FFCP PHASE1:Mm9::chr13:54683057..54683063,+: Difference between revisions
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|id=chr13:54683057..54683063,+ | |id=chr13:54683057..54683063,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.19e-07!43;CL:0000117!1.41e-07!23;CL:0000337!1.41e-07!23;CL:0000540!2.64e-07!33;CL:0000047!2.64e-07!33;CL:0000031!2.64e-07!33;CL:0000404!2.64e-07!33;CL:0000221!3.01e-07!44;CL:0000133!3.01e-07!44 | |ontology_enrichment_celltype=CL:0002319!1.19e-07!43;CL:0000117!1.41e-07!23;CL:0000337!1.41e-07!23;CL:0000540!2.64e-07!33;CL:0000047!2.64e-07!33;CL:0000031!2.64e-07!33;CL:0000404!2.64e-07!33;CL:0000221!3.01e-07!44;CL:0000133!3.01e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.66e-17,23;CL:0000337,2.66e-17,23;CL:0002614,1.23e-15,3;CL:0002613,1.46e-15,3;CL:0000540,4.25e-12,33;CL:0000047,4.25e-12,33;CL:0000031,4.25e-12,33;CL:0000404,4.25e-12,33;CL:0000393,3.02e-10,39;CL:0000211,3.02e-10,39;CL:0002319,2.69e-09,43;CL:0000221,4.37e-09,44;CL:0000133,4.37e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.75e-08!75;UBERON:0001016!6.75e-08!75;UBERON:0001017!1.04e-07!73;UBERON:0005743!1.04e-07!73;UBERON:0002420!2.63e-07!8;UBERON:0007245!2.63e-07!8;UBERON:0010009!2.63e-07!8;UBERON:0010011!2.63e-07!8;UBERON:0000454!2.63e-07!8;UBERON:0002346!3.36e-07!71;UBERON:0003075!3.36e-07!71;UBERON:0007284!3.36e-07!71;UBERON:0004121!3.97e-07!102;UBERON:0000924!3.97e-07!102;UBERON:0006601!3.97e-07!102 | |ontology_enrichment_uberon=UBERON:0000073!6.75e-08!75;UBERON:0001016!6.75e-08!75;UBERON:0001017!1.04e-07!73;UBERON:0005743!1.04e-07!73;UBERON:0002420!2.63e-07!8;UBERON:0007245!2.63e-07!8;UBERON:0010009!2.63e-07!8;UBERON:0010011!2.63e-07!8;UBERON:0000454!2.63e-07!8;UBERON:0002346!3.36e-07!71;UBERON:0003075!3.36e-07!71;UBERON:0007284!3.36e-07!71;UBERON:0004121!3.97e-07!102;UBERON:0000924!3.97e-07!102;UBERON:0006601!3.97e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,2.51e-22,8;UBERON:0007245,2.51e-22,8;UBERON:0010009,2.51e-22,8;UBERON:0010011,2.51e-22,8;UBERON:0000454,2.51e-22,8;UBERON:0002038,1.23e-15,3;UBERON:0009663,1.23e-15,3;UBERON:0009661,1.23e-15,3;UBERON:0000125,1.23e-15,3;UBERON:0002308,1.23e-15,3;UBERON:0002950,5.57e-12,4;UBERON:0001891,5.57e-12,4;UBERON:0009616,5.57e-12,4;UBERON:0010286,5.57e-12,4;UBERON:0000369,9.83e-10,5;UBERON:0002435,9.83e-10,5;UBERON:0000204,9.83e-10,5;UBERON:0010082,9.83e-10,5;UBERON:0003528,1.06e-09,29;UBERON:0002791,1.06e-09,29;UBERON:0001893,1.06e-09,29;UBERON:0002020,2.68e-08,34;UBERON:0002780,2.98e-07,39;UBERON:0001890,2.98e-07,39;UBERON:0006240,2.98e-07,39;UBERON:0003080,4.49e-07,40 | |||
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| ||
|short_description=p@chr13:54683057..54683063,+ | |short_description=p@chr13:54683057..54683063,+ | ||
}} | }} |
Revision as of 23:17, 14 November 2012
Short description: | p@chr13:54683057..54683063, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:54683057..54683063, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.66e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.66e-17 | 23 |
neuron of the substantia nigra | 1.23e-15 | 3 |
striatum neuron | 1.46e-15 | 3 |
neuron | 4.25e-12 | 33 |
neuronal stem cell | 4.25e-12 | 33 |
neuroblast | 4.25e-12 | 33 |
electrically signaling cell | 4.25e-12 | 33 |
electrically responsive cell | 3.02e-10 | 39 |
electrically active cell | 3.02e-10 | 39 |
neural cell | 2.69e-09 | 43 |
ectodermal cell | 4.37e-09 | 44 |
neurectodermal cell | 4.37e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
basal ganglion | 2.51e-22 | 8 |
nuclear complex of neuraxis | 2.51e-22 | 8 |
aggregate regional part of brain | 2.51e-22 | 8 |
collection of basal ganglia | 2.51e-22 | 8 |
cerebral subcortex | 2.51e-22 | 8 |
substantia nigra | 1.23e-15 | 3 |
telencephalic nucleus | 1.23e-15 | 3 |
midbrain nucleus | 1.23e-15 | 3 |
neural nucleus | 1.23e-15 | 3 |
nucleus of brain | 1.23e-15 | 3 |
regional part of midbrain | 5.57e-12 | 4 |
midbrain | 5.57e-12 | 4 |
presumptive midbrain | 5.57e-12 | 4 |
midbrain neural tube | 5.57e-12 | 4 |
corpus striatum | 9.83e-10 | 5 |
striatum | 9.83e-10 | 5 |
ventral part of telencephalon | 9.83e-10 | 5 |
future corpus striatum | 9.83e-10 | 5 |
brain grey matter | 1.06e-09 | 29 |
regional part of telencephalon | 1.06e-09 | 29 |
telencephalon | 1.06e-09 | 29 |
gray matter | 2.68e-08 | 34 |
regional part of forebrain | 2.98e-07 | 39 |
forebrain | 2.98e-07 | 39 |
future forebrain | 2.98e-07 | 39 |
anterior neural tube | 4.49e-07 | 40 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.