CL:0000137: Difference between revisions
From FANTOM5_SSTAR
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|id=CL:0000137
|name=osteocyte
|namespace=cell
|def="A mature osteoblast that has become embedded in the bone matrix. They occupy a small cavity, called lacuna, in th...") |
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Revision as of 17:36, 15 June 2012
| Name: | osteocyte | ||
|---|---|---|---|
| Namespace: | cell | ||
| Definition: | "A mature osteoblast that has become embedded in the bone matrix. They occupy a small cavity, called lacuna, in the matrix and are connected to adjacent osteocytes via protoplasmic projections called canaliculi." [GOC:tfm, MESH:A.11.329.629.500] | ||
| Xrefs: |
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| Synonyms: | "bone cell" BROAD [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000054(bone matrix secreting cell),CL:0002320(connective tissue cell) |
|---|---|
| develops_from: | CL:0000062(osteoblast) |
Children
| is a: | FF:0100372 (bone cancer cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10704-109H2 (osteoclastoma cell line:Hs 706.T)
- 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)
- 10731-110B2
Mouse (Mus musculus)
- 10704-109H2 (osteoclastoma cell line:Hs 706.T)
- 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)
- 10731-110B2
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000137 (osteocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE2:Hg19::chr16:77317713..77317723,+#_0ed660732a846b4b3ab782edc2a82fb7 | p1@CU687665 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr16:77317713..77317723,+#_0ed660732a846b4b3ab782edc2a82fb7 | p1@CU687665 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:101742272..101742276,-#_0ed660732a846b4b3ab782edc2a82fb7 | p@chr11:101742272..101742276, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:101742272..101742276,-#_0ed660732a846b4b3ab782edc2a82fb7 | p@chr11:101742272..101742276, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr16:51670868..51670880,-#_736baf4df13d3a10d5739d5c90a3f042 | p@chr16:51670868..51670880, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr11:81551043..81551054,-#_736baf4df13d3a10d5739d5c90a3f042 | p@chr11:81551043..81551054, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr5:14034644..14034647,-#_736baf4df13d3a10d5739d5c90a3f042 | p@chr5:14034644..14034647, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr5:14034644..14034647,-#_736baf4df13d3a10d5739d5c90a3f042 | p@chr5:14034644..14034647, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr18:71197490..71197495,-#_736baf4df13d3a10d5739d5c90a3f042 | p@chr18:71197490..71197495, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr18:71197490..71197495,-#_736baf4df13d3a10d5739d5c90a3f042 | p@chr18:71197490..71197495, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr16:51670868..51670880,-#_736baf4df13d3a10d5739d5c90a3f042 | p@chr16:51670868..51670880, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr11:81551043..81551054,-#_736baf4df13d3a10d5739d5c90a3f042 | p@chr11:81551043..81551054, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr3:45174403..45174415,+#_2d6e243a84e838a280017bbb02a76ddc | p@chr3:45174403..45174415, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr3:45174403..45174415,+#_2d6e243a84e838a280017bbb02a76ddc | p@chr3:45174403..45174415, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr5:23952305..23952310,+#_2d6e243a84e838a280017bbb02a76ddc | p@chr5:23952305..23952310, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr5:23952305..23952310,+#_2d6e243a84e838a280017bbb02a76ddc | p@chr5:23952305..23952310, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr4:34480309..34480321,-#_2d6e243a84e838a280017bbb02a76ddc | p@chr4:34480309..34480321, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr4:34480309..34480321,-#_2d6e243a84e838a280017bbb02a76ddc | p@chr4:34480309..34480321, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr3:106393655..106393659,+#_2d6e243a84e838a280017bbb02a76ddc | p@chr3:106393655..106393659, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr3:106393655..106393659,+#_2d6e243a84e838a280017bbb02a76ddc | p@chr3:106393655..106393659, + |
| 3.61e-34 | FFCP PHASE1:Hg19::chr7:119353807..119353812,-#_9e332946fce6e9f2459ae6478946d97b | p@chr7:119353807..119353812, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr7:119353807..119353812,-#_9e332946fce6e9f2459ae6478946d97b | p@chr7:119353807..119353812, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr4:177796841..177796851,+#_9e332946fce6e9f2459ae6478946d97b | p1@ENST00000508790 |
| 3.61e-34 | FFCP PHASE1:Hg19::chr4:177796841..177796851,+#_9e332946fce6e9f2459ae6478946d97b | p1@ENST00000508790 |
| 5.04e-34 | FFCP PHASE2:Hg19::chrX:132231123..132231140,-#_f1de44897cde57317f4f7d930dba8eb3 | p1@USP26 |
| 5.04e-34 | FFCP PHASE1:Hg19::chrX:132231123..132231140,-#_f1de44897cde57317f4f7d930dba8eb3 | p1@USP26 |
| 5.04e-34 | FFCP PHASE2:Hg19::chr4:46093758..46093781,-#_f1de44897cde57317f4f7d930dba8eb3 | p@chr4:46093758..46093781, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr4:46093758..46093781,-#_f1de44897cde57317f4f7d930dba8eb3 | p@chr4:46093758..46093781, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr10:37004821..37004852,-#_f1de44897cde57317f4f7d930dba8eb3 | p@chr10:37004821..37004852, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr8:15939682..15939688,+#_f1de44897cde57317f4f7d930dba8eb3 | p@chr8:15939682..15939688, + |
| 5.04e-34 | FFCP PHASE2:Hg19::chr8:15939682..15939688,+#_f1de44897cde57317f4f7d930dba8eb3 | p@chr8:15939682..15939688, + |
| 5.04e-34 | FFCP PHASE1:Hg19::chr10:37004821..37004852,-#_f1de44897cde57317f4f7d930dba8eb3 | p@chr10:37004821..37004852, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chrX:89462083..89462089,+#_e54bd26e04e86a3707b09c67f84a8313 | p@chrX:89462083..89462089, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chrX:89462083..89462089,+#_e54bd26e04e86a3707b09c67f84a8313 | p@chrX:89462083..89462089, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr11:84019133..84019135,-#_e54bd26e04e86a3707b09c67f84a8313 | p@chr11:84019133..84019135, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr6:155427848..155427862,+#_e54bd26e04e86a3707b09c67f84a8313 | p@chr6:155427848..155427862, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr6:155427848..155427862,+#_e54bd26e04e86a3707b09c67f84a8313 | p@chr6:155427848..155427862, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr11:84019133..84019135,-#_e54bd26e04e86a3707b09c67f84a8313 | p@chr11:84019133..84019135, - |
| 5.5e-31 | FFCP PHASE2:Hg19::chr3:106556598..106556609,-#_be09b49bb730dc66a596e1a0bd3df1a3 | p@chr3:106556598..106556609, - |
| 5.5e-31 | FFCP PHASE1:Hg19::chr3:106556598..106556609,-#_be09b49bb730dc66a596e1a0bd3df1a3 | p@chr3:106556598..106556609, - |
| 7.1e-28 | FFCP PHASE1:Hg19::chr6:68597008..68597030,-#_126b58f83f10db030b60aa72fc9864f6 | p@chr6:68597008..68597030, - |
| 7.1e-28 | FFCP PHASE2:Hg19::chr6:68597008..68597030,-#_126b58f83f10db030b60aa72fc9864f6 | p@chr6:68597008..68597030, - |
