FFCP PHASE1:Mm9::chr18:37966043..37966107,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 6: | Line 6: | ||
|description=CAGE_peak_1_at_Pcdhga11_5end,CAGE_peak_1_at_Pcdhga12_5end,CAGE_peak_1_at_Pcdhga3_5end,CAGE_peak_1_at_Pcdhga8_5end,CAGE_peak_1_at_Pcdhga9_5end,CAGE_peak_1_at_Pcdhgb6_5end,CAGE_peak_1_at_Pcdhgc3_5end,CAGE_peak_1_at_Pcdhgc4_5end,CAGE_peak_1_at_Pcdhgc5_5end | |description=CAGE_peak_1_at_Pcdhga11_5end,CAGE_peak_1_at_Pcdhga12_5end,CAGE_peak_1_at_Pcdhga3_5end,CAGE_peak_1_at_Pcdhga8_5end,CAGE_peak_1_at_Pcdhga9_5end,CAGE_peak_1_at_Pcdhgb6_5end,CAGE_peak_1_at_Pcdhgc3_5end,CAGE_peak_1_at_Pcdhgc4_5end,CAGE_peak_1_at_Pcdhgc5_5end | ||
|id=chr18:37966043..37966107,+ | |id=chr18:37966043..37966107,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.85e-20!50;CL:0002319!6.02e-17!43;CL:0000221!1.07e-16!44;CL:0000133!1.07e-16!44;CL:0000393!2.94e-14!39;CL:0000211!2.94e-14!39;CL:0000540!1.10e-10!33;CL:0000047!1.10e-10!33;CL:0000031!1.10e-10!33;CL:0000404!1.10e-10!33;CL:0002321!4.35e-10!70;CL:0000220!4.35e-10!70;CL:0000333!8.22e-08!10;CL:0000095!8.22e-08!10;CL:0000243!8.22e-08!10;CL:0000123!8.22e-08!10;CL:0000125!8.22e-08!10;CL:0000030!8.22e-08!10;CL:0000339!8.22e-08!10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|phase1_expression=60.3761153585073,1.39590163055744,0.909998478779072,0,0.500895729946347,5.70789524500425,5.60670337429262,1.03298658753261,2.81577444303333,3.04283884218592,0.68487187290202,0.319088635981346,0.342401459862411,0.437102012094987,0.999329285446988,0.404950534779652,0,0,0.274228867211478,0.42438965179803,28.6595887809105,0.992909512008853,0.522399578277871,2.3998863419011,2.75291137280604,0.57423196411502,1.7230479846363,1.72376986148711,2.66032787238923,2.01624103807945,3.76941868114018,0,0,0,3.17736781726402,1.82858109894342,1.42918549383658,0,0,0.523523743973798,0.588231488031014,0,0,237.189605065988,240.364703921469,145.18548095989,387.283715452279,226.964187792045,262.524988367694,209.206571403929,154.964968739276,218.503897834757,0.167782606057736,2.17608642603403,2.68875039313971,179.567086353091,160.745259805643,172.750150912943,56.2439761189682,70.8847912224524,51.9741750875067,230.075437274941,184.084022795006,38.6956878431002,38.565788140112,39.7868864369816,346.637327869794,473.356952156155,60.554733588151,80.733551122351,62.2561885600091,74.8405579137965,79.7335432835325,57.8156572294583,68.6253572490572,60.6684399162614,37.4393995397922,57.5869894764197,47.4644187761792,73.5925485534482,74.9283801103735,63.030517837368,50.5321228192499,36.5795696520592,53.6321849696604,67.1753174879962,55.6673271924492,62.630213797301,135.0955289064,173.210015764752,60.291813649949,37.858650587181,1.3599426674155,1.07940638327563,3.89865850468601,1.79210754838934,16.993774835942,156.284605804079,120.280920131128,125.435548951171,42.3938693527808,151.425243348895,155.431196221054,156.434674693733,16.0203370348298,13.6814327356553,17.6933555755174,12.2176751299394,9.32176381129818,61.6034877119023,47.8819501874535,43.8430288769483,35.284171080177,31.0488639538402,35.86455567639,69.8706247792996,12.6069433544531,100.785751773178,12.3845477272982,58.0742991311199,31.3594956213759,42.6690222758995,14.9113408974498,102.18049815703,113.101221679266,8.9409969323007,0.11981512450592,0,1.39777249780371,46.2853075760902,44.3775584734068,69.8638197747526,43.9775530086459,48.5859368927628,55.4794078974025,50.2947915510049,59.6778672162853,35.8292075357068,8.33985102831127,23.3590460033986,42.8096257347295,39.0833577536904,42.8547868936731,41.4438249048216,42.1826294738233,45.224143260552,47.6004760763422,37.7706921278963,66.6105098162483,73.3731591051139,78.6501525012851,65.5395239958449,65.6191508172411,58.506363975724,60.9115123767513,45.7778813682534,1.40442637462647,0.51469