Personal tools

FFCP PHASE1:Mm9::chr1:75139336..75139347,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=CL:0000117!9.12e-08!23;CL:0000337!9.12e-08!23
|ontology_enrichment_celltype=CL:0000117!9.12e-08!23;CL:0000337!9.12e-08!23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0001049!4.55e-19!52;UBERON:0005068!4.55e-19!52;UBERON:0006241!4.55e-19!52;UBERON:0007135!4.55e-19!52;UBERON:0001017!1.26e-17!73;UBERON:0005743!1.26e-17!73;UBERON:0000073!1.47e-17!75;UBERON:0001016!1.47e-17!75;UBERON:0000955!1.25e-16!50;UBERON:0006238!1.25e-16!50;UBERON:0002616!2.90e-16!49;UBERON:0004121!2.26e-15!102;UBERON:0000924!2.26e-15!102;UBERON:0006601!2.26e-15!102;UBERON:0002346!7.83e-15!71;UBERON:0003075!7.83e-15!71;UBERON:0007284!7.83e-15!71;UBERON:0002020!4.01e-14!34;UBERON:0000033!6.22e-14!63;UBERON:0003080!2.40e-13!40;UBERON:0002780!7.87e-13!39;UBERON:0001890!7.87e-13!39;UBERON:0006240!7.87e-13!39;UBERON:0003056!1.66e-11!49;UBERON:0002791!1.79e-11!29;UBERON:0003528!1.79e-11!29;UBERON:0001893!1.79e-11!29;UBERON:0000025!2.00e-08!114;UBERON:0004111!4.35e-08!122;UBERON:0000956!6.50e-08!21;UBERON:0001869!6.50e-08!21;UBERON:0000203!6.50e-08!21;UBERON:0002021!8.78e-07!10;UBERON:0000411!8.78e-07!10;UBERON:0001950!8.78e-07!10
|phase1_expression=1.92178616525753,2.44282785347553,2.72999543633722,2.72217790176147,4.50806156951712,1.00727563147134,1.86890112476421,2.96983643915625,0,0.234064526321993,0.171217968225505,1.03703806693937,1.36960583944965,2.27293046289393,1.99865857089398,2.22722794128809,2.79824751251259,1.57731082679119,0.959801035240171,2.54633791078818,7.14363637268986,1.48936426801328,1.30599894569468,1.91990907352088,1.60586496747019,2.8711598205751,1.29228598847722,0.646413698057667,3.6104449696711,3.02436155711917,1.99557459589774,2.54012269383853,3.69038872550742,0,1.44425809875637,1.99481574430191,2.24586291888606,2.51118978442145,3.906676722619,2.09409497589519,2.94115744015507,2.73218193983378,2.91306211818692,2.14024590558481,3.04130793658544,3.12029478674859,2.34717403304412,4.57852828398938,2.63623419281366,3.30530828426282,3.91961980551015,7.18762821824858,1.8456086666351,2.17608642603403,2.01656279485478,2.05807548828758,3.43840127926508,1.54701627683233,5.26022798234954,6.34789175126439,3.80298842103708,2.71075625655306,0.889294796111139,8.09909745553259,5.93319817540185,7.104801149461,4.19440154725767,7.30014780110954,3.21437798156281,3.51015439662396,3.36519938162211,6.28432165688368,8.39300455616131,2.57230678351403,2.87536413054709,0.919218786610021,1.10115880999389,6.63974158042976,6.60508093001847,4.2203612073662,5.94669683415663,3.64639359389732,5.58365998002762,5.6276261003168,5.80633341551878,7.07108605136802,5.55249555116501,4.47358669980721,2.42323818666189,2.04043212288321,1.73918693221007,6.0229671388697,3.39985666853875,4.31762553310254,1.29955283489534,4.48026887097336,2.10666630197628,1.53387290320252,2.85764605063156,1.7666978725517,1.12674735821344,0,2.54805239706646,7.11066703153331,2.81438353314578,1.01343946190039,0,3.9964357901671,0.776813650941515,2.9688427812965,1.90833859442749,2.13125834818499,3.68984795609694,2.26083960828934,1.99900802130698,1.75933227861546,4.94389935468748,1.44599356919912,6.19227386364912,2.10296904931632,1.54589062922275,1.93950101254089,3.72783522436244,7.90508151931177,6.49284791121711,1.78819938646014,1.07833612055328,2.39961092397363,1.39777249780371,6.14141621559773,10.0650132620098,4.02093926761166,8.16974304903699,7.16003280524926,4.57133698031032,5.353961681236,1.73126918545538,1.49288364732112,3.0326731012041,3.78795340595653,0.910843100738926,2.29902104433473,1.62055916824814,2.86339153887859,1.63287597963187,1.40925092313335,1.78033276663485,2.84573707812917,0.646703978798527,0.189106080167819,0.879755620819744,0.876782929710299,0.556094498451196,1.39300866608867,1.02891068203972,1.79130840136644,1.40442637462647,2.31613116403244,1.42081749697796,0.621377317606506,0.703578179943289,0.540186184383045,1.89395788468168,0.983821158737019,0.925602677324