Personal tools

FFCP PHASE1:Mm9::chr3:58329639..58329650,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0005409!5.37e-14!59;UBERON:0000160!1.25e-13!43;UBERON:0004119!1.45e-11!130;UBERON:0000925!1.45e-11!130;UBERON:0006595!1.45e-11!130;UBERON:0001007!3.24e-11!128;UBERON:0001555!3.24e-11!128;UBERON:0007026!3.24e-11!128;UBERON:0002100!4.16e-11!98;UBERON:0004921!1.29e-10!126;UBERON:0004185!1.29e-10!126;UBERON:0005256!7.39e-10!47;UBERON:0005177!2.26e-09!85;UBERON:0002108!2.59e-09!16;UBERON:0002365!3.89e-09!25;UBERON:0002330!3.89e-09!25;UBERON:0000466!6.18e-09!79;UBERON:0005172!2.12e-08!49;UBERON:0005173!2.12e-08!49;UBERON:0002417!2.12e-08!49;UBERON:0000916!2.12e-08!49;UBERON:0001264!3.80e-08!12;UBERON:0003922!3.80e-08!12;UBERON:0002114!3.80e-08!12;UBERON:0003923!3.80e-08!12;UBERON:0003924!3.80e-08!12;UBERON:0003921!3.80e-08!12;UBERON:0001045!5.48e-08!13;UBERON:0003104!1.45e-07!131;UBERON:0009142!1.45e-07!131;UBERON:0009854!1.92e-07!23;UBERON:0009856!1.92e-07!23;UBERON:0002107!1.92e-07!22;UBERON:0007499!1.92e-07!22;UBERON:0006925!1.92e-07!22;UBERON:0009497!1.92e-07!22;UBERON:0000015!1.92e-07!22;UBERON:0002423!1.92e-07!22;UBERON:0006235!1.92e-07!22;UBERON:0008835!1.92e-07!22;UBERON:0003894!1.92e-07!22;UBERON:0004161!1.92e-07!22;UBERON:0008836!1.92e-07!22;UBERON:0009569!5.29e-07!66
|phase1_expression=5.2849119544582,53.3932373688222,55.9649064449129,39.3203474698879,47.585094344903,24.5103736991359,23.8284893407436,2.32421982194837,8.024957162645,7.2560003159818,1.88339765048055,1.19658238493005,2.05440875917447,0.874204024189974,8.32774404539157,7.28910962603373,2.79824751251259,26.0256286420546,33.8672651006175,28.434106670468,24.0672511127527,8.04256704727171,12.27639008953,17.2791816616879,19.0409703285751,41.3447014162815,26.7072437618626,28.6576739472232,18.0522248483555,17.6421090831952,25.49900872536,1.90509202037889,1.84519436275371,0,8.66554859253824,7.14808975041517,6.32925004413344,21.7636447983192,29.6907430919044,21.9879972468995,45.8820560664191,44.397956522299,40.7828696546169,9.81995180209503,8.41428529121971,8.07605709511399,6.25913075478431,6.97680500417429,6.37089929929968,8.1660557611199,9.09911740564856,7.18762821824858,54.697129574822,3.62681071005672,5.37750078627942,12.0911934936895,6.01720223871389,10.8291139378263,0.606949382578793,1.05798195854407,0.633831403506179,10.165335962074,11.5608323494448,22.9474427906757,16.8107281636386,16.3410426437603,6.2916023208865,8.06858441175265,1.65903379693564,1.62007125998029,0.841299845405528,2.57085885963423,2.65042249141936,0.857435594504678,1.34183659425531,0,0,1.65993539510744,0.768032666281217,0.923204014111357,0.457438218012048,2.08365348222704,0.837548997004143,1.68828783009504,1.83357897332172,1.76777151284201,1.99320353118744,2.23679334990361,8.32988126665025,3.55186332501892,4.34796733052517,46.4628893569949,85.6763880471766,57.2085383136086,69.5260766669006,53.7632264516803,33.4257719913569,2.89731548382698,3.11743205523443,2.47337702157238,7.04217098883402,0,10.1922095882658,14.2213340630666,11.0410430915719,10.6411143499541,13.1436355703844,41.7912999771759,31.8493596886021,18.2583831049734,9.02123699183906,10.3518262626128,16.8349312996923,15.8258772580254,9.40709657085639,14.8286577769017,7.16865406429684,11.8571472674328,4.42305275974937,5.98537344805414,7.50861162765338,11.1521308221101,9.31958806090611,1.46390398505774,1.8850203613211,27.8448190177365,6.35020159881377,11.9980546198682,8.51370521389534,0.898743836428936,0.457500602818626,1.13088916901578,1.91206752211504,2.55715457330331,2.0778804455956,1.46017136760982,5.39748628406676,10.8234064430781,11.625246887949,6.73413938836717,4.29397461776922,5.51765050640335,2.52086981727489,4.9732589885786,2.85753296435577,3.45907044769094,2.52994656311268,6.46758426847539,4.95806383745537,2.83659120251729,4.22282697993477,5.47989331068937,3.61461423993277,4.87553033131033,4.52720700097476,1.19420560091096,8.42655824775882,11.5806558201622,15.9131559661532,4.55676699578104,3.04883877975425,3.24111710629827,3.55117103377815,4.13204886669548,2.77680803197281,3.25547522650571,3.21928081679543,2.6856028744449,2.63295759861569,2.13417703302824,2.67527071501324,