18.7845149255096,19.1919194886627,6.27797446105362,8.5946887897618,9.42342739152837,15.2940186888064,6.83045484958446,7.76816564849846,2.39203954153597,3.24406179902447,7.89251034295231,10.1710874765245,22.2385659508055,28.7788899382158,23.5260177879883,13.0187372111587,15.8127820801469,5.20126078778983,8.70434570413613,6.38578218370682,9.00408026125814,7.16333599846892,27.3306208907044,3.43937983461316,3.70293685490423,3.1691570175309,13.8926258148344,7.11435836888911,4.49949858640699,11.8663963508037,4.9733608046227,17.0772062995491,21.9004434033286,1.8664130215526,2.29510095163874,1.05162480675691,27.9937964715728,21.8659855542097,2.69479758272899,2.97120960156533,1.83843757322004,20.9220173898839,21.8345348125671,25.3450779872802,3.42904348098504,3.7509933876988,2.6045668527838,39.6439858581961,32.0774687718058,26.7396933609418,12.0797720044204,23.2065839702538,6.33758115806022,5.2251073399897,3.09843396437821,15.0729534124872,61.0900952656784,33.9985666853875,63.1452734216246,94.8673569473597,77.0606245807417,31.5999945296442,4.09032774187339,9.09251016110041,7.42013106471715,12.8167511996779,11.5493829672886,0,7.11066703153331,9.30911476348221,10.1343946190039,12.1325866803548,31.5147508024606,1.8125651855302,3.85949561568544,6.41895709034703,6.08930956624282,9.22461989024234,8.28974523039424,5.87943535678524,17.3419896034952,6.67426412882809,39.6202237960558,7.07688441559899,17.794353494215,28.4885558813908,24.7286379098963,37.2783522436244,8.78342391034641,12.1479089951804,18.13745091981,14.4976300652164,11.3981518888747,13.2153036155987,9.43681028250383,9.60751265919116,0.753926112677186,5.73620256634512,6.64860189058859,14.1295870300501,12.3303359931496,3.7680564624617,11.0722203842983,4.54900965180614,9.89076722666428,6.76626303406059,5.0578462975364,4.14142898552303,5.42537344208574,1.90502197623718,3.84341160854549,1.96773621575431,12.4177617954728,6.68260778091811,4.72765200419548,3.51902248327898,3.5071317188412,5.00485048606076,3.1342694986995,4.11564272815887,4.57778813682534,7.72434506044558,12.0953516343916,9.09323198065896,35.6256328761063,47.8433162361436,49.6971289632401,31.9605393040034,80.6733350164356,92.8688019582017,96.5015870714193,105.163173348651,80.9183822604485,101.368867546704,183.046722448191,102.957388123237,161.550986104992,212.963611832319,156.484684274593,8.41159794256509,2.6755199218614,25.4422462897524,26.709507233018,5.97207101498655,3.48355007790658,4.76809606891745,16.1346819698674,18.902133726814,17.5007576023554,25.1500402618591,22.5637567971895,15.834118154417,16.9113001234978,11.307917052909,34.1551375288604,31.9884313814547,22.9012464242522,7.01771233526402,7.08340778180319,5.63538678365402,10.1825663922657,17.2617713579187,12.4841759404767,13.2164362589698,39.2642993625742,44.7446374347918,44.54637617577,23.7162101669719,6.34011401721157,5.89676985339609,9.66907083254871,7.30296436998611,9.16473207059184,8.91190481234969,15.8232875597946,26.7523124178808,31.0254396902532,4.31304619582064,18.9791883310937,30.2676542921124,18.9434158460334,34.4443033962071,54.0336743926971,5.54259570499814,10.2325362356062,4.88894929326078,6.78980343100753,8.21415869009757,6.70025029767263,7.37935286746643,9.56154874503214,4.88668946729192,5.3151525515706,4.62418829106713,10.1595255123758,11.569893785015,7.5217510462386,4.52373851817817,9.24639662491806,16.7199852826472,6.62248191131358,15.7339578188036,19.9259867206745,9.3442918864705,80.0332839237862,8.83423014365519,8.58965237452605,11.2020166821055,13.1432838873904,6.68396022247182,4.52922449262132,8.90583543684768,13.4437694639203,5.92931666919785,5.46246237917072,4.5420827266646,4.27357448801413,3.58351310577867,4.45419332025846,0,3.8844901784797,8.16273603804828,8.29862350925952,2.95301892880773,4.61152721915891,4.65170927702798,4.36240475373007,6.41695281092498,4.42451461110142,10.5418608574999,8.25084345985495,4.42571487479924,5.40183282093931,5.04498866752743,6.43011105094777,4.78818630834139,5.52943334566419,5.43011767986999,3.04464949114599,6.33613611772018,10.3797714723272,5.51320995137405,4.78170133530292,6.13564821444441,4.644095219468,3.58117032009409,1.14898629821543,20.4036585640896,19.655082013114,5.46786818553129,8.04908785056568,5.92622487583077,5.08594833912666,6.01454