Personal tools

FFCP PHASE1:Mm9::chr19:12576572..12576642,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Dtx4_5end
|description=CAGE_peak_1_at_Dtx4_5end
|id=chr19:12576572..12576642,-
|id=chr19:12576572..12576642,-
|ontology_enrichment_celltype=CL:0000540!5.58e-16!33;CL:0000047!5.58e-16!33;CL:0000031!5.58e-16!33;CL:0000404!5.58e-16!33;CL:0000117!5.33e-14!23;CL:0000337!5.33e-14!23;CL:0000393!6.52e-14!39;CL:0000211!6.52e-14!39;CL:0002319!7.32e-14!43;CL:0000221!1.16e-13!44;CL:0000133!1.16e-13!44;CL:0000055!1.52e-11!50
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=2.08193501236232,1.39590163055744,2.72999543633722,2.11724947914781,1.00179145989269,8.89760141133016,5.84031601488814,1.80772652818207,0.281577444303333,0,0.171217968225505,0.0797721589953364,1.02720437958723,0.699363219351979,0,0.607425802169478,0,0.630924330716475,1.23402990245165,1.27316895539409,6.4632900514813,2.18440092641948,1.04479915655574,3.83981814704176,2.52350209173887,0,1.29228598847722,4.52489588640367,0.950117097281869,0.252030129759931,1.77384408524244,0,0,0,4.04392267651784,2.99222361645286,2.6542016314108,2.51118978442145,0.7813353445238,1.57057123192139,2.35292595212406,1.36609096991689,1.45653105909346,4.65818226509636,3.85232338634155,1.46837401729345,0,11.1192829754028,8.12838876117546,7.97162586204562,6.99932108126813,15.8127820801469,0.671130424230945,0.725362142011344,0,6.17422646486273,15.1862723167541,3.09403255366465,45.5212036934095,38.6163414868584,36.7622214033584,4.40497891689872,2.66788438833342,8.09909745553259,10.8775299882367,2.1314403448383,7.19040265244171,7.30014780110954,9.02099627083756,12.9605700798423,7.99234853135252,26.5655415495537,21.8659855542097,11.3916443269907,14.5685115947719,11.9498442259303,20.9220173898839,13.2794831608595,20.4296689230804,47.2152910074094,51.599030991759,52.091337055676,11.725685958058,19.1339287410771,14.0574387954665,26.5165726926301,31.6065131374009,33.1791013569035,1.06016670666458,1.51143120213571,1.73918693221007,0,0.679971333707751,4.85732872474035,3.24888208723835,0.896053774194671,3.65155492342555,2.38602451609281,1.03914401841148,1.7666978725517,5.0703631119605,6.41632387071589,2.54805239706646,0,0.649473123033642,1.01343946190039,1.01104889002957,4.33898742932428,3.88406825470758,3.26572705942614,2.77576522825817,2.13125834818499,5.30415643688935,4.82312449768392,7.87844337809222,6.03199638382442,0,5.35017620603673,1.76922110389975,5.3383060482645,3.3126227769059,6.30337829075789,3.72783522436244,7.61230072230023,9.21565509979202,3.57639877292028,3.11519323715393,0.599902730993408,3.04968544975355,11.6836698735762,7.77751024791665,10.9319286338192,6.95297280769106,10.2286182932132,11.0127663616567,10.3834408363365,15.4795833052481,5.72272064806428,3.28539585963777,4.62972082950243,15.354212269599,10.3455946995063,17.4660265911189,18.2352829581215,18.0977087742532,18.9608306021578,12.7434345401231,7.24369438069244,0.862271971731369,1.70195472151037,2.11141348996739,2.84954452155847,7.50727572909114,8.358051996532,9.26019613835746,5.57295947091781,3.51106593656617,2.83082697826187,2.55747149456033,1.03562886267751,1.64168241986767,2.16074473753218,2.13070262026689,1.57411385397923,3.85667782218446,0.930135779001631,2.14618721119695,2.80236821681207,2.96207729844265,4.76085645829376,4.70199095365963,4.38599962275997,3.51280184465681,6.03928884421673,10.0939175310781,25.1087254205454,1.98251269790279,2.3800550999719,12.3707185310436,16.2565670302307,12.6290112095651,8.26902450955704,6.67134131534611,4.56541502670142,3.79623249235609,5.92916237006439,5.02670417600539,6.56556357735798,6.82374304916921,7.19055526923377,3.6743468478698,3.98282546508734,2.65535061334314,3.42745537829186,2.25415471346161,2.44381593414377,2.32742984601151,4.69909993265134,2.65593455921881,3.54264355151045,3.29697328466887,2.83813477020141,0.592905254174298,2.33583148002532,2.55526693647164,1.79889689907883,2.63718157805054,3.61765739628625,1.52775511068852,2.30156909960649,2.59416362840057,1.64736847912849,5.75072826109418,4.09355042435354,4.99260276983297,3.78868316920668,4.4849353380478,1.4473