| 4.32e-26 | FFCP PHASE2:Hg19::chr5:27723923..27723927,-#_9042dc72f57b6fc04bca35e043c0af2b | p@chr5:27723923..27723927, - |
| 4.32e-26 | FFCP PHASE1:Hg19::chr5:27723923..27723927,-#_9042dc72f57b6fc04bca35e043c0af2b | p@chr5:27723923..27723927, - |
| 4.32e-26 | FFCP PHASE2:Hg19::chr11:81549961..81549965,-#_9042dc72f57b6fc04bca35e043c0af2b | p@chr11:81549961..81549965, - |
| 4.32e-26 | FFCP PHASE1:Hg19::chr11:81549961..81549965,-#_9042dc72f57b6fc04bca35e043c0af2b | p@chr11:81549961..81549965, - |
| 5.56e-26 | FFCP PHASE2:Hg19::chrX:124347061..124347063,-#_d7b62e3695120cb9edc9a17ce28a3535 | p@chrX:124347061..124347063, - |
| 5.56e-26 | FFCP PHASE1:Hg19::chrX:124347061..124347063,-#_d7b62e3695120cb9edc9a17ce28a3535 | p@chrX:124347061..124347063, - |
| 5.56e-26 | FFCP PHASE2:Hg19::chrX:132352373..132352384,-#_d7b62e3695120cb9edc9a17ce28a3535 | p1@TFDP3 |
| 5.56e-26 | FFCP PHASE1:Hg19::chrX:132352373..132352384,-#_d7b62e3695120cb9edc9a17ce28a3535 | p1@TFDP3 |
| 5.56e-26 | FFCP PHASE2:Hg19::chr5:153673183..153673186,+#_d7b62e3695120cb9edc9a17ce28a3535 | p@chr5:153673183..153673186, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr5:153673183..153673186,+#_d7b62e3695120cb9edc9a17ce28a3535 | p@chr5:153673183..153673186, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr4:189864018..189864037,+#_d7b62e3695120cb9edc9a17ce28a3535 | p@chr4:189864018..189864037, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr4:189864018..189864037,+#_d7b62e3695120cb9edc9a17ce28a3535 | p@chr4:189864018..189864037, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr5:167315847..167315852,+#_d7b62e3695120cb9edc9a17ce28a3535 | p@chr5:167315847..167315852, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr5:167315847..167315852,+#_d7b62e3695120cb9edc9a17ce28a3535 | p@chr5:167315847..167315852, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chrX:89176902..89176913,+#_d7b62e3695120cb9edc9a17ce28a3535 | p1@TGIF2LX |
| 5.56e-26 | FFCP PHASE1:Hg19::chrX:89176902..89176913,+#_d7b62e3695120cb9edc9a17ce28a3535 | p1@TGIF2LX |
| 9.18e-26 | FFCP PHASE2:Hg19::chr7:12997533..12997536,+#_f1dbe81279fda7c7b7ce0c6efad3d9c5 | p@chr7:12997533..12997536, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr18:14946224..14946236,+#_f1dbe81279fda7c7b7ce0c6efad3d9c5 | p1@FLJ44255 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr18:14946224..14946236,+#_f1dbe81279fda7c7b7ce0c6efad3d9c5 | p1@FLJ44255 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr7:12997533..12997536,+#_f1dbe81279fda7c7b7ce0c6efad3d9c5 | p@chr7:12997533..12997536, + |
| 1.12e-25 | FFCP PHASE2:Hg19::chrX:55246809..55246816,+#_2a736f20e1c7079389b9ac301272c573 | p3@PAGE5 |
| 1.12e-25 | FFCP PHASE1:Hg19::chrX:55246809..55246816,+#_2a736f20e1c7079389b9ac301272c573 | p3@PAGE5 |
| 4.89e-23 | FFCP PHASE2:Hg19::chrX:55246818..55246829,+#_28e59faa65df0297ad70d16bc2b79402 | p2@PAGE5 |
| 4.89e-23 | FFCP PHASE1:Hg19::chrX:55246818..55246829,+#_28e59faa65df0297ad70d16bc2b79402 | p2@PAGE5 |
| 3.11e-21 | FFCP PHASE1:Hg19::chr12:127737083..127737103,-#_fe3d03d928a2f19fad1466128659d853 | p@chr12:127737083..127737103, - |
| 3.11e-21 | FFCP PHASE1:Hg19::chr8:119905427..119905438,-#_fe3d03d928a2f19fad1466128659d853 | p@chr8:119905427..119905438, - |
| 3.11e-21 | FFCP PHASE2:Hg19::chr8:119905427..119905438,-#_fe3d03d928a2f19fad1466128659d853 | p@chr8:119905427..119905438, - |
| 3.11e-21 | FFCP PHASE2:Hg19::chr5:27742047..27742052,-#_fe3d03d928a2f19fad1466128659d853 | p@chr5:27742047..27742052, - |
| 3.11e-21 | FFCP PHASE1:Hg19::chr5:27742047..27742052,-#_fe3d03d928a2f19fad1466128659d853 | p@chr5:27742047..27742052, - |