2.04679982395465,3.73235195994786,3.22095405024892,2.10289948564127,2.88132914661996,33.0418782983798,32.5274196996159,2.55945900642281,4.18026009348789,7.08771037271513,10.6892268050372,12.8979265430025,17.690983228468,27.5226855695817,18.4462829290892,12.8180956488137,12.7332142106337,15.5971269695296,15.2799299471218,15.7780776408527,21.5072575114717,8.34538764193559,6.51216521875454,6.76246414038483,5.09128319613286,4.65485969202302,6.73303870947058,7.14572869504107,10.4803205065518,18.5258498852822,16.1650284737559,61.9585990612141,6.67380422864376,6.6830058338489,6.74586337154561,11.5630269191447,10.8529721888588,17.0599320693551,30.4957905697859,19.2940919862292,37.8894750199552,24.4405951096503,22.3284568601102,27.1472775609668,41.1703571053792,58.1247619810995,45.3496910081565,12.1937105509959,5.87423376488503,3.09633455239849,4.58311731593008,3.28566347603903,5.19269398069629,5.47500374037832,8.97614780145875,4.57141917907954,4.4292937929755,5.74037167166954,8.02930242107116,8.28887912956299,8.53429445630918,9.04747703635634,60.3735309038768,114.089311340416,51.600171558985,1.9266070798535,2.34423373184406,10.1639666133539,2.7771801992481,3.47059041357882,4.29482618726302,2.15423397732799,2.62865677747807,1.78238939265915,1.69845918473299,1.61924280669958,3.50707029493574,1.97643888973262,1.92792789853084,11.2132667314532,2.67098405500883,5.04949573996086,13.0326397148303,286.72949881432,8.49732226542435,27.5114436837923,128.062849154255,150.308663476313,144.494519533646,64.8655015852235,64.709003846996,73.0819625688679,203.21163535273,297.280476181497,312.500696042006,7.48967132658334,3.42116078659489,4.39819524861365,3.85806663056866,3.90148514013002,3.74574516964348,3.9491764944509,7.30715877875038,12.2029288193129,9.53244318887191,58.4400254845649,6.76033637060068,3.39075296061402,3.73940134554566,3.34242563208782,4.59594519286172,19.8206968908299,3.8939313422207,15.7201210334024,12.3832120777933,9.07453184111587,4.52084296811258,6.69801715833023,9.15112692826091,3.22959016988325,4.05859211738608,5.8043988997858,18.1387417422872,4.27053591334533,6.30290348093231,8.4244165841005,8.15444354456428,14.4119292072477,13.0818415993276,12.8939390931524,17.53764811293,8.94343315713371,103.763665285517,124.012446510522,3.28936401296753,3.97100377097034,3.30567020184881,3.22899558694328,5.06868376472335,1.64300134104056,3.6457227756306,3.46035836604846,26.5742532908607,54.1496411764787,2.21207784439725,5.6763060281246,4.41657115808757,3.63778304337826,1.9692936523423,2.18549490259391,1.9231271923195,2.06765338044408,1.11063094942962,1.21930890648,1.71404514732629,1.26695244961678,1.53938946624527,1.5193997283604,10.4295976462997,1.55390167361845,1.88399098879899,2.01461539636894,4.44336066274038,24.2110393332025,11.9048555773722,9.86094543763703,66.7090898367033,3.3885110557024,1.38097570952153,1.71868654031819,2.06223818812425,0,1.5107877947794,1.35004500046361,1.35096360967266,0.453142408984205,0.51776031175182,6.95375228813984,1.59609949360412,3.75613932659095,7.29320151204882,10.8998844566551,15.4428547098012,7.55638874525492,9.88968274746692,7.06022261101994,7.32821914115013,7.60437899670719,6.79054828989874,8.89594320963883,9.21962194630118,9.47685237767619,11.4310485907938,9.38663040153329,9.64546102318525,5.76920261124629,7.80154276712306,6.17164654293748,9.05126611412621,8.10683045820891,7.99405291477807,8.75217237862575,9.30760686808441,8.23175877927476,6.57674278594607,10.3211126522855,7.85599180320834,10.202611558679,10.145961684683,4.09231043169689,10.2258315182738,8.48789088317022,4.49659040288303,8.4215379040347,6.23126056740065,4.01705497344571,8.82365676478062,7.18790290423307