305640901,3.14080423283228,3.03186258832776,5.54080919902888,4.75286240170527,6.57132695207806,5.52770649557992,5.47500374037832,5.07347484430277,6.77831119656621,7.30833475840957,7.81328366421687,3.27726629431476,8.97961905702657,8.96824163205372,9.04747703635634,5.98296252200581,3.44234991113325,1.65562047782839,8.34863067936518,10.0802050469295,3.44263385291018,4.79694761688309,9.78075480190396,8.98009111882268,9.04778270477756,10.7535959078648,13.590719119026,13.0215204162863,7.69140333182299,12.5670018901864,13.8350722281283,4.81981974632711,8.09058485687131,9.08134578703002,6.18970445543589,5.27904393512113,6.63725691699814,4.85561272309963,3.62788268357701,5.84675747243284,2.06711325016541,3.07435147943927,3.87642439752332,4.36240475373007,4.63446591900138,2.84433082142234,4.21674434299995,6.18813259489121,3.74483566329167,10.443543453816,5.82114077022395,4.07240366560025,4.25616560741457,6.24290861607247,6.91105886528908,3.65357938937519,1.64270195644597,0.847328283455281,0.661585194164886,6.10079135883476,6.45857706783622,5.42816324353403,2.26807453605959,1.80554989719567,4.08073171281791,10.9400928186201,1.36696704638282,5.15967169908056,4.25947412950337,1.69531611304222,1.77702496037333,1.37266903923914,0.509935289981566,0.559805809294632,0.552799895217695,1.90934123603023,8.22473583310952,7.1161813494397,9.72048067396211,7.94535524854981,7.42432716737004,4.85511646985355,7.10819719237889,5.75863072364865,3.49960427887841,3.10669656543463,2.81846469342095,8.37292657846281,9.26567546559747,16.5283510092441,13.432621641684,16.726656423587,17.0167996036343,13.020438484395,8.91304427618542,4.59009829569411,4.60848010012585,0.632022241256357,1.82452693761148,2.67048488628551,2.33857481360031,1.61124026100733,1.98681354781265,0.841368146639782,2.36303243479324,0.908698049533329,1.21930890648,0.604957110821043,0.974578807397524,0.577271049841977,0.467507608726276,3.62768613784338,0.887943813496259,1.25599399253266,0.671538465456314,9.27310051354514,1.87682475451182,6.41030684935428,1.92931541171159,4.01257683228291,11.2950368523413,7.82552902062201,12.0308057822273,7.56154002312225,6.85082519770642,6.0431511791176,9.45031500324528,5.85417564191487,8.15656336171568,11.9084871702919,16.9173376562208,9.97562183502578,5.9756762013947,9.23805524859517,8.80375283037526,9.19217542250071,10.4455962066759,8.24140228955577,8.02298023979538,9.09709962349671,10.3926512954998,9.43131706930381,9.83235828433765,9.15559679389631,10.5106908188772,9.0495801343784,8.22778714208474,8.29509647993932,11.9504911232959,9.71512872887022,13.3719008430312,10.2935967572416,11.6833733074187,9.44751708110135,9.69326618277905,10.1537529470012,7.50004688778368,8.94437018888666,9.77789619690205,9.53941861818155,9.84670650430645,7.78185410766951,11.867700251921,8.98633678878603,7.13754460630223,10.4920442733937,7.01794825336225,6.87587372954555,5.7386499620653,3.08827986767322,4.63735671240843
|phase1_expression=2.08193501236232,1.39590163055744,2.72999543633722,2.11724947914781,1.00179145989269,8.89760141133016,5.84031601488814,1.80772652818207,0.281577444303333,0,0.171217968225505,0.0797721589953364,1.02720437958723,0.699363219351979,0,0.607425802169478,0,0.630924330716475,1.23402990245165,1.27316895539409,6.4632900514813,2.18440092641948,1.04479915655574,3.83981814704176,2.52350209173887,0,1.29228598847722,4.52489588640367,0.950117097281869,0.252030129759931,1.77384408524244,0,0,0,4.04392267651784,2.99222361645286,2.6542016314108,2.51118978442145,0.7813353445238,1.57057123192139,2.35292595212406,1.36609096991689,1.45653105909346,4.65818226509636,3.85232338634155,1.46837401729345,0,11.1192829754028,8.12838876117546,7.97162586204562,6.99932108126813,15.8127820801469,0.671130424230945,0.725362142011344,0,6.17422646486273,15.1862723167541,3.09403255366465,45.5212036934095,38.6163414868584,36.7622214033584,4.40497891689872,2.66788438833342,8.09909745553259,10.8775299882367,2.1314403448383,7.19040265244171,7.30014780110954,9.02099627083756,12.9605700798423,7.99234853135252,26.5655415495537,21.8659855542097,11.3916443269907,14.5685115947719,11.9498442259