Personal tools

FFCP PHASE1:Mm9::chr5:137729501..137729520,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:137729501..137729520,+
|short_description=p1@Ache
|description=CAGE_peak_1_at_Ache_5end
|association_with_transcript=0bp_to_ENSMUST00000024099,ENSMUST00000085934,ENSMUST00000150983,NM_009599,uc009abu.1,uc009abv.1,uc009abw.1,uc009abx.1_5end
|EntrezGene=11423
|EntrezGene=11423
|HGNC=
|HGNC=
|UniProt=P21836,Q543Z1
|UniProt=P21836,Q543Z1
|association_with_transcript=0bp_to_ENSMUST00000024099,ENSMUST00000085934,ENSMUST00000150983,NM_009599,uc009abu.1,uc009abv.1,uc009abw.1,uc009abx.1_5end
|description=CAGE_peak_1_at_Ache_5end
|id=chr5:137729501..137729520,+
|ontology_enrichment_disease=
|phase1_expression=2.40223270657191,0.348975407639361,1.36499771816861,0,0,2.18243053485457,1.86890112476421,0.387369970324729,0,0.234064526321993,0,0,0,0.0874204024189974,44.3035983214831,50.2138663126768,115.427709891144,1.10411757875383,1.09691546884591,3.39511721438424,12.8415368128115,0.198581902401771,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.430942465371778,0,0.252030129759931,0.665191531965914,6.98533740805594,8.61090702618398,0,0.866554859253824,0.332469290716985,0.408338712524738,0.837063261473815,0,0,0.588231488031014,3.41522742479223,0.971020706062307,0,0,0,7.04152209913235,1.52617609466313,1.5378032791413,2.72201858703997,0.139986421625363,1.43752564364972,0,0.725362142011344,0.336093799142464,0.257259436035947,0.286533439938757,2.06268836910977,20.636279007679,20.1016572123373,21.5502677192101,0.338844532069132,0,0,0,0,1.19840044207362,1.15265491596466,0.622137673850866,1.21505344498522,0.841299845405528,152.537625671631,120.594223359581,1.5923803897944,1.72521847832825,1.83843757322004,124.430945529309,112.620232191136,119.966702473126,17.672762555846,25.9824907830843,15.6274011167028,166.951433402826,150.82037948849,133.851265052486,108.42331945431,95.6737694969972,49.7686520353553,2.19605960666234,2.64500460373749,2.6087803983151,2.58127163094416,0,0.539703191637817,0.649776417447669,0,15.4488862144927,0,0,0,2.25349471642689,0,0,0,0,0,0,5.48082622651488,11.1343289968284,11.7269289861212,6.59244241711316,8.8294988710521,9.4552353874984,7.83757730873637,9.17191915658498,4.14699751387929,3.95511948374998,2.02439099687876,53.9612436689423,32.5151368394292,55.6520626520192,48.4875253135222,3.72783522436244,29.8636412951778,29.3225389538837,2.81002760729451,4.31334448221313,1.79970819298022,2.03312363316904,84.3321299849152,59.0175777636028,21.2355855070741,26.421296669226,26.0829766476937,94.3357722300403,67.9790892253905,3.25885964321012,30.6041147700829,0.505445516867349,13.2578369208479,2.99277018814219,5.0578462975364,7.74267158163002,11.6042709733501,9.5251098811859,7.94305065766069,11.3379086717272,21.7310831420773,2.37124792226126,10.0226222488944,10.0292140773451,11.6173738186615,6.95118123063995,11.8405736617537,8.64284972913362,1.79130840136644,0,0,1.13665399758237,17.3985648929822,15.2441938987713,9.00310307305074,8.99629995223799,5.3126342571799,3.5481435964097,4.18561100550734,3.21928081679543,2.91913355917924,1.48103864922132,3.11918181750281,6.08016071593918,3.36259971078264,4.61055242111206,3.89198614405078,26.9171134162083,9.67303356365274,0.330418782983798,3.17340679996253,2.55945900642281,4.18026009348789,7.21657783403723,5.04208811558356,7.56085349072559,7.03834816616469,2.84717436926707,6.91735609840846,3.77002813200404,6.16765063327568,8.77338392036041,4.49409704327111,2.37751854862164,2.38969527905241,1.13800740571849,3.08470984046268,1.1270773567308,4.88763186828754,7.37019451236978,8.83711330618014,10.2443190141297,8.41377843483732,5.80895293013087,9.74837594982224,0.889357881261447,64.7359010178445,56.4124315974893,64.7602883668379,67.9581406651485,57.6413411808276,31.3189797691146,33.372751944294,24.3202840162553,16.4736847912849,18.6898668485561,7.81495990103857,3.74445207737473,0.252578877947112,1.07638448113147,0.964887042726734,2.40179147216586,4.73728529426212,0.651859905768103,1.52770577197669,0.938760993154008,2.51259386162724,2.38043640886014,2.34160377429359,2.67979744980525,1.55025282754142,5.10255259703959,2.78567635016755,1.89953480052485,1.44649058581512,0,0,0.491764273019036,0.827810238914197,114.15146948132,112.640430815107,0,56.8059586209839,26.5026904309656,20.6932534477218,41.792139160163,5.9742199488138,10.2487390077901,12.1722908239198,15.382806663646,31.5636326544217,31.6230222357219,37.5945940213514,0.283880170416537,6.94455854302295,5.37526965866801,1.64970122972535,0,1.45668381692989,1.81394134178851,0.943025