Personal tools

FFCP PHASE1:Mm9::chr5:66254802..66254889,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=CL:0000988!2.72e-10!32;CL:0002032!2.72e-10!32;CL:0000037!2.72e-10!32;CL:0000566!2.72e-10!32;CL:0000837!2.72e-10!32;CL:0000838!8.05e-09!12;CL:0002031!3.16e-08!25;CL:0000084!3.31e-08!11;CL:0000827!3.31e-08!11;CL:0000542!9.79e-08!13;CL:0000051!9.79e-08!13;CL:0000738!1.46e-07!17;CL:0002087!1.46e-07!17;CL:0000791!4.54e-07!9;CL:0000789!4.54e-07!9;CL:0002420!4.54e-07!9;CL:0002419!4.54e-07!9;CL:0000790!4.54e-07!9
|ontology_enrichment_celltype=CL:0000988!2.72e-10!32;CL:0002032!2.72e-10!32;CL:0000037!2.72e-10!32;CL:0000566!2.72e-10!32;CL:0000837!2.72e-10!32;CL:0000838!8.05e-09!12;CL:0002031!3.16e-08!25;CL:0000084!3.31e-08!11;CL:0000827!3.31e-08!11;CL:0000542!9.79e-08!13;CL:0000051!9.79e-08!13;CL:0000738!1.46e-07!17;CL:0002087!1.46e-07!17;CL:0000791!4.54e-07!9;CL:0000789!4.54e-07!9;CL:0002420!4.54e-07!9;CL:0002419!4.54e-07!9;CL:0000790!4.54e-07!9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0002193!2.53e-19!48;UBERON:0002390!7.49e-18!45;UBERON:0003061!7.49e-18!45;UBERON:0002405!9.91e-17!70;UBERON:0004177!6.41e-12!29;UBERON:0003408!9.47e-10!24;UBERON:0003081!1.37e-09!88;UBERON:0005057!1.38e-09!51;UBERON:0002370!1.98e-09!23;UBERON:0000974!1.98e-09!23;UBERON:0004807!1.98e-09!23;UBERON:0005058!1.98e-09!23;UBERON:0003351!1.98e-09!23;UBERON:0009113!1.98e-09!23;UBERON:0003295!1.98e-09!23;UBERON:0009722!1.98e-09!23;UBERON:0005562!1.98e-09!23;UBERON:0007690!1.98e-09!23;UBERON:0006562!1.08e-08!24;UBERON:0001557!1.08e-08!24;UBERON:0001042!1.08e-08!24;UBERON:0008814!1.08e-08!24;UBERON:0009145!1.08e-08!24;UBERON:0002371!8.88e-07!16
|phase1_expression=0,0,0,0,0,0,0,305.634906586211,65.88912196698,84.0291649495957,70.0281490042315,54.8832453887915,212.288905114695,199.493358320152,18.3210368998615,34.2183201888806,13.2916756844348,156.311502935007,152.059906868764,157.024171165271,6.88850650223665,88.3689465687879,93.2483247225999,10.8794847499517,14.2233754261645,0,0,0,2.66032787238923,3.52842181663903,2.21730510655305,0,0,0,0,0,0,25.1118978442145,17.9707129240474,29.8408534065065,42.352667138233,32.7861832780054,36.8987868303677,0,0,0,0,0,0,0,0,0,139.259563027921,168.284016946632,158.972366994385,0.257259436035947,0.286533439938757,0,0.202316460859598,0.528990979272033,0,0,0,13.9484456178617,18.7884608887725,8.5257613793532,4.19440154725767,1.15265491596466,0.311068836925433,0.270011876663381,0.210324961351382,1.14260393761521,0.441737081903227,0,0.0958454710182364,0,1.10115880999389,0.766124028511126,0.614426133024974,0,0.274462930807229,1.56274011167028,0,1.12552522006336,1.37518422999129,0.294628585473668,0.427115042397309,0.186399445825301,1.13589289999776,0.0755715601067855,0.869593466105033,4.30211938490693,0,0.539703191637817,0,0,10.6737759300131,0,0,0,0.14084341977668,0,0,0,0,0,0,8.79215873836762,116.522047641227,2.67195850316685,1.04091196059682,1.21786191324856,0.691846491768175,0.150722640552623,0.940709657085638,0.251333182659351,0,1.87979163995885,14.153768831198,3.72063754879041,15.2380647737672,15.5160081003271,1.86391761218122,0,0,4.59822699375465,38.4606549664004,47.9922184794726,35.1984528992389,0.299581278809645,1.37250180845588,0,0.869121600961382,0.767146371990992,0.83115217823824,0.648965052271031,1.2220723662038,16.9193480029727,0.505445516867349,0.631325567659422,0.520481771850815,0.689706313300419,0.180062129805349,0.452114453507145,0.204109497453984,0.2562274405697,0.468508622798644,0,0,0.189106080167819,0.351902248327898,1.09597866213787,1.66828349535359,1.39300866608867,2.05782136407943,0.59710280045548,26.6841011179029,21.3598762905214,19.3231179589003,0,0.469052119962192,0.720248245844059,0,1.37734962223183,0.462801338662135,1.16266972375204,0,1.05088808130453,0.493679549740441,1.80584210487005,1.29710095273369,2.63159977365598,2.19550115291051,2.54992195644706,0.210289948564127,0.205809224758569,6.93879444265976,1.05780226665418,0.213288250535234,0.232236671860439,1.15980715189884,1.00841762311671,0.444756087689741,0.951128130562796,4.2707615539006,0.988193728344065,1.50801125280162,0.994782360205754,1.75467678407208,4.49409704327111,3.02593269824572,2.19055400579804,0.569003702859245,0.685491075658373,1.1270773567308,0,0.387904974335251,0.140271639