Personal tools

FFCP PHASE1:Mm9::chr15:77137042..77137081,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_3_at_Rbfox2_5end
|description=CAGE_peak_3_at_Rbfox2_5end
|id=chr15:77137042..77137081,-
|id=chr15:77137042..77137081,-
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=14.733693933641,1.74487703819681,2.27499619694768,5.44435580352294,6.01074875935617,5.54001597309236,3.03696432774183,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,6.63337663178344,0,0.261199789138935,1.91990907352088,0.68822784320151,1.72269589234506,2.58457197695445,2.15471232685889,1.52018735565099,1.76421090831952,1.33038306393183,0.635030673459631,0,0,4.33277429626912,2.65975432573588,4.49172583777212,0,0,0,0,0,0,7.80560271448579,9.42805460341485,8.62669735159903,11.7358701652206,2.8343270329458,3.73466510648602,4.6663175777828,7.97922603264566,1.43752564364972,0,0,0,4.88792928468299,8.02293631828519,5.67239301505187,13.7575193384526,14.2827564403449,10.775133859605,6.43804610931351,7.11435836888911,4.04954872776629,0.988866362566974,2.8419204597844,3.59520132622086,1.92109152660777,13.2722703754851,13.095576018174,13.8814474491912,9.99778445413313,7.06779331045163,10.4117179332711,11.8848384062613,9.19218786610021,4.40463523997555,14.4286692036262,9.98442466165583,16.6176722540044,14.2720724019759,13.022834263919,9.49222196604695,8.4414391504752,12.3766580699216,5.59794312399969,9.5389026135399,11.5567656411686,3.02904773332736,3.85414956544606,12.1743085254705,3.44169550792555,0.679971333707751,3.2382191498269,5.19821133958135,1.34408066129201,3.65155492342555,7.15807354827843,7.27400812888033,12.3668851078619,6.05626705039726,15.3991772897181,48.4129955442627,63.9960032837998,3.030874574157,1.77351905832569,0.505524445014783,3.08296475241462,0.776813650941515,5.64080128446334,6.93941307064543,4.87144765299426,6.45723392316964,5.12456977878917,7.87844337809222,4.90099706185734,5.93267922562497,5.35017620603673,0,10.676612096529,4.63767188766826,4.363877278217,1.86391761218122,19.0307518057506,19.6879904404648,3.0654846625031,0,0,0,9.58660092190865,8.23501085073528,13.9476330845279,14.4274185759589,15.5986428971502,10.1816141834184,9.5722345209977,17.9237280376557,4.47865094196335,4.54900965180614,4.41927897361595,7.54698569183682,6.66716102857071,9.36323074987816,8.13806016312861,8.16437989815934,7.81493693737584,7.96464658757695,4.13925393182425,10.7783996466421,18.5323958564463,16.0115522989193,12.4941567483718,14.4584569597311,14.626590993931,14.1989674121481,14.3304672109315,0,0,0,7.87077935634907,5.8631514995274,9.54328925743379,8.04932100989715,8.26409773339096,6.94202007993202,4.88321283975857,6.70683503499048,8.4071046504362,5.43047504714485,8.37254066803386,7.1340552400353,9.0643992203706,4.61055242111206,5.2340503316545,11.7762371195911,15.7444056940305,2.64335026387038,3.70230793328962,10.8777007772969,12.5407802804637,10.5671318284117,9.07575860805041,10.0070119730192,8.3699275489526,4.74529061544512,7.90554982675252,8.29406189040889,7.56034593756373,8.77338392036041,1.79763881730844,2.80979464837102,3.18626037206988,7.58671603812327,8.22589290790047,5.63538678365402,8.34970444165788,5.43066964069352,8.6968416663995,6.9560190836683,3.83786384746966,5.18095801876537,4.56569506510662,2.07516838961004,2.50267658574141,1.37591296579242,1.12431056192427,2.43432145666204,1.92941727801933,2.29163266603278,3.45235364940973,2.2698931748505,1.37280706594041,2.87536413054709,3.34926852901653,6.24075346229121,3.03094653536534,3.94674309748207,2.41221760681684,9.60716588866344,7.95863929436036,10.1038285394056,6.78980343100753,7.97946844180907,10.887906733718,12.1402256851867,11.7080188714679,10.0886492227962,13.0664166892777,14.8292934851463,10.8149787712387,11.0518388394173,8.82359257347221,3.01582567878545,1.08781136763742,5.4094070032094,5.79467167239938,9.79358598925531,8.55645312123083,8.36068221421045,4.54447668967871,5.04813151066011,7.80877488593277,5.81643173878557,5.9742199488138,10.6943363559549,8.77537245445381,6.8817819284732,4.9683495844923,7.11518000303742,17.3513510867776,6.52924391958036,16.3820355373875,17.5917916101862,9.23832688646199,1.32745138339963,7.52619972080442,4.83717691143602,5.65815239267694