303,20.9220173898839,13.2794831608595,20.4296689230804,47.2152910074094,51.599030991759,52.091337055676,11.725685958058,19.1339287410771,14.0574387954665,26.5165726926301,31.6065131374009,33.1791013569035,1.06016670666458,1.51143120213571,1.73918693221007,0,0.679971333707751,4.85732872474035,3.24888208723835,0.896053774194671,3.65155492342555,2.38602451609281,1.03914401841148,1.7666978725517,5.0703631119605,6.41632387071589,2.54805239706646,0,0.649473123033642,1.01343946190039,1.01104889002957,4.33898742932428,3.88406825470758,3.26572705942614,2.77576522825817,2.13125834818499,5.30415643688935,4.82312449768392,7.87844337809222,6.03199638382442,0,5.35017620603673,1.76922110389975,5.3383060482645,3.3126227769059,6.30337829075789,3.72783522436244,7.61230072230023,9.21565509979202,3.57639877292028,3.11519323715393,0.599902730993408,3.04968544975355,11.6836698735762,7.77751024791665,10.9319286338192,6.95297280769106,10.2286182932132,11.0127663616567,10.3834408363365,15.4795833052481,5.72272064806428,3.28539585963777,4.62972082950243,15.354212269599,10.3455946995063,17.4660265911189,18.2352829581215,18.0977087742532,18.9608306021578,12.7434345401231,7.24369438069244,0.862271971731369,1.70195472151037,2.11141348996739,2.84954452155847,7.50727572909114,8.358051996532,9.26019613835746,5.57295947091781,3.51106593656617,2.83082697826187,2.55747149456033,1.03562886267751,1.64168241986767,2.16074473753218,2.13070262026689,1.57411385397923,3.85667782218446,0.930135779001631,2.14618721119695,2.80236821681207,2.96207729844265,4.76085645829376,4.70199095365963,4.38599962275997,3.51280184465681,6.03928884421673,10.0939175310781,25.1087254205454,1.98251269790279,2.3800550999719,12.3707185310436,16.2565670302307,12.6290112095651,8.26902450955704,6.67134131534611,4.56541502670142,3.79623249235609,5.92916237006439,5.02670417600539,6.56556357735798,6.82374304916921,7.19055526923377,3.6743468478698,3.98282546508734,2.65535061334314,3.42745537829186,2.25415471346161,2.44381593414377,2.32742984601151,4.69909993265134,2.65593455921881,3.54264355151045,3.29697328466887,2.83813477020141,0.592905254174298,2.33583148002532,2.55526693647164,1.79889689907883,2.63718157805054,3.61765739628625,1.52775511068852,2.30156909960649,2.59416362840057,1.64736847912849,5.75072826109418,4.09355042435354,4.99260276983297,3.78868316920668,4.4849353380478,1.4473305640901,3.14080423283228,3.03186258832776,5.54080919902888,4.75286240170527,6.57132695207806,5.52770649557992,5.47500374037832,5.07347484430277,6.77831119656621,7.30833475840957,7.81328366421687,3.27726629431476,8.97961905702657,8.96824163205372,9.04747703635634,5.98296252200581,3.44234991113325,1.65562047782839,8.34863067936518,10.0802050469295,3.44263385291018,4.79694761688309,9.78075480190396,8.98009111882268,9.04778270477756,10.7535959078648,13.590719119026,13.0215204162863,7.69140333182299,12.5670018901864,13.8350722281283,4.81981974632711,8.09058485687131,9.08134578703002,6.18970445543589,5.27904393512113,6.63725691699814,4.85561272309963,3.62788268357701,5.84675747243284,2.06711325016541,3.07435147943927,3.87642439752332,4.36240475373007,4.63446591900138,2.84433082142234,4.21674434299995,6.18813259489121,3.74483566329167,10.443543453816,5.82114077022395,4.07240366560025,4.25616560741457,6.24290861607247,6.91105886528908,3.65357938937519,1.64270195644597,0.847328283455281,0.661585194164886,6.10079135883476,6.45857706783622,5.42816324353403,2.26807453605959,1.80554989719567,4.08073171281791,10.9400928186201,1.36696704638282,5.15967169908056,4.25947412950337,1.69531611304222,1.77702496037333,1.37266903923914,0.509935289981566,0.559805809294632,0.552799895217695,1.90934123603023,8.22473583310952,7.1161813494397,9.72048067396211,7.94535524854981,7.42432716737004,4.85511646985355,7.10819719237889,5.75863072364865,3.49960427887841,3.10669656543463,2.81846469342095,8.37292657846281,9.26567546559747,16.5283510092441,13.432621641684,16.726656423587,17.0167996036343,13.020438484395,8.91304427618542,4.59009829569411,4.60848010012585,0.632022241256357,1.82452693761148,2.67048488628551,2.33857481360031,1.61124026100