780637,0.442655759869801,0.147610147979602,0.784993639206874,0.370191491765402,0.889357881261447,1.66845105716094,0.982794975566015,2.02375901146368,1.42002084971952,2.41177159752417,3.56476192493988,4.89083433666378,7.62035565842666,6.31491250332587,4.31304619582064,4.09355042435354,4.36852742360385,2.27320990152401,0.896987067609561,0,12.7479701214957,0.947457058852424,0,0.169745085775188,1.17345124144251,4.02015017860358,0.238043640886014,1.17080188714679,1.7339865851681,2.87904096543407,4.46473352240964,13.6006551214063,10.0157289482219,8.38964539772767,4.52373851817817,1.08781136763742,5.4094070032094,5.51873492609465,0.321101179975584,1.05490517932983,0,2.27223834483936,0,0,0,0,0,0,0,0,0,0.963963949265421,1.13552068166615,1.6025904330053,1.30309567482861,0.989820737835213,3.98235415019888,0.728341908464944,0.906970670894253,0.754420319023592,0.590603785761546,0.614870295887855,1.03371317267288,1.09060118843252,2.13898427030833,5.68866164284469,1.05418608574999,2.06271086496374,0.340439605753788,0.36012218806262,0.388076051348264,0.643011105094777,0.177340233642274,0.178368817602071,0.822745103010605,0.608929898229199,0.23467170806371,0.21183207086382,0.661585194164886,0.8244312647074,1.29171541356724,0.784068024066026,0.596861720015682,0.492422699235184,3.49777003955821,0.556275906031529,35.5411432059534,5.15967169908056,9.25972636848558,17.8950034154456,35.6771934351876,33.6303914613588,43.0045427884454,55.2808236678449,45.329591407851,0,0.158167996790568,0.203319467126849,0.756037385752609,0.209088296014469,1.09181281873089,0.944050424693745,1.48776220305605,1.04702376793612,2.07383957266869,8.07741107013003,0,0.149516546043979,0.330916980914195,0.388902376688095,1.93739735216597,1.01373675294467,0.821500670520278,0.2604087696879,0.209718688851422,0,0,151.369326780897,25.3406519112705,35.4352802218654,65.2202531348531,76.4443990500146,105.30111803407,110.099031760291,124.797650462518,150.944842672481,117.51089586201,168.581381548797,154.860572495467,177.99190703461,193.898780719223,0.226730383615211,0,0,0,1.15913756419314,2.064507229963,1.28206136987086,1.50057865355346,2.00628841614145,1.12950368523413,1.38097570952153,3.43737308063638,0.171853182343688,0,0.755393897389701,1.35004500046361,0.900642406448441,0.906284817968409,0,0,0,0.682934423016537,1.45864030240976,1.46729213839588,1.2869045591501,1.11123363900808,2.06035057238894,2.56735367673452,1.51618327058278,2.02783439912192,0.943131706930381,1.21733959710847,1.85672941974121,1.37845125493472,1.42888107384922,0.927074607558844,2.50781986602817,1.64834360321323,1.61918812147837,0.685738504770831,1.59728225543404,1.90748951957857,1.0174249164263,1.50575008664529,1.4384483341585,1.46342378298218,1.05227884575137,0.543216455383447,3.36685362994643,1.30498519936592,1.57607171800902,1.63692417267876,2.32405261778949,2.70069255373598,0.749431733813838,1.87145286756327,3.65280791882107,1.14772999241306,3.75005412503176,3.94175320554716
|phase1_expression=0,0,0,0,0,0,0,305.634906586211,65.88912196698,84.0291649495957,70.0281490042315,54.8832453887915,212.288905114695,199.493358320152,18.3210368998615,34.2183201888806,13.2916756844348,156.311502935007,152.059906868764,157.024171165271,6.88850650223665,88.3689465687879,93.2483247225999,10.8794847499517,14.2233754261645,0,0,0,2.66032787238923,3.52842181663903,2.21730510655305,0,0,0,0,0,0,25.1118978442145,17.9707129240474,29.8408534065065,42.352667138233,32.7861832780054,36.8987868303677,0,0,0,0,0,0,0,0,0,139.259563027921,168.284016946632,158.972366994385,0.257259436035947,0.286533439938757,0,0.202316460859598,0.528990979272033,0,0,0,13.9484456178617,18.7884608887725,8.5257613793532,4.19440154725767,1.15265491596466,0.311068836925433,0.270011876663381,0.210324961351382,1.14260393761521,0.441737081903227,0,0.0958454710182364,0,1.10115880999389,0.766124028511126,0.614426133024974,0,0.274462930807229,1.56274011167028,0,1.12552522006336,1.37518422999129,0.294628585473668,0.427115042397309,0.186399445825301,1.13589289999776,0.0755715601067855,0.869593466105033,4.30211938490693,0,0.539703191637817,0,0,10.6737759300131,0,0,0,0.14084341977668,0,0,0,0,0,0,8.79215873836762,116.522047641227,2.67195850316685,1.04091196059682,1.21786191324856,0.691846491768175,0.150722640552623,