|phase1_expression=5.2849119544582,53.3932373688222,55.9649064449129,39.3203474698879,47.585094344903,24.5103736991359,23.8284893407436,2.32421982194837,8.024957162645,7.2560003159818,1.88339765048055,1.19658238493005,2.05440875917447,0.874204024189974,8.32774404539157,7.28910962603373,2.79824751251259,26.0256286420546,33.8672651006175,28.434106670468,24.0672511127527,8.04256704727171,12.27639008953,17.2791816616879,19.0409703285751,41.3447014162815,26.7072437618626,28.6576739472232,18.0522248483555,17.6421090831952,25.49900872536,1.90509202037889,1.84519436275371,0,8.66554859253824,7.14808975041517,6.32925004413344,21.7636447983192,29.6907430919044,21.9879972468995,45.8820560664191,44.397956522299,40.7828696546169,9.81995180209503,8.41428529121971,8.07605709511399,6.25913075478431,6.97680500417429,6.37089929929968,8.1660557611199,9.09911740564856,7.18762821824858,54.697129574822,3.62681071005672,5.37750078627942,12.0911934936895,6.01720223871389,10.8291139378263,0.606949382578793,1.05798195854407,0.633831403506179,10.165335962074,11.5608323494448,22.9474427906757,16.8107281636386,16.3410426437603,6.2916023208865,8.06858441175265,1.65903379693564,1.62007125998029,0.841299845405528,2.57085885963423,2.65042249141936,0.857435594504678,1.34183659425531,0,0,1.65993539510744,0.768032666281217,0.923204014111357,0.457438218012048,2.08365348222704,0.837548997004143,1.68828783009504,1.83357897332172,1.76777151284201,1.99320353118744,2.23679334990361,8.32988126665025,3.55186332501892,4.34796733052517,46.4628893569949,85.6763880471766,57.2085383136086,69.5260766669006,53.7632264516803,33.4257719913569,2.89731548382698,3.11743205523443,2.47337702157238,7.04217098883402,0,10.1922095882658,14.2213340630666,11.0410430915719,10.6411143499541,13.1436355703844,41.7912999771759,31.8493596886021,18.2583831049734,9.02123699183906,10.3518262626128,16.8349312996923,15.8258772580254,9.40709657085639,14.8286577769017,7.16865406429684,11.8571472674328,4.42305275974937,5.98537344805414,7.50861162765338,11.1521308221101,9.31958806090611,1.46390398505774,1.8850203613211,27.8448190177365,6.35020159881377,11.9980546198682,8.51370521389534,0.898743836428936,0.457500602818626,1.13088916901578,1.91206752211504,2.55715457330331,2.0778804455956,1.46017136760982,5.39748628406676,10.8234064430781,11.625246887949,6.73413938836717,4.29397461776922,5.51765050640335,2.52086981727489,4.9732589885786,2.85753296435577,3.45907044769094,2.52994656311268,6.46758426847539,4.95806383745537,2.83659120251729,4.22282697993477,5.47989331068937,3.61461423993277,4.87553033131033,4.52720700097476,1.19420560091096,8.42655824775882,11.5806558201622,15.9131559661532,4.55676699578104,3.04883877975425,3.24111710629827,3.55117103377815,4.13204886669548,2.77680803197281,3.25547522650571,3.21928081679543,2.6856028744449,2.63295759861569,2.13417703302824,2.67527071501324,2.04679982395465,3.73235195994786,3.22095405024892,2.10289948564127,2.88132914661996,33.0418782983798,32.5274196996159,2.55945900642281,4.18026009348789,7.08771037271513,10.6892268050372,12.8979265430025,17.690983228468,27.5226855695817,18.4462829290892,12.8180956488137,12.7332142106337,15.5971269695296,15.2799299471218,15.7780776408527,21.5072575114717,8.34538764193559,6.51216521875454,6.76246414038483,5.09128319613286,4.65485969202302,6.73303870947058,7.14572869504107,10.4803205065518,18.5258498852822,16.1650284737559,61.9585990612141,6.67380422864376,6.6830058338489,6.74586337154561,11.5630269191447,10.8529721888588,17.0599320693551,30.4957905697859,19.2940919862292,37.8894750199552,24.4405951096503,22.3284568601102,27.1472775609668,41.1703571053792,58.1247619810995,45.3496910081565,12.1937105509959,5.87423376488503,3.09633455239849,4.58311731593008,3.28566347603903,5.19269398069629,5.47500374037832,8.97614780145875,4.57141917907954,4.4292937929755,5.74037167166954,8.02930242107116,8.28887912956299,8.53429445630918,9.04747703635634,60.3735309038768,114.089311340416,51.600171558985,1.9266070798535,2.34423373184406,10.1639666133539,2.7771801992481,3.47059041357882,4.29482618726302,2.15423397732799,2.62865677747807,1.78238939265915,1.69845918473299,1.61924280669958,3.50707029493574,1.97643888973262,1.92792789853084,11.2132667314532,2.67098405500883,5.04949573996086,13.0326397148303,286.72949881432,8.49732226542435,27.5114436837923,128.062849154255,150.308663476313,144.494519533646,64.8655015852235,64.709003846996,73.0819625688679,203.21163535273,297.280476181497,312.500696042006,7.48967132658334,3.42116078659489,4.39819524861365,3.85806663056866,3.90148514013002,3.74574516964348,3.9491764944509,7.30715877875038,12.2029288193129,9.53244318887191,58.4400254845649,6.