398779491,1.18120757152309,4.61152721915891,4.13485269069154,2.18120237686503,5.70395805415554,4.42451461110142,1.05418608574999,1.03135543248187,21.7881347682424,1.62054984628179,2.45781499187234,2.7863814554107,1.59606210278046,9.27517851530767,10.0374902567294,19.1812917942198,1.87737366450968,13.7690846061483,9.04166432025344,32.1528193235886,5.16686165426898,6.6947346670253,5.01363844813173,3.77524069413641,4.95517422270746,109.586353488211,57.2417450672807,2.68302928352189,14.0747840800981,97.5748607284299,98.4198439591381,72.0651245600546,4.41943917984024,6.43776680688827,5.8043988997858,8.59203556213602,4.58687190692646,8.3360981522008,5.50827238191186,5.64538399239065,6.55087691238533,6.74321731924104,11.1582165229204,4.97336289769656,4.79575401179634,0,0,0.448549638131936,0.992750942742586,0.583353565032143,0.387479470433193,1.18269287843545,1.76035857968631,2.21347454234715,0.419437377702843,0.241584120826006,6.62469014393091,21.4887562027161,56.1548846353755,101.991980464673,75.2241565041433,77.6975859196869,46.6901183735973,38.58273929591,40.7623095001833,31.0976665840295,31.4734111485149,29.8445508005048,28.8475326989667,25.7847735596083,23.4922573384954,26.5274548829797,0,0.0897138566094757,0.167884616364078,3.47741269257943,0,0.73260649706906,0.857473516316263,3.51100472824754,27.6728402882363,42.8102469951675,33.8008352929244,40.2136446684229,24.6629707117431,24.9279986138601,24.9758325085768,25.6683085837806,22.6571204492102,17.0860902878101,1.764384908931,8.37952234142165,15.8782253351345,22.8520314044196,6.49800804146745,7.90527086335061,15.5572709461131,17.3069448080671,18.9342333659171,21.226565788159,19.2644267916582,18.4853814558355,20.9756976732537,23.9454069994211,22.6870102374672,18.5754539600399,21.0909473219637,22.1845603533261,14.0109206273124,20.9022466590844,16.8005933668854,17.5701048097744,18.1211504359964,18.7496877455704,20.7040636913727,21.2382665808108,19.5732930973867,22.0978557607788,19.5557923938041,12.906272248128,22.3033834073447,20.8829502636195,14.3230865109391,20.6065998777335,18.1332214322273,25.4806789496705,20.1181183263051,26.2142685938924,29.4584031386019,40.3682296988713,27.5922724388302
|phase1_expression=2.40223270657191,0.348975407639361,1.36499771816861,0,0,2.18243053485457,1.86890112476421,0.387369970324729,0,0.234064526321993,0,0,0,0.0874204024189974,44.3035983214831,50.2138663126768,115.427709891144,1.10411757875383,1.09691546884591,3.39511721438424,12.8415368128115,0.198581902401771,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.430942465371778,0,0.252030129759931,0.665191531965914,6.98533740805594,8.61090702618398,0,0.866554859253824,0.332469290716985,0.408338712524738,0.837063261473815,0,0,0.588231488031014,3.41522742479223,0.971020706062307,0,0,0,7.04152209913235,1.52617609466313,1.5378032791413,2.72201858703997,0.139986421625363,1.43752564364972,0,0.725362142011344,0.336093799142464,0.257259436035947,0.286533439938757,2.06268836910977,20.636279007679,20.1016572123373,21.5502677192101,0.338844532069132,0,0,0,0,1.19840044207362,1.15265491596466,0.622137673850866,1.21505344498522,0.841299845405528,152.537625671631,120.594223359581,1.5923803897944,1.72521847832825,1.83843757322004,124.430945529309,112.620232191136,119.966702473126,17.672762555846,25.9824907830843,15.6274011167028,166.951433402826,150.82037948849,133.851265052486,108.42331945431,95.6737694969972,49.7686520353553,2.19605960666234,2.64500460373749,2.6087803983151,2.58127163094416,0,0.539703191637817,0.649776417447669,0,15.4488862144927,0,0,0,2.25349471642689,0,0,0,0,0,0,5.48082622651488,11.1343289968284,11.7269289861212,6.59244241711316,8.8294988710521,9.4552353874984,7.83757730873637,9.17191915658498,4.14699751387929,3.95511948374998,2.02439099687876,53.9612436689423,32.5151368394292,55.6520626520192,48.4875253135222,3.72783522436244,29.8636412951778,29.3225389538837,2.81002760729451,4.31334448221313,1.79970819298022,2.03312363316904,84.3321299849152,59.0175777636028,21.2355855070741,26.421296669226,26.0829766476937,94.3357722300403,67.9790892253905,3.25885964321012,30.6041147700829,0.505445516867349,13.2578369208479,2.99277018814219,5.0578462975364,7.74267158163002,11.6042709733501,9.5251098811859,7.94305065766069,11.3379086717272,21.7310831420773,2.37124792226126,10.0226222488944,10.0292140773451,11.6173738186615,6.95118123063995,11.8405736617537,8.64284972913362,1.79130840136644,0,0,1.13665399758237,17.3985648929822,15.2441938987713,9.00310307305074,8.99629995223799,5.3126342571799,3.5481435964097,4.18561100550734,3.21928081679543,2.91913