0.940709657085638,0.251333182659351,0,1.87979163995885,14.153768831198,3.72063754879041,15.2380647737672,15.5160081003271,1.86391761218122,0,0,4.59822699375465,38.4606549664004,47.9922184794726,35.1984528992389,0.299581278809645,1.37250180845588,0,0.869121600961382,0.767146371990992,0.83115217823824,0.648965052271031,1.2220723662038,16.9193480029727,0.505445516867349,0.631325567659422,0.520481771850815,0.689706313300419,0.180062129805349,0.452114453507145,0.204109497453984,0.2562274405697,0.468508622798644,0,0,0.189106080167819,0.351902248327898,1.09597866213787,1.66828349535359,1.39300866608867,2.05782136407943,0.59710280045548,26.6841011179029,21.3598762905214,19.3231179589003,0,0.469052119962192,0.720248245844059,0,1.37734962223183,0.462801338662135,1.16266972375204,0,1.05088808130453,0.493679549740441,1.80584210487005,1.29710095273369,2.63159977365598,2.19550115291051,2.54992195644706,0.210289948564127,0.205809224758569,6.93879444265976,1.05780226665418,0.213288250535234,0.232236671860439,1.15980715189884,1.00841762311671,0.444756087689741,0.951128130562796,4.2707615539006,0.988193728344065,1.50801125280162,0.994782360205754,1.75467678407208,4.49409704327111,3.02593269824572,2.19055400579804,0.569003702859245,0.685491075658373,1.1270773567308,0,0.387904974335251,0.140271639780637,0.442655759869801,0.147610147979602,0.784993639206874,0.370191491765402,0.889357881261447,1.66845105716094,0.982794975566015,2.02375901146368,1.42002084971952,2.41177159752417,3.56476192493988,4.89083433666378,7.62035565842666,6.31491250332587,4.31304619582064,4.09355042435354,4.36852742360385,2.27320990152401,0.896987067609561,0,12.7479701214957,0.947457058852424,0,0.169745085775188,1.17345124144251,4.02015017860358,0.238043640886014,1.17080188714679,1.7339865851681,2.87904096543407,4.46473352240964,13.6006551214063,10.0157289482219,8.38964539772767,4.52373851817817,1.08781136763742,5.4094070032094,5.51873492609465,0.321101179975584,1.05490517932983,0,2.27223834483936,0,0,0,0,0,0,0,0,0,0.963963949265421,1.13552068166615,1.6025904330053,1.30309567482861,0.989820737835213,3.98235415019888,0.728341908464944,0.906970670894253,0.754420319023592,0.590603785761546,0.614870295887855,1.03371317267288,1.09060118843252,2.13898427030833,5.68866164284469,1.05418608574999,2.06271086496374,0.340439605753788,0.36012218806262,0.388076051348264,0.643011105094777,0.177340233642274,0.178368817602071,0.822745103010605,0.608929898229199,0.23467170806371,0.21183207086382,0.661585194164886,0.8244312647074,1.29171541356724,0.784068024066026,0.596861720015682,0.492422699235184,3.49777003955821,0.556275906031529,35.5411432059534,5.15967169908056,9.25972636848558,17.8950034154456,35.6771934351876,33.6303914613588,43.0045427884454,55.2808236678449,45.329591407851,0,0.158167996790568,0.203319467126849,0.756037385752609,0.209088296014469,1.09181281873089,0.944050424693745,1.48776220305605,1.04702376793612,2.07383957266869,8.07741107013003,0,0.149516546043979,0.330916980914195,0.388902376688095,1.93739735216597,1.01373675294467,0.821500670520278,0.2604087696879,0.209718688851422,0,0,151.369326780897,25.3406519112705,35.4352802218654,65.2202531348531,76.4443990500146,105.30111803407,110.099031760291,124.797650462518,150.944842672481,117.51089586201,168.581381548797,154.860572495467,177.99190703461,193.898780719223,0.226730383615211,0,0,0,1.15913756419314,2.064507229963,1.28206136987086,1.50057865355346,2.00628841614145,1.12950368523413,1.38097570952153,3.43737308063638,0.171853182343688,0,0.755393897389701,1.35004500046361,0.900642406448441,0.906284817968409,0,0,0,0.682934423016537,1.45864030240976,1.46729213839588,1.2869045591501,1.11123363900808,2.06035057238894,2.56735367673452,1.51618327058278,2.02783439912192,0.943131706930381,1.21733959710847,1.85672941974121,1.37845125493472,1.42888107384922,0.927074607558844,2.50781986602817,1.64834360321323,1.61918812147837,0.685738504770831,1.59728225543404,1.90748951957857,1.0174249164263,1.50575008664529,1.4384483341585,1.46342378298218,1.05227884575137,0.543216455383447,3.36685362994643,1.30498519936592,1.57607171800902,1.63692417267876,2.32405261778949,2.70069255373598,0.749431733813838,1.87145286756327,3.65280791882107,1.14772999241306,3.75005412503176,3.94175320554716