,4.13422650033082,8.30074899448604,7.23599220871019,10.5424781548477,6.77345018930971,4.74055136903724,4.21674434299995,5.15677716240934,13.6175842301515,8.64293251350289,8.02023839453078,13.0745591369271,12.2364761213169,10.3453914209201,8.55654907131029,9.74287837166718,3.05073220482823,7.41412248023371,8.15955072803359,11.3771514529621,7.58882805470756,10.3135101627147,6.92359595218192,7.38634048852776,4.95517422270746,6.30446026835733,0,10.9385040020508,5.00025223898222,1.31857919903284,1.0935538217682,1.37266903923914,0.679913719975421,1.39951452323658,0.829199842826543,2.86401185404534,9.96458379780576,10.9792512248498,10.2605073780711,10.8725913927524,6.98760203987768,10.519419018016,11.1582165229204,6.02038666563268,2.98114438571124,4.97071450469541,3.94585057078933,8.37292657846281,7.94200754194069,12.8337784307071,14.9825395234168,13.685446164753,15.4911555012395,14.5828911025224,11.0102311646996,4.83168241652012,3.74439008135225,0,4.45995473638361,2.56777392912068,1.94881234466693,1.25318686967237,0.993406773906324,0.360586348559907,1.32920574457119,0.504832249740738,0.381034033274999,0.302478555410522,0,0.0962118416403295,0.116876902181569,3.40095575422817,2.88581739386284,0.986852422704233,2.68615386182526,10.0458588896739,5.2551093126331,6.77661009788881,6.00231461421384,4.51414893631827,11.2950368523413,13.3494318587081,13.1765968091061,11.1704568523397,17.8121455140367,22.661816921691,16.2005400055633,16.2115633160719,19.938265995305,15.0150490408028,11.2090335390911,6.78342284781753,11.0976843740187,9.96737539980005,7.54607385460736,11.7659845408009,13.1125569402953,10.7138229764225,8.02298023979538,8.84440241173291,9.37873409593887,9.80856975207596,9.45779225445812,12.0367286521154,10.6829972257441,12.859929664643,9.96605203125757,10.8029163459675,9.47797571847605,11.7759136107518,10.6289468239479,10.6485483695602,10.0143199777875,11.1916740806893,10.6343599869324,8.46146078916765,9.87811053512972,9.47050961176234,9.37048385536446,10.1005608898393,10.3212465768031,10.9339975436875,11.0492381655816,10.2258315182738,10.0311437710194,12.2407183189594,9.12333272937093,10.7435527024149,13.0076065806813,7.94129108830256,5.10109238364927
|phase1_expression=14.733693933641,1.74487703819681,2.27499619694768,5.44435580352294,6.01074875935617,5.54001597309236,3.03696432774183,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,6.63337663178344,0,0.261199789138935,1.91990907352088,0.68822784320151,1.72269589234506,2.58457197695445,2.15471232685889,1.52018735565099,1.76421090831952,1.33038306393183,0.635030673459631,0,0,4.33277429626912,2.65975432573588,4.49172583777212,0,0,0,0,0,0,7.80560271448579,9.42805460341485,8.62669735159903,11.7358701652206,2.8343270329458,3.73466510648602,4.6663175777828,7.97922603264566,1.43752564364972,0,0,0,4.88792928468299,8.02293631828519,5.67239301505187,13.7575193384526,14.2827564403449,10.775133859605,6.43804610931351,7.11435836888911,4.04954872776629,0.988866362566974,2.8419204597844,3.59520132622086,1.92109152660777,13.2722703754851,13.095576018174,13.8814474491912,9.99778445413313,7.06779331045163,10.4117179332711,11.8848384062613,9.19218786610021,4.40463523997555,14.4286692036262,9.98442466165583,16.6176722540044,14.2720724019759,13.022834263919,9.49222196604695,8.4414391504752,12.3766580699216,5.59794312399969,9.5389026135399,11.5567656411686,3.02904773332736,3.85414956544606,12.1743085254705,3.44169550792555,0.679971333707751,3.2382191498269,5.19821133958135,1.34408066129201,3.65155492342555,7.15807354827843,7.27400812888033,12.3668851078619,6.05626705039726,15.3991772897181,48.4129955442627,63.9960032837998,3.030874574157,1.77351905832569,0.505524445014783,3.08296475241462,0.776813650941515,5.64080128446334,6.93941307064543,4.87144765299426,6.45723392316964,5.12456977878917,7.87844337809222,4.90099706185734,5.93267922562497,5.35017620603673,0,10.676612096529,4.63767188766826,4.363877278217,1.86391761218122,19.0307518057506,19.6879904404648,3.0654846625031,0,0,0,9.58660092190865,8.23501085073528,13.9476330845279,14.4274185759589,15.5986428971502,10.1816141834184,9.5722345209977,17.9237280376557,4.47865094196335,4.54900965180614,4.41927897361595,7.54698569183682,6.66716