355917924,1.48103864922132,3.11918181750281,6.08016071593918,3.36259971078264,4.61055242111206,3.89198614405078,26.9171134162083,9.67303356365274,0.330418782983798,3.17340679996253,2.55945900642281,4.18026009348789,7.21657783403723,5.04208811558356,7.56085349072559,7.03834816616469,2.84717436926707,6.91735609840846,3.77002813200404,6.16765063327568,8.77338392036041,4.49409704327111,2.37751854862164,2.38969527905241,1.13800740571849,3.08470984046268,1.1270773567308,4.88763186828754,7.37019451236978,8.83711330618014,10.2443190141297,8.41377843483732,5.80895293013087,9.74837594982224,0.889357881261447,64.7359010178445,56.4124315974893,64.7602883668379,67.9581406651485,57.6413411808276,31.3189797691146,33.372751944294,24.3202840162553,16.4736847912849,18.6898668485561,7.81495990103857,3.74445207737473,0.252578877947112,1.07638448113147,0.964887042726734,2.40179147216586,4.73728529426212,0.651859905768103,1.52770577197669,0.938760993154008,2.51259386162724,2.38043640886014,2.34160377429359,2.67979744980525,1.55025282754142,5.10255259703959,2.78567635016755,1.89953480052485,1.44649058581512,0,0,0.491764273019036,0.827810238914197,114.15146948132,112.640430815107,0,56.8059586209839,26.5026904309656,20.6932534477218,41.792139160163,5.9742199488138,10.2487390077901,12.1722908239198,15.382806663646,31.5636326544217,31.6230222357219,37.5945940213514,0.283880170416537,6.94455854302295,5.37526965866801,1.64970122972535,0,1.45668381692989,1.81394134178851,0.943025398779491,1.18120757152309,4.61152721915891,4.13485269069154,2.18120237686503,5.70395805415554,4.42451461110142,1.05418608574999,1.03135543248187,21.7881347682424,1.62054984628179,2.45781499187234,2.7863814554107,1.59606210278046,9.27517851530767,10.0374902567294,19.1812917942198,1.87737366450968,13.7690846061483,9.04166432025344,32.1528193235886,5.16686165426898,6.6947346670253,5.01363844813173,3.77524069413641,4.95517422270746,109.586353488211,57.2417450672807,2.68302928352189,14.0747840800981,97.5748607284299,98.4198439591381,72.0651245600546,4.41943917984024,6.43776680688827,5.8043988997858,8.59203556213602,4.58687190692646,8.3360981522008,5.50827238191186,5.64538399239065,6.55087691238533,6.74321731924104,11.1582165229204,4.97336289769656,4.79575401179634,0,0,0.448549638131936,0.992750942742586,0.583353565032143,0.387479470433193,1.18269287843545,1.76035857968631,2.21347454234715,0.419437377702843,0.241584120826006,6.62469014393091,21.4887562027161,56.1548846353755,101.991980464673,75.2241565041433,77.6975859196869,46.6901183735973,38.58273929591,40.7623095001833,31.0976665840295,31.4734111485149,29.8445508005048,28.8475326989667,25.7847735596083,23.4922573384954,26.5274548829797,0,0.0897138566094757,0.167884616364078,3.47741269257943,0,0.73260649706906,0.857473516316263,3.51100472824754,27.6728402882363,42.8102469951675,33.8008352929244,40.2136446684229,24.6629707117431,24.9279986138601,24.9758325085768,25.6683085837806,22.6571204492102,17.0860902878101,1.764384908931,8.37952234142165,15.8782253351345,22.8520314044196,6.49800804146745,7.90527086335061,15.5572709461131,17.3069448080671,18.9342333659171,21.226565788159,19.2644267916582,18.4853814558355,20.9756976732537,23.9454069994211,22.6870102374672,18.5754539600399,21.0909473219637,22.1845603533261,14.0109206273124,20.9022466590844,16.8005933668854,17.5701048097744,18.1211504359964,18.7496877455704,20.7040636913727,21.2382665808108,19.5732930973867,22.0978557607788,19.5557923938041,12.906272248128,22.3033834073447,20.8829502636195,14.3230865109391,20.6065998777335,18.1332214322273,25.4806789496705,20.1181183263051,26.2142685938924,29.4584031386019,40.3682296988713,27.5922724388302
|short_description=p1@Ache
}}
}}

Revision as of 17:27, 18 April 2012

Short description:p1@Ache
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ache_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000024099, ENSMUST00000085934, ENSMUST00000150983, NM_009599, uc009abu.1, uc009abv.1, uc009abw.1, uc009abx.1_5end
EntrezGene:Ache
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ache

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A144.30
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A350.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5115.43
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C320.64
Mouse Granule cells, donor2.CNhs12357.11731-123E320.10
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1152.54
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5120.59
