Personal tools

DOID:2368: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{DOID |id=DOID:2368 |name=gangliosidosis |namespace= |def= |xref= |is_a=DOID:1443;;DOID:1927 |synonym="disease, Gangliosidosis" EXACT [MTHICD9_2006:330.1];;"gangliosid...")
 
No edit summary
Line 2: Line 2:
|id=DOID:2368
|id=DOID:2368
|name=gangliosidosis
|name=gangliosidosis
|namespace=
|namespace=disease_ontology
|def=
|def=
|xref=
|xref=MSH:D005733;;SNOMEDCT_2010_1_31:50967008;;UMLS_CUI:C0017083
|is_a=DOID:1443;;DOID:1927
|is_a=DOID:1443;;DOID:1927
|synonym="disease, Gangliosidosis" EXACT [MTHICD9_2006:330.1];;"gangliosidoses" EXACT [];;"gangliosidosis" EXACT [CSP2005:1849-8576];;"Gangliosidosis (disorder)" EXACT [SNOMEDCT_2005_07_31:50967008]
|synonym="disease, Gangliosidosis" EXACT [MTHICD9_2006:330.1];;"gangliosidoses" EXACT [];;"gangliosidosis" EXACT [CSP2005:1849-8576];;"Gangliosidosis (disorder)" EXACT [SNOMEDCT_2005_07_31:50967008]
Line 20: Line 20:
|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 13:59, 11 June 2012

Name:gangliosidosis
Namespace:disease_ontology
Xrefs:
links:

MSH:D005733
SNOMEDCT_2010_1_31:50967008

UMLS_CUI:C0017083
Synonyms: "disease, Gangliosidosis" EXACT [MTHICD9_2006:330.1]
"gangliosidoses" EXACT []
"gangliosidosis" EXACT [CSP2005:1849-8576]
"Gangliosidosis (disorder)" EXACT [SNOMEDCT_2005_07_31:50967008]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:1443(cerebral degeneration),DOID:1927(sphingolipidosis)



Children


is a:DOID:3321 (gangliosidosis GM2)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:2368 (gangliosidosis), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results