102857071,9.36323074987816,8.13806016312861,8.16437989815934,7.81493693737584,7.96464658757695,4.13925393182425,10.7783996466421,18.5323958564463,16.0115522989193,12.4941567483718,14.4584569597311,14.626590993931,14.1989674121481,14.3304672109315,0,0,0,7.87077935634907,5.8631514995274,9.54328925743379,8.04932100989715,8.26409773339096,6.94202007993202,4.88321283975857,6.70683503499048,8.4071046504362,5.43047504714485,8.37254066803386,7.1340552400353,9.0643992203706,4.61055242111206,5.2340503316545,11.7762371195911,15.7444056940305,2.64335026387038,3.70230793328962,10.8777007772969,12.5407802804637,10.5671318284117,9.07575860805041,10.0070119730192,8.3699275489526,4.74529061544512,7.90554982675252,8.29406189040889,7.56034593756373,8.77338392036041,1.79763881730844,2.80979464837102,3.18626037206988,7.58671603812327,8.22589290790047,5.63538678365402,8.34970444165788,5.43066964069352,8.6968416663995,6.9560190836683,3.83786384746966,5.18095801876537,4.56569506510662,2.07516838961004,2.50267658574141,1.37591296579242,1.12431056192427,2.43432145666204,1.92941727801933,2.29163266603278,3.45235364940973,2.2698931748505,1.37280706594041,2.87536413054709,3.34926852901653,6.24075346229121,3.03094653536534,3.94674309748207,2.41221760681684,9.60716588866344,7.95863929436036,10.1038285394056,6.78980343100753,7.97946844180907,10.887906733718,12.1402256851867,11.7080188714679,10.0886492227962,13.0664166892777,14.8292934851463,10.8149787712387,11.0518388394173,8.82359257347221,3.01582567878545,1.08781136763742,5.4094070032094,5.79467167239938,9.79358598925531,8.55645312123083,8.36068221421045,4.54447668967871,5.04813151066011,7.80877488593277,5.81643173878557,5.9742199488138,10.6943363559549,8.77537245445381,6.8817819284732,4.9683495844923,7.11518000303742,17.3513510867776,6.52924391958036,16.3820355373875,17.5917916101862,9.23832688646199,1.32745138339963,7.52619972080442,4.83717691143602,5.65815239267694,4.13422650033082,8.30074899448604,7.23599220871019,10.5424781548477,6.77345018930971,4.74055136903724,4.21674434299995,5.15677716240934,13.6175842301515,8.64293251350289,8.02023839453078,13.0745591369271,12.2364761213169,10.3453914209201,8.55654907131029,9.74287837166718,3.05073220482823,7.41412248023371,8.15955072803359,11.3771514529621,7.58882805470756,10.3135101627147,6.92359595218192,7.38634048852776,4.95517422270746,6.30446026835733,0,10.9385040020508,5.00025223898222,1.31857919903284,1.0935538217682,1.37266903923914,0.679913719975421,1.39951452323658,0.829199842826543,2.86401185404534,9.96458379780576,10.9792512248498,10.2605073780711,10.8725913927524,6.98760203987768,10.519419018016,11.1582165229204,6.02038666563268,2.98114438571124,4.97071450469541,3.94585057078933,8.37292657846281,7.94200754194069,12.8337784307071,14.9825395234168,13.685446164753,15.4911555012395,14.5828911025224,11.0102311646996,4.83168241652012,3.74439008135225,0,4.45995473638361,2.56777392912068,1.94881234466693,1.25318686967237,0.993406773906324,0.360586348559907,1.32920574457119,0.504832249740738,0.381034033274999,0.302478555410522,0,0.0962118416403295,0.116876902181569,3.40095575422817,2.88581739386284,0.986852422704233,2.68615386182526,10.0458588896739,5.2551093126331,6.77661009788881,6.00231461421384,4.51414893631827,11.2950368523413,13.3494318587081,13.1765968091061,11.1704568523397,17.8121455140367,22.661816921691,16.2005400055633,16.2115633160719,19.938265995305,15.0150490408028,11.2090335390911,6.78342284781753,11.0976843740187,9.96737539980005,7.54607385460736,11.7659845408009,13.1125569402953,10.7138229764225,8.02298023979538,8.84440241173291,9.37873409593887,9.80856975207596,9.45779225445812,12.0367286521154,10.6829972257441,12.859929664643,9.96605203125757,10.8029163459675,9.47797571847605,11.7759136107518,10.6289468239479,10.6485483695602,10.0143199777875,11.1916740806893,10.6343599869324,8.46146078916765,9.87811053512972,9.47050961176234,9.37048385536446,10.1005608898393,10.3212465768031,10.9339975436875,11.0492381655816,10.2258315182738,10.0311437710194,12.2407183189594,9.12333272937093,10.7435527024149,13.0076065806813,7.94129108830256,5.10109238364927
|short_description=p3@Rbfox2
|short_description=p3@Rbfox2
}}
}}