269,0.465067889500816,1.87791380979733,0.583826711835847,0.987359099480883,0.164167464079095,0.405344047729279,1.02339991197733,1.09775057645525,1.47627060636409,6.30869845692382,3.08713837137853,2.64335026387038,0.793351699990633,0.853153002140936,2.78684006232526,0.902072229254653,1.21010114774006,0.667134131534611,0.760902504450237,0.949058123089023,2.79988223030818,3.01602250560323,1.79060824837036,1.16978452271472,3.59527763461689,1.94524244887225,1.39398891278057,1.51734320762465,1.02823661348756,3.38123207019241,0.610953983535943,1.16371492300575,1.75339549725796,1.64414996523069,1.77132177575523,2.19798218977925,3.33172342588861,1.48226313543574,2.16898637430922,0.786235980452812,3.14806957338795,2.43432145666204,2.41177159752417,2.80088436959562,2.30156909960649,3.40483976227574,1.92192989231657,7.18841032636773,3.34926852901653,1.5601883655728,3.78868316920668,2.69096120282868,5.30687873499704,2.58654466233247,1.32643988239339,1.95557971730431,2.03694102930226,0.469380496577004,1.84256883185997,1.19021820443007,1.17080188714679,1.57635144106191,0.221464689648775,2.07291199254733,1.47476983244164,1.55416483679306,2.02508682014116,10.5553898757491,4.89515115436839,1.47529281905711,2.20749397043786,6.74312477948726,4.33683240391152,1.63934945376675,0.757412781613119,1.26203287766503,1.17131623288992,0.861693590931196,1.91175038362042,1.33679204449436,0.566153061577665,0.809621403349789,0.876767573733936,3.95287777946523,3.85585579706168,0.99358059645788,2.31485284767432,2.44330439030364,2.47455184458803,3.98235415019888,1.45668381692989,1.209294227859,1.13163047853539,1.47650946440386,1.53717573971964,2.06742634534577,1.45413491791002,0.356497378384721,1.26414703174326,0,4.12542172992747,4.76615448055303,2.16073312837572,2.45781499187234,1.92903331528433,3.01478397191865,3.74574516964348,1.64549020602121,4.87143918583359,1.64270195644597,3.38931313382112,1.54369878638473,1.81374878235628,2.58343082713449,1.14594557363496,1.67121281604391,2.1338316966858,1.1659233465194,3.8939313422207,2.9048049735635,1.03193433981611,2.40752885580625,2.44878994106098,3.00727300986255,3.20289442489132,0.849892149969277,1.11961161858926,2.07299960706636,0,1.58167996790568,0.813277868507395,0.86404272657441,0.627264888043406,1.31017538247707,2.29269388854195,1.90102948168273,1.57053565190418,2.85152941241944,3.72803587852155,28.1846469342095,1.64468200648377,2.31641886639937,3.11121901350476,2.71235629303235,2.02747350588934,1.40828686374905,2.604087696879,2.41176492179135,12.0792060413003,19.5860404255349,1.26404448251271,1.82452693761148,2.15693010046137,1.29920822977795,1.25318686967237,0.79472541912506,0.841368146639782,0.443068581523732,0.706765149637033,1.06689529317,0.604957110821043,0.877120926657772,0.577271049841977,0.818138315270983,1.58711268530648,0.665957860122194,0.269141569828427,0.839423081820392,1.9318959403219,1.50145980360946,1.83151624267265,1.92931541171159,2.50786052017682,7.34177395402186,7.36520378411483,6.30185064783336,6.70227411140382,10.2762377965596,4.5323633843382,4.72515750162264,7.65546045481175,5.43770890781046,5.69536342927002,0.518936737920883,0.798049746802062,0.682934423016537,2.18796045361465,0.838452650511929,1.10306105070008,3.11145418922261,2.06035057238894,1.92551525755089,1.51618327058278,2.5347929989024,1.50901073108861,0.842773567228942,1.6646539625266,1.43588672389033,0.952587382566147,1.62238056322798,0.77163688185482,0.412085900803307,2.20798380201596,1.37147700954166,1.77475806159337,0.953744759789284,2.18019624948493,2.07040636913727,1.52306294205018,3.47563148458268,1.05227884575137,2.30866993537965,1.68342681497322,1.42362021749009,0.886540341380071,2.45538625901814,1.54936841185966,0.964533054905707,1.49886346762768,1.63752125911786,1.28922632428979,1.53030665655075,2.8676884485537,1.85494268496337