76033637060068,3.39075296061402,3.73940134554566,3.34242563208782,4.59594519286172,19.8206968908299,3.8939313422207,15.7201210334024,12.3832120777933,9.07453184111587,4.52084296811258,6.69801715833023,9.15112692826091,3.22959016988325,4.05859211738608,5.8043988997858,18.1387417422872,4.27053591334533,6.30290348093231,8.4244165841005,8.15444354456428,14.4119292072477,13.0818415993276,12.8939390931524,17.53764811293,8.94343315713371,103.763665285517,124.012446510522,3.28936401296753,3.97100377097034,3.30567020184881,3.22899558694328,5.06868376472335,1.64300134104056,3.6457227756306,3.46035836604846,26.5742532908607,54.1496411764787,2.21207784439725,5.6763060281246,4.41657115808757,3.63778304337826,1.9692936523423,2.18549490259391,1.9231271923195,2.06765338044408,1.11063094942962,1.21930890648,1.71404514732629,1.26695244961678,1.53938946624527,1.5193997283604,10.4295976462997,1.55390167361845,1.88399098879899,2.01461539636894,4.44336066274038,24.2110393332025,11.9048555773722,9.86094543763703,66.7090898367033,3.3885110557024,1.38097570952153,1.71868654031819,2.06223818812425,0,1.5107877947794,1.35004500046361,1.35096360967266,0.453142408984205,0.51776031175182,6.95375228813984,1.59609949360412,3.75613932659095,7.29320151204882,10.8998844566551,15.4428547098012,7.55638874525492,9.88968274746692,7.06022261101994,7.32821914115013,7.60437899670719,6.79054828989874,8.89594320963883,9.21962194630118,9.47685237767619,11.4310485907938,9.38663040153329,9.64546102318525,5.76920261124629,7.80154276712306,6.17164654293748,9.05126611412621,8.10683045820891,7.99405291477807,8.75217237862575,9.30760686808441,8.23175877927476,6.57674278594607,10.3211126522855,7.85599180320834,10.202611558679,10.145961684683,4.09231043169689,10.2258315182738,8.48789088317022,4.49659040288303,8.4215379040347,6.23126056740065,4.01705497344571,8.82365676478062,7.18790290423307
|short_description=p3@Serp1
|short_description=p3@Serp1
}}
}}

Revision as of 11:25, 19 April 2012

Short description:p3@Serp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Serp1_5end
Coexpression cluster:NA
Association with transcript: 144bp_to_ENSMUST00000029385_5end
EntrezGene:Serp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Serp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I553.39
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I655.96
CD326+ enterocyte, pool1.CNhs13542.11848-124I339.32
CD326+ enterocyte, pool2.CNhs13197.11849-124I447.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I823.83
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.02
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.26
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.29
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A226.03
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A433.87
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A324.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.28
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D117.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.04
GP2+ M cell, pool1.CNhs13228.11845-124H941.34
GP2+ M cell, pool2.CNhs13231.11846-124I126.71
GP2+ M cell, pool3.CNhs13240.11847-124I228.66
Ileum epithelium, pool1.CNhs13199.10252-104B918.05
Ileum epithelium, pool2.CNhs13232.10253-104C117.64
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C825.50
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.67
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G821.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H129.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H321.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G945.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H244.40
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H440.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.82
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.08
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.98
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.37
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A254.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.38
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.83