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3124.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3112.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7119.97
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4166.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5150.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6133.85
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6108.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F695.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E149.77
Mouse Schwann, donor1.CNhs12507.11728-123D92.20
Mouse Schwann, donor2.CNhs12573.11746-123F92.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.48
accessory axillary lymph node, adult.CNhs10475.1063-29H911.13
adrenal gland, adult.CNhs10508.49-24D711.73
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D68.83
adrenal gland, embryo E17.CNhs11043.1263-45I19.46
adrenal gland, embryo E18.CNhs11026.1262-18F57.84
adrenal gland, neonate N00.CNhs11191.1311-23C19.17
adrenal gland, neonate N25.CNhs11223.1377-27I34.15
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G253.96
bone (os femoris), neonate N02.CNhs11227.1985-43F532.52
bone (os femoris), neonate N16.CNhs11225.1525-43A655.65
bone (os femoris), neonate N20.CNhs11195.1350-25C348.49
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B229.86
cerebellum, neonate N30.CNhs11135.1395-42I229.32
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.31
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A484.33
corpus striatum, adult.CNhs10487.19-21D859.02
corpus striatum, neonate N00.CNhs11226.630-43F121.24
cortex, adult.CNhs10473.12-14D526.42
cortex, neonate N30.CNhs11107.1392-42F226.08
diencephalon, adult.CNhs10482.20-12F294.34
diencephalon, neonate N30.CNhs11201.1388-42B267.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.26
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A230.60
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G413.26
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C97.74
eyeball, embryo E17.CNhs11023.1261-18D411.60
eyeball, neonate N00.CNhs11207.633-15C69.53
eyeball, neonate N01.CNhs11140.1532-43E77.94
eyeball, neonate N02.CNhs11205.1551-44G811.34
eyeball, neonate N16.CNhs11188.777-19A221.73
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H210.02
forelimb, embryo E13.CNhs10589.384-1E210.03
forelimb, embryo E14.CNhs10577.413-26A811.62
forelimb, embryo E15.CNhs11007.437-20E76.95
forelimb, embryo E17.CNhs10598.1517-43C411.84
forelimb, embryo E18.CNhs11008.1520-43B58.64
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E917.40
heart, embryo E12.CNhs11015.353-12F515.24
heart, embryo E13.CNhs11013.376-3I99.00
heart, embryo E14.CNhs10597.403-26D49.00
heart, embryo E15.CNhs11017.431-16C85.31
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E32.92
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G16.08
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D23.89
hippocampus, adult.CNhs10478.13-16E826.92
hippocampus, neonate N00.CNhs11228.627-43G19.67
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D87.22
intestine, embryo E16.CNhs10585.463-22H45.04
intestine, embryo E17.CNhs10582.482-18D37.56
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E96.92
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F26.17
intestine, neonate N10.CNhs11098.755-23A58.77
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F83.08
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I24.89
kidney, embryo E18.CNhs11001.1288-20C77.37
kidney, neonate N00.CNhs11214.646-21G78.84
kidney, neonate N10.CNhs11206.758-6D510.24
kidney, neonate N20.CNhs11113.832-19I18.41
kidney, neonate N25.CNhs11122.1353-25F35.81
kidney, neonate N30.CNhs11203.1385-42H19.75
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F864.74
liver, embryo E13.CNhs10524.378-3H656.41
liver, embryo E14.CNhs10594.409-16E164.76
liver, embryo E15.CNhs10520.433-16D767.96
liver, embryo E16.CNhs10523.462-17F557.64
liver, embryo E17.CNhs10510.481-18A331.32
liver, embryo E18.CNhs10579.499-43G433.37
liver, neonate N00.CNhs11117.641-24F424.32
liver, neonate N03.CNhs11123.1345-25G216.47
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H27.81
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E52.68
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E65.10
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C2114.15
medulla oblongata, neonate N30.CNhs11200.1396-42A3112.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C256.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E126.50
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E220.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E341.79