|phase1_expression=1.92178616525753,2.44282785347553,2.72999543633722,2.72217790176147,4.50806156951712,1.00727563147134,1.86890112476421,2.96983643915625,0,0.234064526321993,0.171217968225505,1.03703806693937,1.36960583944965,2.27293046289393,1.99865857089398,2.22722794128809,2.79824751251259,1.57731082679119,0.959801035240171,2.54633791078818,7.14363637268986,1.48936426801328,1.30599894569468,1.91990907352088,1.60586496747019,2.8711598205751,1.29228598847722,0.646413698057667,3.6104449696711,3.02436155711917,1.99557459589774,2.54012269383853,3.69038872550742,0,1.44425809875637,1.99481574430191,2.24586291888606,2.51118978442145,3.906676722619,2.09409497589519,2.94115744015507,2.73218193983378,2.91306211818692,2.14024590558481,3.04130793658544,3.12029478674859,2.34717403304412,4.57852828398938,2.63623419281366,3.30530828426282,3.91961980551015,7.18762821824858,1.8456086666351,2.17608642603403,2.01656279485478,2.05807548828758,3.43840127926508,1.54701627683233,5.26022798234954,6.34789175126439,3.80298842103708,2.71075625655306,0.889294796111139,8.09909745553259,5.93319817540185,7.104801149461,4.19440154725767,7.30014780110954,3.21437798156281,3.51015439662396,3.36519938162211,6.28432165688368,8.39300455616131,2.57230678351403,2.87536413054709,0.919218786610021,1.10115880999389,6.63974158042976,6.60508093001847,4.2203612073662,5.94669683415663,3.64639359389732,5.58365998002762,5.6276261003168,5.80633341551878,7.07108605136802,5.55249555116501,4.47358669980721,2.42323818666189,2.04043212288321,1.73918693221007,6.0229671388697,3.39985666853875,4.31762553310254,1.29955283489534,4.48026887097336,2.10666630197628,1.53387290320252,2.85764605063156,1.7666978725517,1.12674735821344,0,2.54805239706646,7.11066703153331,2.81438353314578,1.01343946190039,0,3.9964357901671,0.776813650941515,2.9688427812965,1.90833859442749,2.13125834818499,3.68984795609694,2.26083960828934,1.99900802130698,1.75933227861546,4.94389935468748,1.44599356919912,6.19227386364912,2.10296904931632,1.54589062922275,1.93950101254089,3.72783522436244,7.90508151931177,6.49284791121711,1.78819938646014,1.07833612055328,2.39961092397363,1.39777249780371,6.14141621559773,10.0650132620098,4.02093926761166,8.16974304903699,7.16003280524926,4.57133698031032,5.353961681236,1.73126918545538,1.49288364732112,3.0326731012041,3.78795340595653,0.910843100738926,2.29902104433473,1.62055916824814,2.86339153887859,1.63287597963187,1.40925092313335,1.78033276663485,2.84573707812917,0.646703978798527,0.189106080167819,0.879755620819744,0.876782929710299,0.556094498451196,1.39300866608867,1.02891068203972,1.79130840136644,1.40442637462647,2.31613116403244,1.42081749697796,0.621377317606506,0.703578179943289,0.540186184383045,1.89395788468168,0.983821158737019,0.925602677324269,0.465067889500816,1.87791380979733,0.583826711835847,0.987359099480883,0.164167464079095,0.405344047729279,1.02339991197733,1.09775057645525,1.47627060636409,6.30869845692382,3.08713837137853,2.64335026387038,0.793351699990633,0.853153002140936,2.78684006232526,0.902072229254653,1.21010114774006,0.667134131534611,0.760902504450237,0.949058123089023,2.79988223030818,3.01602250560323,1.79060824837036,1.16978452271472,3.59527763461689,1.94524244887225,1.39398891278057,1.51734320762465,1.02823661348756,3.38123207019241,0.610953983535943,1.16371492300575,1.75339549725796,1.64414996523069,1.77132177575523,2.19798218977925,3.33172342588861,1.48226313543574,2.16898637430922,0.786235980452812,3.14806957338795,2.43432145666204,2.41177159752417,2.80088436959562,2.30156909960649,3.40483976227574,1.92192989231657,7.18841032636773,3.34926852901653,1.5601883655728,3.78868316920668,2.69096120282868,5.30687873499704,2.58654466233247,1.32643988239339,1.95557971730431,2.03694102930226,0.469380496577004,1.84256883185997,1.19021820443007,1.17080188714679,1.57635144106191,0.221464689648775,2.07291199254733,1.47476983244164,1.55416483679306,2.02508682014116,10.5553898757491,4.89515115436839,1.47529281905711,2.20749397043786,6.74312477948726,4.33683240391152,1.63934945376675,0.757412781613119,1.26203287766503,1.17131623288992,0.861693590931196,1.91175038362042,1.33679204449436,0.566153061577665,0.809