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.17
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C722.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E716.81
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D216.34
Mouse Microglia, donor1.CNhs12629.11718-123C86.29
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D98.33
Mouse Schwann, donor2.CNhs12573.11746-123F93.55
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F746.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C485.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C857.21
Mouse hepatocyte, donor6.CNhs13090.11822-124F469.53
Mouse hepatocyte, donor8.CNhs13091.11824-124F653.76
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A733.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.04
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G111.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.64
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.14
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B641.79
accessory axillary lymph node, adult.CNhs10475.1063-29H931.85
adrenal gland, adult.CNhs10508.49-24D718.26
adrenal gland, embryo E14.CNhs11038.406-44C59.02
adrenal gland, embryo E16.CNhs11004.1254-43D610.35
adrenal gland, embryo E17.CNhs11043.1263-45I116.83
adrenal gland, embryo E18.CNhs11026.1262-18F515.83
adrenal gland, neonate N00.CNhs11191.1311-23C19.41
adrenal gland, neonate N25.CNhs11223.1377-27I314.83
amnion, adult pregnant day17.5.CNhs10488.583-22A87.17
aorta, adult.CNhs10498.46-23H111.86
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F55.99
bone (os femoris), neonate N16.CNhs11225.1525-43A67.51
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H727.84
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D112.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.51
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.40
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.82
epididymis, adult.CNhs10490.58-23B211.63
eyeball, adult.CNhs10484.31-12G46.73
eyeball, embryo E12.CNhs11016.345-16C64.29
eyeball, embryo E14.CNhs10521.399-16E25.52
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D44.97
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E24.96
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E24.22
forelimb, embryo E14.CNhs10577.413-26A85.48
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B54.53
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.58
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D515.91
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I93.24
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C84.13
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E32.69
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I333.04
intestine, adult.CNhs10496.178-9A332.53
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D87.09
intestine, embryo E16.CNhs10585.463-22H410.69
intestine, embryo E17.CNhs10582.482-18D312.90
intestine, embryo E18.CNhs10526.1289-20F717.69
intestine, neonate N00.CNhs11126.644-26D127.52
intestine, neonate N01.CNhs11192.1322-23E918.45
intestine, neonate N06.CNhs11102.688-20B812.82
intestine, neonate N07.CNhs11095.720-20F212.73
intestine, neonate N10.CNhs11098.755-23A515.60
intestine, neonate N20.CNhs11187.827-18D115.28
intestine, neonate N25.CNhs11121.1352-25E315.78
intestine, neonate N30.CNhs11131.1384-42G121.51
kidney, embryo E14.CNhs10606.411-4I98.35
kidney, embryo E15.CNhs10997.434-16F86.51
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G76.73
kidney, neonate N10.CNhs11206.758-6D57.15
kidney, neonate N20.CNhs11113.832-19I110.48
kidney, neonate N25.CNhs11122.1353-25F318.53
kidney, neonate N30.CNhs11203.1385-42H116.17
liver, adult pregnant day01.CNhs10466.508-5B261.96
liver, embryo E12.CNhs10601.355-15F86.67
liver, embryo E13.CNhs10524.378-3H66.68
liver, embryo E14.CNhs10594.409-16E16.75
liver, embryo E15.CNhs10520.433-16D711.56
liver, embryo E16.CNhs10523.462-17F510.85
liver, embryo E17.CNhs10510.481-18A317.06
liver, embryo E18.CNhs10579.499-43G430.50
liver, neonate N00.CNhs11117.641-24F419.29
liver, neonate N03.CNhs11123.1345-25G237.89
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H222.33
