DOID:171: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{DOID
|id=DOID:171
|name=neuroectodermal tumor
|namespace=
|def=
|xref=
|is_a=DOID:3095
|synonym="Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:253096008];;"Neuro...") |
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|id=DOID:171 | |id=DOID:171 | ||
|name=neuroectodermal tumor | |name=neuroectodermal tumor | ||
|namespace= | |namespace=disease_ontology | ||
|def= | |def= | ||
|xref= | |xref=MSH:D017599;;NCI:C3716;;SNOMEDCT_2010_1_31:253096008;;SNOMEDCT_2010_1_31:73676002;;UMLS_CUI:C0206093 | ||
|is_a=DOID:3095 | |is_a=DOID:3095 | ||
|synonym="Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:253096008];;"Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:73676002];;"primitive Neuroectodermal neoplasm" EXACT [NCI2004_11_17:C3716] | |synonym="Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:253096008];;"Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:73676002];;"primitive Neuroectodermal neoplasm" EXACT [NCI2004_11_17:C3716] | ||
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|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |||
|is_obsolete= | |||
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}} | }} | ||
Revision as of 13:59, 11 June 2012
| Name: | neuroectodermal tumor | ||
|---|---|---|---|
| Namespace: | disease_ontology | ||
| Xrefs: |
| ||
| Synonyms: |
"Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:253096008] "Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:73676002] "primitive Neuroectodermal neoplasm" EXACT [NCI2004_11_17:C3716] |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:3095(germ cell and embryonal cancer) |
|---|
Children
| is a: | FF:10637-108I7 (neuroectodermal tumor cell line:FU-RPNT-1),FF:10663-109C6 (neuroectodermal tumor cell line:FU-RPNT-2),FF:10697-109G4 (peripheral neuroectodermal tumor cell line:KU-SN),FF:10774-110F9 (neuroectodermal tumor cell line:TASK1),DOID:169 (neuroendocrine tumor) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10458-106G8
- 10460-106H1
- 10461-106H2
- 10480-107A3
- 10507-107D3
- 10508-107D4 (neuroblastoma cell line:CHP-134)
- 10538-107G7
- 10539-107G8 (neuroblastoma cell line:NB-1)
- 10554-107I5
- 10555-107I6 (neuroblastoma cell line:NH-12)
... further results Mouse (Mus musculus)
- 10458-106G8
- 10460-106H1
- 10461-106H2
- 10480-107A3
- 10507-107D3
- 10508-107D4 (neuroblastoma cell line:CHP-134)
- 10538-107G7
- 10539-107G8 (neuroblastoma cell line:NB-1)
- 10554-107I5
- 10555-107I6 (neuroblastoma cell line:NH-12)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:171 (neuroectodermal tumor), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.05e-156 | FFCP PHASE1:Hg19::chr2:218875465..218875482,-#_5900da959f1bf09a7b5ac40467223f54 | p@chr2:218875465..218875482, - |
| 2.05e-156 | FFCP PHASE2:Hg19::chr2:218875465..218875482,-#_5900da959f1bf09a7b5ac40467223f54 | p@chr2:218875465..218875482, - |