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.97
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.25
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.17
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.38
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D531.56
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D631.62
olfactory brain, adult.CNhs10489.18-22I937.59
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H76.94
ovary, neonate N00.CNhs11217.1299-22I45.38
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G821.79
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F69.28
pituitary gland, embryo E17.CNhs11039.1265-44F510.04
pituitary gland, neonate N00.CNhs11190.1308-22E919.18
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G313.77
prostate, adult.CNhs10470.859-1F89.04
skin, adult.CNhs10492.30-1C332.15
skin, neonate N00.CNhs11124.650-25G45.17
skin, neonate N03.CNhs11215.662-22H36.69
skin, neonate N06.CNhs11097.693-20I55.01
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C9109.59
spleen, adult.CNhs10465.25-2G257.24
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F214.07
spleen, neonate N10.CNhs11116.752-24D197.57
spleen, neonate N20.CNhs11112.824-19H198.42
spleen, neonate N25.CNhs11099.1354-25G372.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.80
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E34.59
stomach, embryo E15.CNhs10603.1252-16G88.34
stomach, embryo E16.CNhs11022.459-17D45.51
stomach, embryo E17.CNhs11006.1035-18D55.65
stomach, embryo E18.CNhs10999.1286-20C66.55
stomach, neonate N03.CNhs11193.1340-24B86.74
stomach, neonate N07.CNhs11210.718-18A911.16
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I14.80
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E26.62
thymus, adult.CNhs10471.38-12B521.49
thymus, embryo E14.CNhs11041.402-44I456.15
thymus, embryo E15.CNhs11005.430-45I2101.99
thymus, embryo E16.CNhs11002.456-26C575.22
thymus, embryo E17.CNhs10581.478-18C177.70
thymus, embryo E18.CNhs10595.1273-19G446.69
thymus, neonate N02.CNhs11181.1541-43F838.58
thymus, neonate N03.CNhs11137.2104-43C740.76
thymus, neonate N06.CNhs11197.681-26C431.10
thymus, neonate N07.CNhs11211.713-19D331.47
thymus, neonate N10.CNhs11194.748-24E429.84
thymus, neonate N20.CNhs11186.820-7A228.85
thymus, neonate N25.CNhs11125.1362-25G725.78
thymus, neonate N30.CNhs11132.1393-42G223.49
tongue, adult.CNhs10499.32-1B426.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E43.48
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A127.67
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A242.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A333.80
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D740.21
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A424.66
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A725.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A822.66
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.09
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C98.38
whole body, embryo E13.CNhs10512.372-23H215.88
whole body, embryo E14.5.CNhs10578.420-27D222.85
whole body, embryo E14.CNhs10519.395-14B16.50
whole body, embryo E16.CNhs10514.453-14F27.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.31
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.23
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.26
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.49
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.98
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G523.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G522.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.18
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.90
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.12
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.75
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.70
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G521.24
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.56
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.88
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.61
whole body, embryo E17.5.CNhs10513.490-9F918.13
whole body, embryo E17.CNhs10517.475-3I525.48
whole body, embryo E18.CNhs10516.493-3B320.12
whole body, neonate N00.CNhs10525.657-19C226.21
whole body, neonate N01.CNhs10576.659-23C629.46
whole body, neonate N06.CNhs10515.692-21D140.37
whole body, neonate N10.CNhs10518.761-6B427.59





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:137729501..137729520,%2B&oldid=921723"