581422943,2.55747149456033,60.273599807831,50.1885768359546,51.1376254549282,60.1331628386434,51.3554644860724,51.6794828172717,40.460906386571,55.5325940897212,33.9787146288463,41.9627617279375,38.5793540585874,38.2644781056439,35.3803969569304,41.7145219052996,36.7725587403419,49.8387178096982,80.3685022682211,1.98251269790279,6.87571473325215,45.0038208629344,56.2012745902261,44.3304066948001,23.5969723809311,30.2434139629024,24.5391057685201,15.6594590309689,19.4344766574333,20.3581519128218,19.8956472041151,27.2949721966768,15.2799299471218,14.9135254413539,14.3381716743144,47.4169752382704,42.2719496655997,42.8289395557706,41.7485222082894,42.8634996640453,38.9955158590171,47.4906393803172,20.8130308651239,20.2528358915373,18.8797660800355,9.78293669387591,13.8481437744358,13.7591296579242,6.52100125916076,9.73728582664814,12.3000351473733,12.731292589071,14.3848068725405,14.4300351829781,11.8061407670875,18.6898668485561,26.4220072844637,17.4741096944154,14.1444171650383,10.4050499842709,8.20153986317724,76.1183143486411,64.9955542372763,85.8825425849476,81.9868764294159,84.7231796321493,96.1485917716022,101.168547376556,81.1755975088443,156.374062953341,155.025282754142,155.946763747022,98.4818521441585,104.301729047001,94.6004843123086,1.50791283939272,2.17562273527484,16.2282210096282,24.5583704211212,39.0137933670334,38.5626448888348,101.475731188162,38.6280518622691,118.00007406168,120.255133243365,161.998395095065,159.1532194364,177.124945895503,165.882847042256,174.068601720205,141.744091086986,162.858564513968,62.0150140694088,52.0920112714346,79.5953248392631,62.8743663104804,46.521574678255,7.96470830039777,29.6192376109077,26.9067965698628,16.0314317792513,32.1879063240042,28.2840336108413,26.6181141963268,25.0838273339479,25.3113138653152,21.1744627816997,11.5960469432499,15.470331487228,44.2571487479924,52.21771726908,67.9133089859461,58.2996735285931,72.3548153260476,84.7251883609835,67.6296474674717,74.2894475839622,26.0485595950719,17.7938939525609,6.61585194164886,34.6261131177108,46.178826035029,44.510938596979,39.2735011770319,27.7398120569154,20.9866202373493,45.6146242945854,3.58828849675491,56.1372280859965,30.3719024886327,9.04168593622517,4.51090951479383,4.34678529092393,0.509935289981566,1.6794174278839,1.10559979043539,9.54670618015114,49.8229189890288,45.5435606364141,36.5058051977688,37.2177166905754,30.3523963607187,31.4233927076632,39.7563122038866,26.699106082371,14.387262035389,16.1548221402601,1.12738587736838,65.3387306212187,55.2631358126706,52.890723229581,55.4095642719466,47.4766712629087,60.9084068571463,35.5457970623984,27.6828669283877,8.93861247056222,11.8092302565725,8.84831137758899,32.4360344464263,26.8075598200199,13.6416864126685,11.9947886097213,13.3116507703447,9.61563596159751,7.08909730437971,7.67345019605922,7.62068066549998,4.2346997757473,4.48306251402861,2.98256709085021,4.20756847853648,34.9164790767425,6.65957860122194,15.8793526198772,14.941730856403,41.1493835288566,27.9646888422261,35.5314151078494,33.4414671363343,9.02829787263654,54.7809287338555,52.4770769618182,58.4353423708185,51.5559547031063,45.900528824633,51.3667850224996,47.2515750162264,41.8798718998525,38.5171047636574,41.4208249401456,20.3423201264986,88.5835218950289,52.9274177837816,47.4058098283173,20.9613162627982,25.3704041661019,45.3383324715295,44.70960742084,41.719497246936,52.8137172586337,47.1471497795846,48.6655960776077,45.1352066004833,46.034084579101,46.0632461024018,50.9634249672889,44.1519281849899,44.9478483680433,44.0931913859538,50.1948317658295,46.9730875768019,43.8365241213564,47.2103656095695,51.8886707377413,49.0309871963873,43.9995961036718,44.4514974080837,35.5144110441088,49.7043056675854,43.7690971893036,47.0981021952971,47.5776649873971,42.5600284896477,46.4810523557898,51.3131585209836,76.6918474269494,55.6757228100072,51.9987950796882,53.3694446472073,59.3390917431497,55.1845448776603 | |phase1_expression=60.3761153585073,1.39590163055744,0.909998478779072,0,0.500895729946347,5.70789524500425,5.60670337429262,1.03298658753261,2.81577444303333,3.04283884218592,0.68487187290202,0.319088635981346,0.342401459862411,0.437102012094987,0.999329285446988,0.404950534779652,0,0,0.274228867211478,0.42438965179803,28.6595887809105,0.992909512008853,0.522399578277871,2.3998863419011,2.75291137280604,0.57423196411502,1.7230479846363,1.72376986148711,2.66032787238923,2.01624103807945,3.76941868114018,0,0,0,3.17736781726402,1.82858109894342,1.42918549383658,0,0,0.523523743973798,0.588231488031014,0,0,237.189605065988,240.364703921469,145.18548095989,387.283715452279,226.964187792045,262.524988367694,209.206571403929,154.964968739276,218.503897834757,0.167782606057736,2.17608642603403,2.68875039313971,179.567086353091,160.745259805643,172.750150912943,56.2439761189682,70.8847912224524,51.9741750875067,230.075437274941,184.084022795006,38.6956878431002,38.565788140112,39.7868864369816,346.637327869794,473.356952156155,60.554733588151,80.733551122351,62.2561885600091,74.8405579137965,79.7335432835325,57.8156572294583,68.6253572490572,60.6684399162614,37.4393995397922,57.5869894764197,47.4644187761792,73.5925485534482,74.9283801103735,63.030517837368,50.5321228192499,36.5795696520592,53.6321849696604,67.1753174879962,55.6673271924492,62.630213797301,135.0955289064,173.210015764752,60.291813649949,37.858650587181,1.3599426674155,1.07940638327563,3.89865850468601,1.79210754838934,16.993774835942,156.284605804079,120.280920131128,125.435548951171,42.3938693527808,151.425243348895,155.431196221054,156.434674693733,16.0203370348298,13.6814327356553,17.6933555755174,12.2176751299394,9.32176381129818,61.6034877119023,47.8819501874535,43.8430288769483,35.284171080177,31.0488639538402,35.86455567639,69.8706247792996,12.6069433544531,100.785751773178,12.3845477272982,58.0742991311199,31.3594956213759,42.6690222758995,14.9113408974498,102.18049815703,113.101221679266,8.9409969323007,0.11981512450592,0,1.39777249780371,46.2853075760902,44.3775584734068,69.8638197747526,43.9775530086459,48.5859368927628,55.4794078974025,50.2947915510049,59.6778672162853,35.8292075357068,8.33985102831127,23.3590460033986,42.8096257347295,39.0833577536904,42.8547868936731,41.4438249048216,42.1826294738233,45.224143260552,47.6004760763422,37.7706921278963,66.6105098162483,73.3731591051139,78.6501525012851,65.5395239958449,65.6191508172411,58.506363975724,60.9115123767513,45.7778813682534,1.40442637462647,0.51469581422943,2.55747149456033,60.273599807831,50.1885768359546,51.1376254549282,60.1331628386434,51.3554644860724,51.6794828172717,40.460906386571,55.5325940897212,33.9787146288463,41.9627617279375,38.5793540585874,38.2644781056439,35.3803969569304,41.7145219052996,36.7725587403419,49.8387178096982,80.3685022682211,1.98251269790279,6.87571473325215,45.0038208629344,56.2012745902261,44.3304066948001,23.5969723809311,30.2434139629024,24.5391057685201,15.6594590309689,19.4344766574333,20.3581519128218,19.8956472041151,27.2949721966768,15.2799299471218,14.9135254413539,14.3381716743144,47.4169752382704,42.2719496655997,42.8289395557706,41.7485222082894,42.8634996640453,38.9955158590171,47.4906393803172,20.8130308651239,20.2528358915373,18.8797660800355,9.78293669387591,13.8481437744358,13.7591296579242,6.52100125916076,9.73728582664814,12.3000351473733,12.731292589071,14.3848068725405,14.4300351829781,11.8061407670875,18.6898668485561,26.4220072844637,17.4741096944154,14.1444171650383,10.4050499842709,8.20153986317724,76.1183143486411,64.9955542372763,85.8825425849476,81.9868764294159