Revision as of 05:25, 18 April 2012

Short description:p3@Rbfox2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rbfox2_5end
Coexpression cluster:NA
Association with transcript: 401bp_to_ENSMUST00000048145, ENSMUST00000171751, NM_001110827, NM_053104, NM_175387, uc007wng.2, uc007wnh.2, uc007wni.2_5end
EntrezGene:Rbfox2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rbfox2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.63
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C313.76
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.27
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.10
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.88
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.56
Mouse Schwann, donor1.CNhs12507.11728-123D93.03
Mouse Schwann, donor2.CNhs12573.11746-123F93.85
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.17
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.37
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I848.41
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B664.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.08
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D75.64
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I16.46
adrenal gland, embryo E18.CNhs11026.1262-18F55.12
adrenal gland, neonate N00.CNhs11191.1311-23C17.88
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A85.93
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F510.68
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B219.03
cerebellum, neonate N30.CNhs11135.1395-42I219.69
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.59
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F113.95
cortex, adult.CNhs10473.12-14D514.43
cortex, neonate N30.CNhs11107.1392-42F215.60
diencephalon, adult.CNhs10482.20-12F210.18
diencephalon, neonate N30.CNhs11201.1388-42B29.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.48
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C67.55
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C99.36
eyeball, embryo E17.CNhs11023.1261-18D48.14
eyeball, neonate N00.CNhs11207.633-15C68.16
eyeball, neonate N01.CNhs11140.1532-43E77.81
eyeball, neonate N02.CNhs11205.1551-44G87.96
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E210.78
forelimb, embryo E12.CNhs10600.359-14H218.53
forelimb, embryo E13.CNhs10589.384-1E216.01
forelimb, embryo E14.CNhs10577.413-26A812.49
forelimb, embryo E15.CNhs11007.437-20E714.46
forelimb, embryo E17.CNhs10598.1517-43C414.63
forelimb, embryo E18.CNhs11008.1520-43B514.20
gonad, embryo E13.CNhs11044.1564-45I614.33
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E97.87
heart, embryo E12.CNhs11015.353-12F55.86
heart, embryo E13.CNhs11013.376-3I99.54
heart, embryo E14.CNhs10597.403-26D48.05
heart, embryo E15.CNhs11017.431-16C88.26
heart, embryo E16.CNhs11021.457-17C66.94
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G36.71
heart, neonate N00.CNhs11213.639-21E38.41
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G18.37
heart, neonate N16.CNhs11209.782-15G17.13
heart, neonate N20.CNhs11127.821-26I69.06
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D25.23
hippocampus, adult.CNhs10478.13-16E811.78
hippocampus, neonate N00.CNhs11228.627-43G115.74
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I510.88
intestine, embryo E13.CNhs11010.381-16D512.54
intestine, embryo E15.CNhs10602.976-16D810.57
intestine, embryo E16.CNhs10585.463-22H49.08
intestine, embryo E17.CNhs10582.482-18D310.01
intestine, embryo E18.CNhs10526.1289-20F78.37
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E97.91
intestine, neonate N06.CNhs11102.688-20B88.29
intestine, neonate N07.CNhs11095.720-20F27.56
intestine, neonate N10.CNhs11098.755-23A58.77
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I97.59
kidney, embryo E15.CNhs10997.434-16F88.23
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I28.35
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G78.70
kidney, neonate N10.CNhs11206.758-6D56.96
kidney, neonate N20.CNhs11113.832-19I13.84
kidney, neonate N25.CNhs11122.1353-25F35.18
kidney, neonate N30.CNhs11203.1385-42H14.57
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B19.61