601972511,3.43167259809784,8.32894306969891,10.9162132812453,7.32459861163446,47.7335309007557,4.27053591334533,3.45643094115643,7.12835249423888,7.52717865652087,18.9975430459175,17.262636337257,8.84391976261094,31.9342249220516,16.9795615012249,9.32008969630389,6.20062232552609,4.48549638131936,6.9492565991981,3.11121901350476,5.03723311563151,3.71703476079712,3.28600268208111,4.81756223922615,6.60613869881978,9.18019659138823,15.2655903316669,2.8441000856536,8.5144590421869,8.31958753035101,8.57477431653447,4.47566739168704,4.96703386953162,4.20684073319891,4.43068581523732,3.93769154797776,2.97206545954499,4.63800451629466,2.14407337627455,4.81059208201647,2.33753804363138,28.1145675682862,10.433339808581,29.426144967908,16.9563462527719,5.02292944483695,8.44571139530319,5.31139710375069,3.21552568618599,4.51414893631827,22.0253218620656,18.8733346967943,24.0616115644547,19.247556422493,22.6077231524312,10.5755145634558,16.2005400055633,14.8605997063993,13.1411298605419,16.0505696643064,10.7938841487544,1.19707462020309,4.95127456686989,6.56388136084394,6.07878171621149,14.5236371675511,20.224452229947,24.7242068686673,17.0087181083662,20.4684741528676,16.2226751929753,16.4104917005886,23.4103768674706,16.8386150824806,16.8860278729503,17.6228665774737,16.803227262004,20.4483773691527,28.0218412546248,31.6477678288954,25.3723246765207,21.8295241575985,25.989544704258,22.8193874112756,20.7981730717881,22.8459441307527,18.8415812058956,19.9932980692761,26.481802199943,20.2011217796786,16.9648075917569,19.5038875103616,22.9169384175026,19.6769788306177,11.1885834369062,5.9954538705107,16.609144199624,14.8261027293326,29.267114806533,18.3090877869198,25.2735940826259
|phase1_expression=11.69086583865,84.103073241086,104.194825820204,39.0178832585811,44.5797199652249,28.2037176811975,35.976346651711,2.84071311571468,11.6854639385883,12.4054198950657,3.4243593645101,2.15384829287408,3.42401459862411,2.36035086531293,6.99530499812892,5.66930748691513,8.39474253753776,1.10411757875383,1.91960207048034,3.81950686618227,11.3107575900923,5.16312946244604,5.48519557191764,53.117484367411,59.1875945153299,174.566517090966,103.813641074337,61.8402437808502,30.0237002741071,39.0646701127893,63.6366565580725,12.7006134691926,13.5314253268605,0,12.4206196493048,18.7845149255096,19.1919194886627,6.27797446105362,8.5946887897618,9.42342739152837,15.2940186888064,6.83045484958446,7.76816564849846,2.39203954153597,3.24406179902447,7.89251034295231,10.1710874765245,22.2385659508055,28.7788899382158,23.5260177879883,13.0187372111587,15.8127820801469,5.20126078778983,8.70434570413613,6.38578218370682,9.00408026125814,7.16333599846892,27.3306208907044,3.43937983461316,3.70293685490423,3.1691570175309,13.8926258148344,7.11435836888911,4.49949858640699,11.8663963508037,4.9733608046227,17.0772062995491,21.9004434033286,1.8664130215526,2.29510095163874,1.05162480675691,27.9937964715728,21.8659855542097,2.69479758272899,2.97120960156533,1.83843757322004,20.9220173898839,21.8345348125671,25.3450779872802,3.42904348098504,3.7509933876988,2.6045668527838,39.6439858581961,32.0774687718058,26.7396933609418,12.0797720044204,23.2065839702538,6.33758115806022,5.2251073399897,3.09843396437821,15.0729534124872,61.0900952656784,33.9985666853875,63.1452734216246,94.8673569473597,77.0606245807417,31.5999945296442,4.09032774187339,9.09251016110041,7.42013106471715,12.8167511996779,11.5493829672886,0,7.11066703153331,9.30911476348221,10.1343946190039,12.1325866803548,31.5147508024606,1.8125651855302,3.85949561568544,6.41895709034703,6.08930956624282,9.22461989024234,8.28974523039424,5.87943535678524,17.3419896034952,6.67426412882809,39.6202237960558,7.07688441559899,17.794353494215,28.4885558813908,24.7286379098963,37.2783522436244,8.78342391034641,12.1479089951804,18.13745091981,14.4976300652164,11.3981518888747,13.2153036155987,9.43681028250383,9.60751265919116,0.753926112677186,5.73620256634512,6.64860189058859,14.1295870300501,12.3303359931496,3.7680564624617,11.0722203842983,4.54900965180614,9.89076722666428,6.76626303406059,5.0578462975364,4.14142898552303,5.42537344208574,1.90502197623718,3.84341160854549,1.96773621575431,12.4177617954728,6.68260778091811,4.72765200419548,3.51902248327898,3.5071317188