| 3.56e-120 | FFCP PHASE2:Hg19::chr2:218875447..218875463,-#_d1266b32993bac906a7dbe641da18af8 | p@chr2:218875447..218875463, - |
| 3.56e-120 | FFCP PHASE1:Hg19::chr2:218875447..218875463,-#_d1266b32993bac906a7dbe641da18af8 | p@chr2:218875447..218875463, - |
| 1.29e-117 | FFCP PHASE1:Hg19::chr13:31590717..31590730,-#_0b6a654a655c1e7282b4cd05f448b1fc | p@chr13:31590717..31590730, - |
| 1.29e-117 | FFCP PHASE1:Hg19::chr8:12808720..12808732,+#_0b6a654a655c1e7282b4cd05f448b1fc | p19@KIAA1456 |
| 1.29e-117 | FFCP PHASE2:Hg19::chr13:31590717..31590730,-#_0b6a654a655c1e7282b4cd05f448b1fc | p@chr13:31590717..31590730, - |
| 1.29e-117 | FFCP PHASE2:Hg19::chr8:12808720..12808732,+#_0b6a654a655c1e7282b4cd05f448b1fc | p19@KIAA1456 |
| 6.02e-101 | FFCP PHASE2:Hg19::chrX:51361761..51361770,-#_21bbb193c2d492fe50b638fe5ef1d049 | p2@ENST00000417339 |
| 6.02e-101 | FFCP PHASE1:Hg19::chr3:5932149..5932178,+#_21bbb193c2d492fe50b638fe5ef1d049 | p@chr3:5932149..5932178, + |
| 6.02e-101 | FFCP PHASE2:Hg19::chr3:5932149..5932178,+#_21bbb193c2d492fe50b638fe5ef1d049 | p@chr3:5932149..5932178, + |
| 6.02e-101 | FFCP PHASE1:Hg19::chrX:51361761..51361770,-#_21bbb193c2d492fe50b638fe5ef1d049 | p2@ENST00000417339 |
| 7.16e-101 | FFCP PHASE2:Hg19::chr20:4228201..4228214,+#_f312bafc6f67f49aaa35a3be9b9fcc6b | p@chr20:4228201..4228214, + |
| 7.16e-101 | FFCP PHASE1:Hg19::chr20:4228201..4228214,+#_f312bafc6f67f49aaa35a3be9b9fcc6b | p@chr20:4228201..4228214, + |
| 8.51e-101 | FFCP PHASE2:Hg19::chr9:15883095..15883109,+#_8389776b62a82dbe4201bf374cdedc10 | p@chr9:15883095..15883109, + |
| 8.51e-101 | FFCP PHASE1:Hg19::chr20:4228155..4228166,+#_8389776b62a82dbe4201bf374cdedc10 | p@chr20:4228155..4228166, + |
| 8.51e-101 | FFCP PHASE2:Hg19::chr20:4228155..4228166,+#_8389776b62a82dbe4201bf374cdedc10 | p@chr20:4228155..4228166, + |
| 8.51e-101 | FFCP PHASE1:Hg19::chr9:15883095..15883109,+#_8389776b62a82dbe4201bf374cdedc10 | p@chr9:15883095..15883109, + |
| 1.01e-100 | FFCP PHASE1:Hg19::chr9:15883050..15883085,+#_7da1c0852f16d9af9a554c4df8571801 | p@chr9:15883050..15883085, + |
| 1.01e-100 | FFCP PHASE2:Hg19::chr9:15883050..15883085,+#_7da1c0852f16d9af9a554c4df8571801 | p@chr9:15883050..15883085, + |
| 2.85e-98 | FFCP PHASE1:Hg19::chr17:31618260..31618271,+#_011e7ecb0202ce937db12a53a10e6677 | p@chr17:31618260..31618271, + |
| 2.85e-98 | FFCP PHASE1:Hg19::chr3:8407443..8407453,-#_011e7ecb0202ce937db12a53a10e6677 | p@chr3:8407443..8407453, - |
| 2.85e-98 | FFCP PHASE1:Hg19::chr2:218876066..218876078,-#_011e7ecb0202ce937db12a53a10e6677 | p@chr2:218876066..218876078, - |
| 2.85e-98 | FFCP PHASE1:Hg19::chr19:50016671..50016675,+#_011e7ecb0202ce937db12a53a10e6677 | p22@FCGRT |
| 2.85e-98 | FFCP PHASE2:Hg19::chr3:8407443..8407453,-#_011e7ecb0202ce937db12a53a10e6677 | p@chr3:8407443..8407453, - |
| 2.85e-98 | FFCP PHASE2:Hg19::chr2:218876066..218876078,-#_011e7ecb0202ce937db12a53a10e6677 | p@chr2:218876066..218876078, - |
| 2.85e-98 | FFCP PHASE2:Hg19::chr19:50016671..50016675,+#_011e7ecb0202ce937db12a53a10e6677 | p22@FCGRT |