733,1.98681354781265,0.841368146639782,2.36303243479324,0.908698049533329,1.21930890648,0.604957110821043,0.974578807397524,0.577271049841977,0.467507608726276,3.62768613784338,0.887943813496259,1.25599399253266,0.671538465456314,9.27310051354514,1.87682475451182,6.41030684935428,1.92931541171159,4.01257683228291,11.2950368523413,7.82552902062201,12.0308057822273,7.56154002312225,6.85082519770642,6.0431511791176,9.45031500324528,5.85417564191487,8.15656336171568,11.9084871702919,16.9173376562208,9.97562183502578,5.9756762013947,9.23805524859517,8.80375283037526,9.19217542250071,10.4455962066759,8.24140228955577,8.02298023979538,9.09709962349671,10.3926512954998,9.43131706930381,9.83235828433765,9.15559679389631,10.5106908188772,9.0495801343784,8.22778714208474,8.29509647993932,11.9504911232959,9.71512872887022,13.3719008430312,10.2935967572416,11.6833733074187,9.44751708110135,9.69326618277905,10.1537529470012,7.50004688778368,8.94437018888666,9.77789619690205,9.53941861818155,9.84670650430645,7.78185410766951,11.867700251921,8.98633678878603,7.13754460630223,10.4920442733937,7.01794825336225,6.87587372954555,5.7386499620653,3.08827986767322,4.63735671240843
|short_description=p1@Dtx4
|short_description=p1@Dtx4
}}
}}

Revision as of 10:10, 18 April 2012

Short description:p1@Dtx4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dtx4_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_uc008gud.1_5end
EntrezGene:Dtx4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dtx4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.85
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.12
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.13
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.19
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C345.52
Mouse Granule cells, donor2.CNhs12357.11731-123E338.62
Mouse Granule cells, donor3.CNhs12108.11636-122C736.76
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.02
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.96
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F126.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D447.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F451.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D852.09
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D626.52
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F631.61
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E133.18
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.34
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F54.82
adrenal gland, neonate N00.CNhs11191.1311-23C17.88
adrenal gland, neonate N25.CNhs11223.1377-27I36.03
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F55.34
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I29.22
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A411.68
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F110.93
cortex, adult.CNhs10473.12-14D56.95
cortex, neonate N30.CNhs11107.1392-42F210.23
diencephalon, adult.CNhs10482.20-12F211.01
diencephalon, neonate N30.CNhs11201.1388-42B210.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.48
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.72
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C615.35
eyeball, embryo E14.CNhs10521.399-16E210.35
eyeball, embryo E15.CNhs10593.426-16C917.47
eyeball, embryo E17.CNhs11023.1261-18D418.24
eyeball, neonate N00.CNhs11207.633-15C618.10
eyeball, neonate N01.CNhs11140.1532-43E718.96
eyeball, neonate N02.CNhs11205.1551-44G812.74
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C48.36
forelimb, embryo E18.CNhs11008.1520-43B59.26
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E32.80
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G14.76
heart, neonate N16.CNhs11209.782-15G14.70
heart, neonate N20.CNhs11127.821-26I64.39
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D26.04
hippocampus, adult.CNhs10478.13-16E810.09
hippocampus, neonate N00.CNhs11228.627-43G125.11
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I512.37
intestine, embryo E13.CNhs11010.381-16D516.26