412,5.00485048606076,3.1342694986995,4.11564272815887,4.57778813682534,7.72434506044558,12.0953516343916,9.09323198065896,35.6256328761063,47.8433162361436,49.6971289632401,31.9605393040034,80.6733350164356,92.8688019582017,96.5015870714193,105.163173348651,80.9183822604485,101.368867546704,183.046722448191,102.957388123237,161.550986104992,212.963611832319,156.484684274593,8.41159794256509,2.6755199218614,25.4422462897524,26.709507233018,5.97207101498655,3.48355007790658,4.76809606891745,16.1346819698674,18.902133726814,17.5007576023554,25.1500402618591,22.5637567971895,15.834118154417,16.9113001234978,11.307917052909,34.1551375288604,31.9884313814547,22.9012464242522,7.01771233526402,7.08340778180319,5.63538678365402,10.1825663922657,17.2617713579187,12.4841759404767,13.2164362589698,39.2642993625742,44.7446374347918,44.54637617577,23.7162101669719,6.34011401721157,5.89676985339609,9.66907083254871,7.30296436998611,9.16473207059184,8.91190481234969,15.8232875597946,26.7523124178808,31.0254396902532,4.31304619582064,18.9791883310937,30.2676542921124,18.9434158460334,34.4443033962071,54.0336743926971,5.54259570499814,10.2325362356062,4.88894929326078,6.78980343100753,8.21415869009757,6.70025029767263,7.37935286746643,9.56154874503214,4.88668946729192,5.3151525515706,4.62418829106713,10.1595255123758,11.569893785015,7.5217510462386,4.52373851817817,9.24639662491806,16.7199852826472,6.62248191131358,15.7339578188036,19.9259867206745,9.3442918864705,80.0332839237862,8.83423014365519,8.58965237452605,11.2020166821055,13.1432838873904,6.68396022247182,4.52922449262132,8.90583543684768,13.4437694639203,5.92931666919785,5.46246237917072,4.5420827266646,4.27357448801413,3.58351310577867,4.45419332025846,0,3.8844901784797,8.16273603804828,8.29862350925952,2.95301892880773,4.61152721915891,4.65170927702798,4.36240475373007,6.41695281092498,4.42451461110142,10.5418608574999,8.25084345985495,4.42571487479924,5.40183282093931,5.04498866752743,6.43011105094777,4.78818630834139,5.52943334566419,5.43011767986999,3.04464949114599,6.33613611772018,10.3797714723272,5.51320995137405,4.78170133530292,6.13564821444441,4.644095219468,3.58117032009409,1.14898629821543,20.4036585640896,19.655082013114,5.46786818553129,8.04908785056568,5.92622487583077,5.08594833912666,6.01454601972511,3.43167259809784,8.32894306969891,10.9162132812453,7.32459861163446,47.7335309007557,4.27053591334533,3.45643094115643,7.12835249423888,7.52717865652087,18.9975430459175,17.262636337257,8.84391976261094,31.9342249220516,16.9795615012249,9.32008969630389,6.20062232552609,4.48549638131936,6.9492565991981,3.11121901350476,5.03723311563151,3.71703476079712,3.28600268208111,4.81756223922615,6.60613869881978,9.18019659138823,15.2655903316669,2.8441000856536,8.5144590421869,8.31958753035101,8.57477431653447,4.47566739168704,4.96703386953162,4.20684073319891,4.43068581523732,3.93769154797776,2.97206545954499,4.63800451629466,2.14407337627455,4.81059208201647,2.33753804363138,28.1145675682862,10.433339808581,29.426144967908,16.9563462527719,5.02292944483695,8.44571139530319,5.31139710375069,3.21552568618599,4.51414893631827,22.0253218620656,18.8733346967943,24.0616115644547,19.247556422493,22.6077231524312,10.5755145634558,16.2005400055633,14.8605997063993,13.1411298605419,16.0505696643064,10.7938841487544,1.19707462020309,4.95127456686989,6.56388136084394,6.07878171621149,14.5236371675511,20.224452229947,24.7242068686673,17.0087181083662,20.4684741528676,16.2226751929753,16.4104917005886,23.4103768674706,16.8386150824806,16.8860278729503,17.6228665774737,16.803227262004,20.4483773691527,28.0218412546248,31.6477678288954,25.3723246765207,21.8295241575985,25.989544704258,22.8193874112756,20.7981730717881,22.8459441307527,18.8415812058956,19.9932980692761,26.481802199943,20.2011217796786,16.9648075917569,19.5038875103616,22.9169384175026,19.6769788306177,11.1885834369062,5.9954538705107,16.609144199624,14.8261027293326,29.267114806533,18.3090877869198,25.2735940826259
|short_description=p2@Uqcrh
}}
}}

Revision as of 14:44, 18 April 2012

Short description:p2@Uqcrh
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Uqcrh_5end
Coexpression cluster:NA
Association with transcript: 13bp_to_ENSMUST00000050580_5end
EntrezGene:Uqcrh