| 2.85e-98 | FFCP PHASE2:Hg19::chr17:31618260..31618271,+#_011e7ecb0202ce937db12a53a10e6677 | p@chr17:31618260..31618271, + |
| 1.43e-88 | FFCP PHASE2:Hg19::chr8:12808701..12808712,+#_7281323f9b8d842f0254d7bfcaa16f91 | p16@KIAA1456 |
| 1.43e-88 | FFCP PHASE2:Hg19::chr1:60314016..60314043,+#_7281323f9b8d842f0254d7bfcaa16f91 | p@chr1:60314016..60314043, + |
| 1.43e-88 | FFCP PHASE1:Hg19::chr8:12808701..12808712,+#_7281323f9b8d842f0254d7bfcaa16f91 | p16@KIAA1456 |
| 1.43e-88 | FFCP PHASE1:Hg19::chr1:60314016..60314043,+#_7281323f9b8d842f0254d7bfcaa16f91 | p@chr1:60314016..60314043, + |
| 3.6e-82 | FFCP PHASE1:Hg19::chrX:19141065..19141080,-#_6fac426f4fd9c0d9ee7c27be355e22ff | p3@GPR64 |
| 3.6e-82 | FFCP PHASE2:Hg19::chrX:19141065..19141080,-#_6fac426f4fd9c0d9ee7c27be355e22ff | p3@GPR64 |
| 4.26e-82 | FFCP PHASE1:Hg19::chr8:27046735..27046767,-#_7a2747f63ac508ab3536eecd92ef724d | p@chr8:27046735..27046767, - |
| 4.26e-82 | FFCP PHASE1:Hg19::chr19:49714057..49714062,+#_7a2747f63ac508ab3536eecd92ef724d | p@chr19:49714057..49714062, + |
| 4.26e-82 | FFCP PHASE1:Hg19::chr6:123318989..123318999,+#_7a2747f63ac508ab3536eecd92ef724d | p@chr6:123318989..123318999, + |
| 4.26e-82 | FFCP PHASE2:Hg19::chr8:27046735..27046767,-#_7a2747f63ac508ab3536eecd92ef724d | p@chr8:27046735..27046767, - |
| 4.26e-82 | FFCP PHASE2:Hg19::chr19:49714057..49714062,+#_7a2747f63ac508ab3536eecd92ef724d | p@chr19:49714057..49714062, + |
| 4.26e-82 | FFCP PHASE2:Hg19::chr6:123318989..123318999,+#_7a2747f63ac508ab3536eecd92ef724d | p@chr6:123318989..123318999, + |
| 5.95e-82 | FFCP PHASE1:Hg19::chr9:15883133..15883144,+#_a7ab904fd192d8507244999c37a8c8aa | p@chr9:15883133..15883144, + |
| 5.95e-82 | FFCP PHASE2:Hg19::chr9:15883133..15883144,+#_a7ab904fd192d8507244999c37a8c8aa | p@chr9:15883133..15883144, + |
| 7.04e-82 | FFCP PHASE1:Hg19::chr4:8068231..8068247,+#_52445a04ec739dce78ebb73cdc9eb1a0 | p1@ENST00000510640 |
| 7.04e-82 | FFCP PHASE2:Hg19::chr4:8068231..8068247,+#_52445a04ec739dce78ebb73cdc9eb1a0 | p1@ENST00000510640 |
| 2.14e-80 | FFCP PHASE1:Hg19::chr8:70744711..70744752,-#_d95e53f645167d51191ed8c55706af8f | p6@SLCO5A1 |
| 2.14e-80 | FFCP PHASE2:Hg19::chr8:70744711..70744752,-#_d95e53f645167d51191ed8c55706af8f | p6@SLCO5A1 |
| 4.88e-80 | FFCP PHASE1:Hg19::chr6:123318862..123318892,+#_f661ed036d0c707c6d897c3ebffe7060 | p@chr6:123318862..123318892, + |
| 4.88e-80 | FFCP PHASE2:Hg19::chr6:123318862..123318892,+#_f661ed036d0c707c6d897c3ebffe7060 | p@chr6:123318862..123318892, + |
| 5.79e-79 | FFCP PHASE2:Hg19::chr16:8626925..8626935,+#_52d11a0f85c8f639c7154baf80094f55 | p@chr16:8626925..8626935, + |
| 5.79e-79 | FFCP PHASE2:Hg19::chr10:29717478..29717509,-#_52d11a0f85c8f639c7154baf80094f55 | p@chr10:29717478..29717509, - |
| 5.79e-79 | FFCP PHASE1:Hg19::chr10:71696103..71696151,-#_52d11a0f85c8f639c7154baf80094f55 | p@chr10:71696103..71696151, - |