621403349789,0.876767573733936,3.95287777946523,3.85585579706168,0.99358059645788,2.31485284767432,2.44330439030364,2.47455184458803,3.98235415019888,1.45668381692989,1.209294227859,1.13163047853539,1.47650946440386,1.53717573971964,2.06742634534577,1.45413491791002,0.356497378384721,1.26414703174326,0,4.12542172992747,4.76615448055303,2.16073312837572,2.45781499187234,1.92903331528433,3.01478397191865,3.74574516964348,1.64549020602121,4.87143918583359,1.64270195644597,3.38931313382112,1.54369878638473,1.81374878235628,2.58343082713449,1.14594557363496,1.67121281604391,2.1338316966858,1.1659233465194,3.8939313422207,2.9048049735635,1.03193433981611,2.40752885580625,2.44878994106098,3.00727300986255,3.20289442489132,0.849892149969277,1.11961161858926,2.07299960706636,0,1.58167996790568,0.813277868507395,0.86404272657441,0.627264888043406,1.31017538247707,2.29269388854195,1.90102948168273,1.57053565190418,2.85152941241944,3.72803587852155,28.1846469342095,1.64468200648377,2.31641886639937,3.11121901350476,2.71235629303235,2.02747350588934,1.40828686374905,2.604087696879,2.41176492179135,12.0792060413003,19.5860404255349,1.26404448251271,1.82452693761148,2.15693010046137,1.29920822977795,1.25318686967237,0.79472541912506,0.841368146639782,0.443068581523732,0.706765149637033,1.06689529317,0.604957110821043,0.877120926657772,0.577271049841977,0.818138315270983,1.58711268530648,0.665957860122194,0.269141569828427,0.839423081820392,1.9318959403219,1.50145980360946,1.83151624267265,1.92931541171159,2.50786052017682,7.34177395402186,7.36520378411483,6.30185064783336,6.70227411140382,10.2762377965596,4.5323633843382,4.72515750162264,7.65546045481175,5.43770890781046,5.69536342927002,0.518936737920883,0.798049746802062,0.682934423016537,2.18796045361465,0.838452650511929,1.10306105070008,3.11145418922261,2.06035057238894,1.92551525755089,1.51618327058278,2.5347929989024,1.50901073108861,0.842773567228942,1.6646539625266,1.43588672389033,0.952587382566147,1.62238056322798,0.77163688185482,0.412085900803307,2.20798380201596,1.37147700954166,1.77475806159337,0.953744759789284,2.18019624948493,2.07040636913727,1.52306294205018,3.47563148458268,1.05227884575137,2.30866993537965,1.68342681497322,1.42362021749009,0.886540341380071,2.45538625901814,1.54936841185966,0.964533054905707,1.49886346762768,1.63752125911786,1.28922632428979,1.53030665655075,2.8676884485537,1.85494268496337
|short_description=p3@Fam134a
|short_description=p3@Fam134a
}}
}}

Revision as of 07:22, 19 April 2012

Short description:p3@Fam134a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Fam134a_5end
Coexpression cluster:NA
Association with transcript: -12bp_to_ENSMUST00000060113, ENSMUST00000097694, NM_170755, uc007bnt.1, uc007bnu.1_5end
EntrezGene:Fam134a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Fam134a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.27
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B93.61
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D92.42
Mouse Schwann, donor2.CNhs12573.11746-123F92.04
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D72.97
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A84.94
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I26.49
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A46.14
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F14.02
cortex, adult.CNhs10473.12-14D58.17
cortex, neonate N30.CNhs11107.1392-42F27.16
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G13.09
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H13.33
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F43.40
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C26.74
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G528.18
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H312.08
testis, neonate N30.CNhs11130.1391-42E219.59
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I22.16
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:75139336..75139347,%2B&oldid=1042797"