lung, embryo E12.CNhs10522.354-16G27.96
lung, embryo E14.CNhs10604.404-26F810.10
lung, embryo E15.CNhs11020.432-17C56.79
lung, embryo E16.CNhs10998.458-17B67.98
lung, embryo E17.CNhs10605.480-44A610.89
lung, embryo E18.CNhs10583.1287-20I612.14
lung, neonate N00.CNhs11224.640-42C611.71
lung, neonate N06.CNhs11212.683-20E510.09
lung, neonate N07.CNhs11111.715-19A313.07
lung, neonate N10.CNhs11219.750-23E614.83
lung, neonate N20.CNhs11109.822-18A410.81
lung, neonate N25.CNhs11119.1359-25C711.05
lung, neonate N30.CNhs11133.1394-42H28.82
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C29.79
medulla oblongata, neonate N30.CNhs11200.1396-42A38.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.36
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.97
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.78
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I917.35
ovary, adult.CNhs10507.91-2I76.53
ovary, embryo E18.CNhs11040.505-44H716.38
ovary, neonate N00.CNhs11217.1299-22I417.59
oviduct, adult pregnant day01.CNhs10500.988-6G69.24
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F47.53
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E55.66
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I78.30
pancreas, neonate N00.CNhs11105.645-26G97.24
pancreas, neonate N01.CNhs11138.1531-43D710.54
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G813.62
pituitary gland, embryo E12.CNhs11018.346-16E68.64
pituitary gland, embryo E13.CNhs11009.370-44C78.02
pituitary gland, embryo E14.CNhs11037.398-44A513.07
pituitary gland, embryo E15.CNhs10592.427-16B912.24
pituitary gland, embryo E16.CNhs11036.449-43F610.35
pituitary gland, embryo E17.CNhs11039.1265-44F58.56
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G37.41
prostate, adult.CNhs10470.859-1F88.16
skin, adult.CNhs10492.30-1C311.38
skin, neonate N00.CNhs11124.650-25G47.59
skin, neonate N03.CNhs11215.662-22H310.31
skin, neonate N06.CNhs11097.693-20I56.92
skin, neonate N10.CNhs11108.762-6C47.39
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C110.94
spleen, embryo E18.CNhs11011.1271-21F25.00
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E39.96
stomach, embryo E15.CNhs10603.1252-16G810.98
stomach, embryo E16.CNhs11022.459-17D410.26
stomach, embryo E17.CNhs11006.1035-18D510.87
stomach, embryo E18.CNhs10999.1286-20C66.99
stomach, neonate N03.CNhs11193.1340-24B810.52
stomach, neonate N07.CNhs11210.718-18A911.16
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F58.37
testis, embryo E15.CNhs11034.443-27C57.94
testis, embryo E16.CNhs11033.470-26G512.83
testis, embryo E17.CNhs11029.486-18I514.98
testis, embryo E18.CNhs11027.503-18G513.69
testis, neonate N00.CNhs11189.1300-22B715.49
testis, neonate N07.CNhs11222.726-26I414.58
testis, neonate N10.CNhs11204.763-44D911.01
testis, neonate N20.CNhs11110.839-18H34.83
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E410.05
uterus, adult pregnant day19.CNhs10497.590-15F55.26
uterus, adult.CNhs10509.92-27E56.78
vagina, adult.CNhs10502.89-27D56.00
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A522.66
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.94
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.02
whole body, embryo E11.CNhs11014.324-5I811.21
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H211.10
whole body, embryo E14.5.CNhs10578.420-27D29.97
whole body, embryo E14.CNhs10519.395-14B17.55
whole body, embryo E16.CNhs10514.453-14F211.77
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.02
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.84
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.81
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.80
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.46
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.37
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.23
whole body, embryo E17.5.CNhs10513.490-9F910.03
whole body, embryo E17.CNhs10517.475-3I512.24
whole body, embryo E18.CNhs10516.493-3B39.12
whole body, neonate N00.CNhs10525.657-19C210.74
whole body, neonate N01.CNhs10576.659-23C613.01
whole body, neonate N06.CNhs10515.692-21D17.94
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:77137042..77137081,-&oldid=828329"