| 3.11e-21 | FFCP PHASE2:Hg19::chr12:127737083..127737103,-#_fe3d03d928a2f19fad1466128659d853 | p@chr12:127737083..127737103, - |
| 3.81e-21 | FFCP PHASE2:Hg19::chr5:135378750..135378757,+#_63f4bdca9f228776cf667a487aab343e | p@chr5:135378750..135378757, + |
| 3.81e-21 | FFCP PHASE1:Hg19::chr5:135378750..135378757,+#_63f4bdca9f228776cf667a487aab343e | p@chr5:135378750..135378757, + |
| 3.81e-21 | FFCP PHASE2:Hg19::chr2:145815206..145815208,+#_63f4bdca9f228776cf667a487aab343e | p@chr2:145815206..145815208, + |
| 3.81e-21 | FFCP PHASE1:Hg19::chr2:145815206..145815208,+#_63f4bdca9f228776cf667a487aab343e | p@chr2:145815206..145815208, + |
| 3.81e-21 | FFCP PHASE2:Hg19::chr13:87732242..87732246,-#_63f4bdca9f228776cf667a487aab343e | p@chr13:87732242..87732246, - |
| 3.81e-21 | FFCP PHASE2:Hg19::chr19:9811101..9811112,-#_63f4bdca9f228776cf667a487aab343e | p3@ZNF812 |
| 3.81e-21 | FFCP PHASE1:Hg19::chr13:87732242..87732246,-#_63f4bdca9f228776cf667a487aab343e | p@chr13:87732242..87732246, - |
| 3.81e-21 | FFCP PHASE1:Hg19::chr19:9811101..9811112,-#_63f4bdca9f228776cf667a487aab343e | p3@ZNF812 |
| 3.81e-21 | FFCP PHASE2:Hg19::chr9:118595109..118595124,+#_63f4bdca9f228776cf667a487aab343e | p@chr9:118595109..118595124, + |
| 3.81e-21 | FFCP PHASE1:Hg19::chr9:118595109..118595124,+#_63f4bdca9f228776cf667a487aab343e | p@chr9:118595109..118595124, + |
| 4.66e-21 | FFCP PHASE2:Hg19::chrX:140336680..140336697,-#_1b966c48d4dcfcf9ef3e20b42fff4420 | p2@SPANXC |
| 4.66e-21 | FFCP PHASE1:Hg19::chrX:140336680..140336697,-#_1b966c48d4dcfcf9ef3e20b42fff4420 | p2@SPANXC |
| 5.7e-21 | FFCP PHASE2:Hg19::chr2:33171944..33171945,+#_b86acf293063d27ed30218dbd06a0c61 | p15@LTBP1 |
| 5.7e-21 | FFCP PHASE1:Hg19::chr2:33171944..33171945,+#_b86acf293063d27ed30218dbd06a0c61 | p15@LTBP1 |
| 5.7e-21 | FFCP PHASE2:Hg19::chr5:142000787..142000807,-#_b86acf293063d27ed30218dbd06a0c61 | p@chr5:142000787..142000807, - |
| 5.7e-21 | FFCP PHASE1:Hg19::chr5:142000787..142000807,-#_b86acf293063d27ed30218dbd06a0c61 | p@chr5:142000787..142000807, - |
| 6.96e-21 | FFCP PHASE2:Hg19::chr3:60761167..60761179,+#_494e498f702dc65e3fad74fb40c6a34b | p@chr3:60761167..60761179, + |
| 6.96e-21 | FFCP PHASE1:Hg19::chr3:60761167..60761179,+#_494e498f702dc65e3fad74fb40c6a34b | p@chr3:60761167..60761179, + |
| 6.96e-21 | FFCP PHASE1:Hg19::chr8:76774227..76774234,+#_494e498f702dc65e3fad74fb40c6a34b | p@chr8:76774227..76774234, + |
| 6.96e-21 | FFCP PHASE2:Hg19::chr8:76774227..76774234,+#_494e498f702dc65e3fad74fb40c6a34b | p@chr8:76774227..76774234, + |
| 6.96e-21 | FFCP PHASE2:Hg19::chr11:12061317..12061323,-#_494e498f702dc65e3fad74fb40c6a34b | p@chr11:12061317..12061323, - |
| 6.96e-21 | FFCP PHASE2:Hg19::chr5:81611412..81611423,+#_494e498f702dc65e3fad74fb40c6a34b | p@chr5:81611412..81611423, + |
| 6.96e-21 | FFCP PHASE2:Hg19::chr18:63273310..63273317,+#_494e498f702dc65e3fad74fb40c6a34b | p@chr18:63273310..63273317, + |
| 6.96e-21 | FFCP PHASE1:Hg19::chr5:81611412..81611423,+#_494e498f702dc65e3fad74fb40c6a34b | p@chr5:81611412..81611423, + |
| 6.96e-21 | FFCP PHASE1:Hg19::chr18:63273310..63273317,+#_494e498f702dc65e3fad74fb40c6a34b | p@chr18:63273310..63273317, + |
| 6.96e-21 | FFCP PHASE2:Hg19::chr11:28792916..28792929,+#_494e498f702dc65e3fad74fb40c6a34b | p@chr11:28792916..28792929, + |
| 6.96e-21 | FFCP PHASE1:Hg19::chr11:12061317..12061323,-#_494e498f702dc65e3fad74fb40c6a34b | p@chr11:12061317..12061323, - |
| 6.96e-21 | FFCP PHASE1:Hg19::chr11:28792916..28792929,+#_494e498f702dc65e3fad74fb40c6a34b | p@chr11:28792916..28792929, + |