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Uqcrh

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I584.10
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6104.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I339.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I444.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I728.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I835.98
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E711.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F212.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.36
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.67
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.49
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D153.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D259.19
GP2+ M cell, pool1.CNhs13228.11845-124H9174.57
GP2+ M cell, pool2.CNhs13231.11846-124I1103.81
GP2+ M cell, pool3.CNhs13240.11847-124I261.84
Ileum epithelium, pool1.CNhs13199.10252-104B930.02
Ileum epithelium, pool2.CNhs13232.10253-104C139.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C863.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G613.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.42
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F618.78
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F719.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G915.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.89
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C222.24
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B828.78
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C323.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.20
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C527.33
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.89
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C817.08
Mouse Microglia, donor2.CNhs12634.11736-123E821.90
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.75
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E439.64
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E532.08
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I626.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.21
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D95.23
Mouse Schwann, donor2.CNhs12573.11746-123F93.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.07
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F761.09
Mouse hepatocyte, donor1.CNhs13078.11714-123C434.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C863.15
Mouse hepatocyte, donor6.CNhs13090.11822-124F494.87
Mouse hepatocyte, donor8.CNhs13091.11824-124F677.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A731.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.42
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.13
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.13
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B631.51
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C56.42
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I19.22
adrenal gland, embryo E18.CNhs11026.1262-18F58.29
adrenal gland, neonate N00.CNhs11191.1311-23C15.88
adrenal gland, neonate N25.CNhs11223.1377-27I317.34
amnion, adult pregnant day17.5.CNhs10488.583-22A86.67
aorta, adult.CNhs10498.46-23H139.62
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F517.79
bone (os femoris), neonate N16.CNhs11225.1525-43A628.49
bone (os femoris), neonate N20.CNhs11195.1350-25C324.73
cecum, adult.CNhs10467.37-13H437.28
cerebellum, adult.CNhs10494.15-8B28.78
cerebellum, neonate N30.CNhs11135.1395-42I212.15
colon, adult.CNhs10468.36-18H718.14
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C714.50
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.22
corpora quadrigemina, adult.CNhs10501.16-22A49.44
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F214.13
diencephalon, neonate N30.CNhs11201.1388-42B212.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.07
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G49.89
eyeball, embryo E12.CNhs11016.345-16C66.77
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C94.14
eyeball, embryo E17.CNhs11023.1261-18D45.43
eyeball, neonate N00.CNhs11207.633-15C61.91