|short_description=p1@Rhoh
|short_description=p1@Rhoh
}}
}}

Revision as of 16:27, 19 April 2012

Short description:p1@Rhoh
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rhoh_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000031106, NM_001081105, uc008xoe.1_5end
EntrezGene:Rhoh
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rhoh

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9305.63
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E765.89
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F284.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E670.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F154.88
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4212.29
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8199.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A118.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A334.22
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2156.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4152.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6157.02
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H288.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I993.25
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.22
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G825.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H117.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H329.84
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G942.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H232.79
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H436.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2139.26
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9168.28
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1158.97
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E718.79
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.79
accessory axillary lymph node, adult.CNhs10475.1063-29H9116.52
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G214.15
bone (os femoris), neonate N02.CNhs11227.1985-43F53.72
bone (os femoris), neonate N16.CNhs11225.1525-43A615.24
bone (os femoris), neonate N20.CNhs11195.1350-25C315.52
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C738.46
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D147.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D435.20
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.92
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C826.68
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D221.36
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.32
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D22.55
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F47.62
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B112.75
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A64.02
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E64.46
lung, neonate N20.CNhs11109.822-18A413.60
lung, neonate N25.CNhs11119.1359-25C710.02
lung, neonate N30.CNhs11133.1394-42H28.39
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H25.52
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G235.54
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F29.26
spleen, neonate N10.CNhs11116.752-24D117.90
spleen, neonate N20.CNhs11112.824-19H135.68
spleen, neonate N25.CNhs11099.1354-25G333.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C643.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C955.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D345.33
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B5151.37
thymus, embryo E14.CNhs11041.402-44I425.34
thymus, embryo E15.CNhs11005.430-45I235.44
thymus, embryo E16.CNhs11002.456-26C565.22
thymus, embryo E17.CNhs10581.478-18C176.44
thymus, embryo E18.CNhs10595.1273-19G4105.30
thymus, neonate N02.CNhs11181.1541-43F8110.10
thymus, neonate N03.CNhs11137.2104-43C7124.80
thymus, neonate N06.CNhs11197.681-26C4150.94
thymus, neonate N07.CNhs11211.713-19D3117.51
thymus, neonate N10.CNhs11194.748-24E4168.58
thymus, neonate N20.CNhs11186.820-7A2154.86
thymus, neonate N25.CNhs11125.1362-25G7177.99
thymus, neonate N30.CNhs11132.1393-42G2193.90
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:66254802..66254889,%2B&oldid=1090884"