| 5.79e-79 | FFCP PHASE2:Hg19::chr8:27041862..27041872,+#_52d11a0f85c8f639c7154baf80094f55 | p1@ENST00000521408 |
| 5.79e-79 | FFCP PHASE2:Hg19::chr2:228754609..228754626,+#_52d11a0f85c8f639c7154baf80094f55 | p@chr2:228754609..228754626, + |
| 5.79e-79 | FFCP PHASE2:Hg19::chr13:100951268..100951280,+#_52d11a0f85c8f639c7154baf80094f55 | p@chr13:100951268..100951280, + |
| 5.79e-79 | FFCP PHASE1:Hg19::chr16:8627066..8627076,+#_52d11a0f85c8f639c7154baf80094f55 | p@chr16:8627066..8627076, + |
| 5.79e-79 | FFCP PHASE2:Hg19::chr1:236888019..236888038,+#_52d11a0f85c8f639c7154baf80094f55 | p@chr1:236888019..236888038, + |
| 5.79e-79 | FFCP PHASE1:Hg19::chr8:27046803..27046810,-#_52d11a0f85c8f639c7154baf80094f55 | p@chr8:27046803..27046810, - |
| 5.79e-79 | FFCP PHASE2:Hg19::chr10:71696103..71696151,-#_52d11a0f85c8f639c7154baf80094f55 | p@chr10:71696103..71696151, - |
| 5.79e-79 | FFCP PHASE1:Hg19::chr16:8626925..8626935,+#_52d11a0f85c8f639c7154baf80094f55 | p@chr16:8626925..8626935, + |
| 5.79e-79 | FFCP PHASE1:Hg19::chr7:123674206..123674214,-#_52d11a0f85c8f639c7154baf80094f55 | p@chr7:123674206..123674214, - |
| 5.79e-79 | FFCP PHASE1:Hg19::chr10:71812102..71812136,+#_52d11a0f85c8f639c7154baf80094f55 | p3@H2AFY2 |
| 5.79e-79 | FFCP PHASE2:Hg19::chr8:27046803..27046810,-#_52d11a0f85c8f639c7154baf80094f55 | p@chr8:27046803..27046810, - |
| 5.79e-79 | FFCP PHASE1:Hg19::chr9:15883093..15883094,+#_52d11a0f85c8f639c7154baf80094f55 | p@chr9:15883093..15883094, + |
| 5.79e-79 | FFCP PHASE2:Hg19::chr7:123674206..123674214,-#_52d11a0f85c8f639c7154baf80094f55 | p@chr7:123674206..123674214, - |
| 5.79e-79 | FFCP PHASE2:Hg19::chr16:8627043..8627056,+#_52d11a0f85c8f639c7154baf80094f55 | p@chr16:8627043..8627056, + |
| 5.79e-79 | FFCP PHASE2:Hg19::chr10:71812102..71812136,+#_52d11a0f85c8f639c7154baf80094f55 | p3@H2AFY2 |
| 5.79e-79 | FFCP PHASE1:Hg19::chr2:228754609..228754626,+#_52d11a0f85c8f639c7154baf80094f55 | p@chr2:228754609..228754626, + |
| 5.79e-79 | FFCP PHASE1:Hg19::chr8:27041862..27041872,+#_52d11a0f85c8f639c7154baf80094f55 | p1@ENST00000521408 |
| 5.79e-79 | FFCP PHASE1:Hg19::chr10:29717478..29717509,-#_52d11a0f85c8f639c7154baf80094f55 | p@chr10:29717478..29717509, - |
| 5.79e-79 | FFCP PHASE1:Hg19::chr13:100951268..100951280,+#_52d11a0f85c8f639c7154baf80094f55 | p@chr13:100951268..100951280, + |
| 5.79e-79 | FFCP PHASE2:Hg19::chr16:8627066..8627076,+#_52d11a0f85c8f639c7154baf80094f55 | p@chr16:8627066..8627076, + |
| 5.79e-79 | FFCP PHASE1:Hg19::chr1:236888019..236888038,+#_52d11a0f85c8f639c7154baf80094f55 | p@chr1:236888019..236888038, + |
| 5.79e-79 | FFCP PHASE1:Hg19::chr16:8627043..8627056,+#_52d11a0f85c8f639c7154baf80094f55 | p@chr16:8627043..8627056, + |
| 5.79e-79 | FFCP PHASE2:Hg19::chr9:15883093..15883094,+#_52d11a0f85c8f639c7154baf80094f55 | p@chr9:15883093..15883094, + |
| 3.9e-71 | FFCP PHASE2:Hg19::chr19:49714044..49714055,+#_c9914cdb4f46faa15108d59cdbd28d86 | p@chr19:49714044..49714055, + |