liver, neonate N10.CNhs11115.751-24B927.15
liver, neonate N20.CNhs11220.823-25A341.17
liver, neonate N25.CNhs11198.1368-26H158.12
liver, neonate N30.CNhs11106.1382-42D145.35
lung, adult.CNhs10474.28-22B112.19
lung, embryo E12.CNhs10522.354-16G25.87
lung, embryo E14.CNhs10604.404-26F83.10
lung, embryo E15.CNhs11020.432-17C54.58
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A65.19
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C68.98
lung, neonate N06.CNhs11212.683-20E54.57
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E65.74
lung, neonate N20.CNhs11109.822-18A48.03
lung, neonate N25.CNhs11119.1359-25C78.29
lung, neonate N30.CNhs11133.1394-42H28.53
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A160.37
mammary gland, adult lactating day02.CNhs10480.595-22B6114.09
mammary gland, adult pregnant day19.CNhs10476.588-5H251.60
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I711.21
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I45.05
oviduct, adult pregnant day01.CNhs10500.988-6G613.03
pancreas, adult.CNhs10486.34-16E4286.73
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F227.51
pancreas, embryo E16.CNhs11003.460-26E5128.06
pancreas, embryo E17.CNhs10599.1558-45G3150.31
pancreas, embryo E18.CNhs10580.1535-43I7144.49
pancreas, neonate N00.CNhs11105.645-26G964.87
pancreas, neonate N01.CNhs11138.1531-43D764.71
pancreas, neonate N02.CNhs11139.1539-43D873.08
pancreas, neonate N16.CNhs11136.787-43B6203.21
pancreas, neonate N25.CNhs11094.1555-45E2297.28
pancreas, neonate N30.CNhs11182.1548-44H5312.50
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E97.31
placenta, adult pregnant day10.CNhs10472.539-13I712.20
placenta, adult pregnant day17.CNhs10464.577-18G39.53
prostate, adult.CNhs10470.859-1F858.44
skin, adult.CNhs10492.30-1C36.76
skin, neonate N00.CNhs11124.650-25G43.39
skin, neonate N03.CNhs11215.662-22H33.74
skin, neonate N06.CNhs11097.693-20I53.34
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I119.82
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G215.72
spleen, embryo E16.CNhs11035.461-43C112.38
spleen, embryo E18.CNhs11011.1271-21F29.07
spleen, neonate N10.CNhs11116.752-24D14.52
spleen, neonate N20.CNhs11112.824-19H16.70
spleen, neonate N25.CNhs11099.1354-25G39.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.80
stomach, adult.CNhs10503.33-1H618.14
stomach, embryo E12.CNhs10588.356-43E34.27
stomach, embryo E15.CNhs10603.1252-16G86.30
stomach, embryo E16.CNhs11022.459-17D48.42
stomach, embryo E17.CNhs11006.1035-18D58.15
stomach, embryo E18.CNhs10999.1286-20C614.41
stomach, neonate N03.CNhs11193.1340-24B813.08
stomach, neonate N07.CNhs11210.718-18A912.89
stomach, neonate N25.CNhs11104.1355-25E417.54
stomach, neonate N30.CNhs11134.1386-42I18.94
submandibular gland, adult.CNhs10469.59-29C1103.76
testis, adult.CNhs10504.57-7G5124.01
testis, embryo E13.CNhs11031.389-23F53.29
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I43.65
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H326.57
testis, neonate N30.CNhs11130.1391-42E254.15
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I45.68
thymus, embryo E15.CNhs11005.430-45I24.42
thymus, embryo E16.CNhs11002.456-26C53.64
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D31.22
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B410.43
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E44.44
uterus, adult pregnant day19.CNhs10497.590-15F524.21
uterus, adult.CNhs10509.92-27E511.90
vagina, adult.CNhs10502.89-27D59.86
vesicular gland, adult.CNhs10491.51-27F866.71
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I86.95
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D27.29
whole body, embryo E14.CNhs10519.395-14B110.90
whole body, embryo E16.CNhs10514.453-14F215.44
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.31
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.23
whole body, embryo E17.5.CNhs10513.490-9F98.49
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B38.42
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D18.82
whole body, neonate N10.CNhs10518.761-6B47.19





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:58329639..58329650,-&oldid=1063292"