,84.7231796321493,96.1485917716022,101.168547376556,81.1755975088443,156.374062953341,155.025282754142,155.946763747022,98.4818521441585,104.301729047001,94.6004843123086,1.50791283939272,2.17562273527484,16.2282210096282,24.5583704211212,39.0137933670334,38.5626448888348,101.475731188162,38.6280518622691,118.00007406168,120.255133243365,161.998395095065,159.1532194364,177.124945895503,165.882847042256,174.068601720205,141.744091086986,162.858564513968,62.0150140694088,52.0920112714346,79.5953248392631,62.8743663104804,46.521574678255,7.96470830039777,29.6192376109077,26.9067965698628,16.0314317792513,32.1879063240042,28.2840336108413,26.6181141963268,25.0838273339479,25.3113138653152,21.1744627816997,11.5960469432499,15.470331487228,44.2571487479924,52.21771726908,67.9133089859461,58.2996735285931,72.3548153260476,84.7251883609835,67.6296474674717,74.2894475839622,26.0485595950719,17.7938939525609,6.61585194164886,34.6261131177108,46.178826035029,44.510938596979,39.2735011770319,27.7398120569154,20.9866202373493,45.6146242945854,3.58828849675491,56.1372280859965,30.3719024886327,9.04168593622517,4.51090951479383,4.34678529092393,0.509935289981566,1.6794174278839,1.10559979043539,9.54670618015114,49.8229189890288,45.5435606364141,36.5058051977688,37.2177166905754,30.3523963607187,31.4233927076632,39.7563122038866,26.699106082371,14.387262035389,16.1548221402601,1.12738587736838,65.3387306212187,55.2631358126706,52.890723229581,55.4095642719466,47.4766712629087,60.9084068571463,35.5457970623984,27.6828669283877,8.93861247056222,11.8092302565725,8.84831137758899,32.4360344464263,26.8075598200199,13.6416864126685,11.9947886097213,13.3116507703447,9.61563596159751,7.08909730437971,7.67345019605922,7.62068066549998,4.2346997757473,4.48306251402861,2.98256709085021,4.20756847853648,34.9164790767425,6.65957860122194,15.8793526198772,14.941730856403,41.1493835288566,27.9646888422261,35.5314151078494,33.4414671363343,9.02829787263654,54.7809287338555,52.4770769618182,58.4353423708185,51.5559547031063,45.900528824633,51.3667850224996,47.2515750162264,41.8798718998525,38.5171047636574,41.4208249401456,20.3423201264986,88.5835218950289,52.9274177837816,47.4058098283173,20.9613162627982,25.3704041661019,45.3383324715295,44.70960742084,41.719497246936,52.8137172586337,47.1471497795846,48.6655960776077,45.1352066004833,46.034084579101,46.0632461024018,50.9634249672889,44.1519281849899,44.9478483680433,44.0931913859538,50.1948317658295,46.9730875768019,43.8365241213564,47.2103656095695,51.8886707377413,49.0309871963873,43.9995961036718,44.4514974080837,35.5144110441088,49.7043056675854,43.7690971893036,47.0981021952971,47.5776649873971,42.5600284896477,46.4810523557898,51.3131585209836,76.6918474269494,55.6757228100072,51.9987950796882,53.3694446472073,59.3390917431497,55.1845448776603 | ||
|short_description=p1@Pcdhga11,p1@Pcdhga12,p1@Pcdhga3,p1@Pcdhga8,p1@Pcdhga9,p1@Pcdhgb6,p1@Pcdhgc3,p1@Pcdhgc4,p1@Pcdhgc5 | |short_description=p1@Pcdhga11,p1@Pcdhga12,p1@Pcdhga3,p1@Pcdhga8,p1@Pcdhga9,p1@Pcdhgb6,p1@Pcdhgc3,p1@Pcdhgc4,p1@Pcdhgc5 | ||
}} | }} |
Revision as of 09:22, 18 April 2012
Short description: | p1@Pcdhga11, p1@Pcdhga12, p1@Pcdhga3, p1@Pcdhga8, p1@Pcdhga9, p1@Pcdhgb6, p1@Pcdhgc3, p1@Pcdhgc4, p1@Pcdhgc5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcdhga11_5end, CAGE_peak_1_at_Pcdhga12_5end, CAGE_peak_1_at_Pcdhga3_5end, CAGE_peak_1_at_Pcdhga8_5end, CAGE_peak_1_at_Pcdhga9_5end, CAGE_peak_1_at_Pcdhgb6_5end, CAGE_peak_1_at_Pcdhgc3_5end, CAGE_peak_1_at_Pcdhgc4_5end, CAGE_peak_1_at_Pcdhgc5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000076807, NM_033581, uc008ere.1, uc012bcb.1_5end |
EntrezGene: | 93703,93706,93707,93708,93711,93716,93717,93723,93724 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.