| 3.9e-71 | FFCP PHASE1:Hg19::chr9:90112117..90112164,+#_c9914cdb4f46faa15108d59cdbd28d86 | p19@DAPK1 |
| 3.9e-71 | FFCP PHASE2:Hg19::chr9:90112117..90112164,+#_c9914cdb4f46faa15108d59cdbd28d86 | p19@DAPK1 |
| 3.9e-71 | FFCP PHASE1:Hg19::chr19:49714044..49714055,+#_c9914cdb4f46faa15108d59cdbd28d86 | p@chr19:49714044..49714055, + |
| 1.54e-70 | FFCP PHASE1:Hg19::chr11:16629597..16629610,-#_b62c5802c8d31b601e686ebd3fc3fac3 | p25@SOX6 |
| 1.54e-70 | FFCP PHASE1:Hg19::chr20:4228171..4228192,+#_b62c5802c8d31b601e686ebd3fc3fac3 | p@chr20:4228171..4228192, + |
| 1.54e-70 | FFCP PHASE2:Hg19::chr11:16629597..16629610,-#_b62c5802c8d31b601e686ebd3fc3fac3 | p25@SOX6 |
| 1.54e-70 | FFCP PHASE2:Hg19::chr20:4228171..4228192,+#_b62c5802c8d31b601e686ebd3fc3fac3 | p@chr20:4228171..4228192, + |
| 2.05e-70 | FFCP PHASE1:Hg19::chr20:4228567..4228605,-#_f47e810be9bfb068e4c8496f861c6e7a | p@chr20:4228567..4228605, - |
| 2.05e-70 | FFCP PHASE2:Hg19::chr20:4228567..4228605,-#_f47e810be9bfb068e4c8496f861c6e7a | p@chr20:4228567..4228605, - |
| 2.74e-70 | FFCP PHASE1:Hg19::chr19:50021351..50021354,+#_0531ce7bbad97ebf66e89924eea528ba | p@chr19:50021351..50021354, + |
| 2.74e-70 | FFCP PHASE2:Hg19::chr19:50021351..50021354,+#_0531ce7bbad97ebf66e89924eea528ba | p@chr19:50021351..50021354, + |
| 1.84e-63 | FFCP PHASE2:Hg19::chr10:71695706..71695736,-#_3877640e7b29c4f0a4293dd42765531e | p@chr10:71695706..71695736, - |
| 1.84e-63 | FFCP PHASE1:Hg19::chr19:15580961..15580969,-#_3877640e7b29c4f0a4293dd42765531e | p@chr19:15580961..15580969, - |
| 1.84e-63 | FFCP PHASE1:Hg19::chr8:27050096..27050107,+#_3877640e7b29c4f0a4293dd42765531e | p@chr8:27050096..27050107, + |
| 1.84e-63 | FFCP PHASE1:Hg19::chr6:98716530..98716546,-#_3877640e7b29c4f0a4293dd42765531e | p@chr6:98716530..98716546, - |
| 1.84e-63 | FFCP PHASE1:Hg19::chr3:197839227..197839233,+#_3877640e7b29c4f0a4293dd42765531e | p@chr3:197839227..197839233, + |
| 1.84e-63 | FFCP PHASE2:Hg19::chr8:27050096..27050107,+#_3877640e7b29c4f0a4293dd42765531e | p@chr8:27050096..27050107, + |
| 1.84e-63 | FFCP PHASE2:Hg19::chr16:8626961..8626972,+#_3877640e7b29c4f0a4293dd42765531e | p@chr16:8626961..8626972, + |
| 1.84e-63 | FFCP PHASE2:Hg19::chr11:83436107..83436115,-#_3877640e7b29c4f0a4293dd42765531e | p46@DLG2 |
| 1.84e-63 | FFCP PHASE2:Hg19::chr6:98716530..98716546,-#_3877640e7b29c4f0a4293dd42765531e | p@chr6:98716530..98716546, - |
| 1.84e-63 | FFCP PHASE2:Hg19::chr19:15580961..15580969,-#_3877640e7b29c4f0a4293dd42765531e | p@chr19:15580961..15580969, - |
| 1.84e-63 | FFCP PHASE1:Hg19::chr1:209797057..209797070,-#_3877640e7b29c4f0a4293dd42765531e | p5@MIR4260 |
| 1.84e-63 | FFCP PHASE2:Hg19::chr3:197839227..197839233,+#_3877640e7b29c4f0a4293dd42765531e | p@chr3:197839227..197839233, + |
| 1.84e-63 | FFCP PHASE1:Hg19::chr16:8626961..8626972,+#_3877640e7b29c4f0a4293dd42765531e | p@chr16:8626961..8626972, + |
| 1.84e-63 | FFCP PHASE1:Hg19::chr10:71695706..71695736,-#_3877640e7b29c4f0a4293dd42765531e | p@chr10:71695706..71695736, - |