intestine, embryo E15.CNhs10602.976-16D812.63
intestine, embryo E16.CNhs10585.463-22H48.27
intestine, embryo E17.CNhs10582.482-18D36.67
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E95.93
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F26.57
intestine, neonate N10.CNhs11098.755-23A56.82
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G74.70
kidney, neonate N10.CNhs11206.758-6D52.66
kidney, neonate N20.CNhs11113.832-19I13.54
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H12.84
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H14.48
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F85.54
lung, embryo E15.CNhs11020.432-17C54.75
lung, embryo E16.CNhs10998.458-17B66.57
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C65.07
lung, neonate N06.CNhs11212.683-20E56.78
lung, neonate N07.CNhs11111.715-19A37.31
lung, neonate N10.CNhs11219.750-23E67.81
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C78.98
lung, neonate N30.CNhs11133.1394-42H28.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C28.35
medulla oblongata, neonate N30.CNhs11200.1396-42A310.08
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.44
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.78
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.05
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D813.59
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.02
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.57
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.84
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I78.09
ovary, embryo E18.CNhs11040.505-44H79.08
ovary, neonate N00.CNhs11217.1299-22I46.19
oviduct, adult pregnant day01.CNhs10500.988-6G65.28
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E610.44
pituitary gland, embryo E13.CNhs11009.370-44C75.82
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B94.26
pituitary gland, embryo E16.CNhs11036.449-43F66.24
pituitary gland, embryo E17.CNhs11039.1265-44F56.91
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C36.10
skin, neonate N00.CNhs11124.650-25G46.46
skin, neonate N03.CNhs11215.662-22H35.43
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C910.94
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F24.26
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E38.22
stomach, embryo E15.CNhs10603.1252-16G87.12
stomach, embryo E16.CNhs11022.459-17D49.72
stomach, embryo E17.CNhs11006.1035-18D57.95
stomach, embryo E18.CNhs10999.1286-20C67.42
stomach, neonate N03.CNhs11193.1340-24B84.86
stomach, neonate N07.CNhs11210.718-18A97.11
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I13.50
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F58.37
testis, embryo E15.CNhs11034.443-27C59.27
testis, embryo E16.CNhs11033.470-26G516.53
testis, embryo E17.CNhs11029.486-18I513.43
testis, embryo E18.CNhs11027.503-18G516.73
testis, neonate N00.CNhs11189.1300-22B717.02
testis, neonate N07.CNhs11222.726-26I413.02
testis, neonate N10.CNhs11204.763-44D98.91
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D31.22
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E49.27
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I816.92
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H25.98
whole body, embryo E14.5.CNhs10578.420-27D29.24
whole body, embryo E14.CNhs10519.395-14B18.80
whole body, embryo E16.CNhs10514.453-14F29.19
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.02
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.10
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.39
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.43
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.83
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.51
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.50
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.99
whole body, embryo E17.5.CNhs10513.490-9F97.14
whole body, embryo E17.CNhs10517.475-3I510.49
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C26.88
whole body, neonate N01.CNhs10576.659-23C65.74
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:12576572..12576642,-&oldid=865214"