eyeball, neonate N01.CNhs11140.1532-43E73.84
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A212.42
forelimb, embryo E11.CNhs10596.335-25E26.68
forelimb, embryo E12.CNhs10600.359-14H24.73
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I64.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D212.10
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.09
heart, embryo E11.CNhs10586.331-24E935.63
heart, embryo E12.CNhs11015.353-12F547.84
heart, embryo E13.CNhs11013.376-3I949.70
heart, embryo E14.CNhs10597.403-26D431.96
heart, embryo E15.CNhs11017.431-16C880.67
heart, embryo E16.CNhs11021.457-17C692.87
heart, embryo E17.CNhs11025.479-18E596.50
heart, embryo E18.CNhs11030.1283-20G3105.16
heart, neonate N00.CNhs11213.639-21E380.92
heart, neonate N03.CNhs11221.1349-25I2101.37
heart, neonate N10.CNhs11118.749-24G1183.05
heart, neonate N16.CNhs11209.782-15G1102.96
heart, neonate N20.CNhs11127.821-26I6161.55
heart, neonate N25.CNhs11196.1351-25D3212.96
heart, neonate N30.CNhs11202.1390-42D2156.48
hippocampus, adult.CNhs10478.13-16E88.41
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I325.44
intestine, adult.CNhs10496.178-9A326.71
intestine, embryo E12.CNhs11019.1251-16I55.97
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D84.77
intestine, embryo E16.CNhs10585.463-22H416.13
intestine, embryo E17.CNhs10582.482-18D318.90
intestine, embryo E18.CNhs10526.1289-20F717.50
intestine, neonate N00.CNhs11126.644-26D125.15
intestine, neonate N01.CNhs11192.1322-23E922.56
intestine, neonate N06.CNhs11102.688-20B815.83
intestine, neonate N07.CNhs11095.720-20F216.91
intestine, neonate N10.CNhs11098.755-23A511.31
intestine, neonate N20.CNhs11187.827-18D134.16
intestine, neonate N25.CNhs11121.1352-25E331.99
intestine, neonate N30.CNhs11131.1384-42G122.90
kidney, embryo E14.CNhs10606.411-4I97.02
kidney, embryo E15.CNhs10997.434-16F87.08
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I210.18
kidney, embryo E18.CNhs11001.1288-20C717.26
kidney, neonate N00.CNhs11214.646-21G712.48
kidney, neonate N10.CNhs11206.758-6D513.22
kidney, neonate N20.CNhs11113.832-19I139.26
kidney, neonate N25.CNhs11122.1353-25F344.74
kidney, neonate N30.CNhs11203.1385-42H144.55
liver, adult pregnant day01.CNhs10466.508-5B223.72
liver, embryo E12.CNhs10601.355-15F86.34
liver, embryo E13.CNhs10524.378-3H65.90
liver, embryo E14.CNhs10594.409-16E19.67
liver, embryo E15.CNhs10520.433-16D77.30
liver, embryo E16.CNhs10523.462-17F59.16
liver, embryo E17.CNhs10510.481-18A38.91
liver, embryo E18.CNhs10579.499-43G415.82
liver, neonate N00.CNhs11117.641-24F426.75
liver, neonate N03.CNhs11123.1345-25G231.03
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H218.98
liver, neonate N10.CNhs11115.751-24B930.27
liver, neonate N20.CNhs11220.823-25A318.94
liver, neonate N25.CNhs11198.1368-26H134.44
liver, neonate N30.CNhs11106.1382-42D154.03
lung, adult.CNhs10474.28-22B15.54
lung, embryo E12.CNhs10522.354-16G210.23
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C56.79
lung, embryo E16.CNhs10998.458-17B68.21
lung, embryo E17.CNhs10605.480-44A66.70
lung, embryo E18.CNhs10583.1287-20I67.38
lung, neonate N00.CNhs11224.640-42C69.56
lung, neonate N06.CNhs11212.683-20E54.89
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E64.62
lung, neonate N20.CNhs11109.822-18A410.16
lung, neonate N25.CNhs11119.1359-25C711.57
lung, neonate N30.CNhs11133.1394-42H27.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.25
mammary gland, adult lactating day02.CNhs10480.595-22B616.72
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C215.73
medulla oblongata, neonate N30.CNhs11200.1396-42A319.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.34
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C280.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.59
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.20
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.14
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.44
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I74.54
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F28.16
pancreas, embryo E16.CNhs11003.460-26E58.30
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E65.40
pituitary gland, embryo E13.CNhs11009.370-44C75.04
pituitary gland, embryo E14.CNhs11037.398-44A56.43
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F65.53
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I76.34
placenta, adult pregnant day17.CNhs10464.577-18G310.38
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C34.78
skin, neonate N00.CNhs11124.650-25G46.14
skin, neonate N03.CNhs11215.662-22H34.64
skin, neonate N06.CNhs11097.693-20I53.58
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I120.40
spinal cord, adult.CNhs10505.24-13C919.66
spleen, adult.CNhs10465.25-2G25.47
spleen, embryo E16.CNhs11035.461-43C18.05
spleen, embryo E18.CNhs11011.1271-21F25.93
spleen, neonate N10.CNhs11116.752-24D15.09
spleen, neonate N20.CNhs11112.824-19H16.01
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.32
stomach, adult.CNhs10503.33-1H647.73
stomach, embryo E12.CNhs10588.356-43E34.27
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D47.13
stomach, embryo E17.CNhs11006.1035-18D57.53
stomach, embryo E18.CNhs10999.1286-20C619.00
stomach, neonate N03.CNhs11193.1340-24B817.26
stomach, neonate N07.CNhs11210.718-18A98.84
stomach, neonate N25.CNhs11104.1355-25E431.93
stomach, neonate N30.CNhs11134.1386-42I116.98
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F54.49
testis, embryo E15.CNhs11034.443-27C56.95
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I55.04
testis, embryo E18.CNhs11027.503-18G53.72
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I44.82
testis, neonate N10.CNhs11204.763-44D96.61
testis, neonate N20.CNhs11110.839-18H39.18
testis, neonate N30.CNhs11130.1391-42E215.27
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I48.51
thymus, embryo E15.CNhs11005.430-45I28.32
thymus, embryo E16.CNhs11002.456-26C58.57
thymus, embryo E17.CNhs10581.478-18C14.48
thymus, embryo E18.CNhs10595.1273-19G44.97
thymus, neonate N02.CNhs11181.1541-43F84.21
thymus, neonate N03.CNhs11137.2104-43C74.43
thymus, neonate N06.CNhs11197.681-26C43.94
thymus, neonate N07.CNhs11211.713-19D32.97
thymus, neonate N10.CNhs11194.748-24E44.64
thymus, neonate N20.CNhs11186.820-7A22.14
thymus, neonate N25.CNhs11125.1362-25G74.81
thymus, neonate N30.CNhs11132.1393-42G22.34
tongue, adult.CNhs10499.32-1B428.11
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H310.43
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F729.43
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G516.96
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F58.45
uterus, adult.CNhs10509.92-27E55.31
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.05
whole body, embryo E11.CNhs11014.324-5I810.79
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D26.56
whole body, embryo E14.CNhs10519.395-14B16.08
whole body, embryo E16.CNhs10514.453-14F214.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G524.72
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.01
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.47
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.41
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.89
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G517.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.80
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.45
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G528.02
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G531.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G525.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G521.83
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G525.99
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.82
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G526.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.20
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.96
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.50
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.92
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.68
whole body, embryo E17.5.CNhs10513.490-9F911.19
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B316.61
whole body, neonate N00.CNhs10525.657-19C214.83
whole body, neonate N01.CNhs10576.659-23C629.27
whole body, neonate N06.CNhs10515.692-21D118.31
whole body, neonate N10.CNhs10518.761-6B425.27





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:115747605..115747622,-&oldid=897179"