Personal tools

FFCP PHASE1:Mm9::chr6:125165590..125165609,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=
|phase1_expression=11.8510146857548,23.7303277194766,20.9299650119187,47.4868811751723,55.0985302940982,21.9921846204576,16.3528848416868,55.3939057564362,25.0603925429967,31.5987110534691,8.90333434772626,8.21653237651965,62.4882664248901,60.7571796812032,7.99463428357591,11.7435655086099,3.49780939064073,60.0955425007443,57.0396043799873,53.0487064747538,54.5977922769868,17.3759164601549,18.5451850288644,8.63959083084396,8.71755268055246,14.9300310669905,9.04600191934057,11.635446565038,4.94060890586572,4.28451220591882,4.6563407237614,19.0509202037889,10.4561013889377,31.6963362030877,14.1537293678125,4.82080471539628,19.3960888449251,12.9744805528441,9.37602413428561,11.5175223674236,11.1763982725893,10.2456822743767,12.62326917881,1.6366586336825,1.92616169317078,0.734187008646726,0,0.65407546914134,0.659058548203415,0.58328969722285,0.419959264876088,0,40.2678254538567,64.5572306390096,43.3561000893779,0.514518872071894,1.14613375975503,1.03134418455488,5.05791152148994,6.87688273053643,7.60597684207415,0.338844532069132,0,1.7997994345628,2.96659908770092,3.5524005747305,1.79760066311043,0.384218305321555,1.55534418462716,2.02508907497536,1.47227472945967,315.073035797395,290.22126281042,1.95985278743926,1.72521847832825,0,556.085199046913,376.039210660878,439.468291646113,3.69281605644543,4.48289453651807,3.64639359389732,704.378706480484,160.95010646906,203.680064286488,161.45646483957,132.120919781568,28.519115211271,5.2251073399897,3.6274348851257,18.5513272769074,4.30211938490693,0.679971333707751,3.2382191498269,1.94932925234301,2.68816132258401,28.9315505471409,0.681721290312231,1.03914401841148,0.70667914902068,12.2533775205712,0,0,0,2.38140145112336,0.506719730950197,4.04419556011827,12.6744106488157,33.4029869904852,39.1887247131137,2.25530924795977,10.0473607843007,8.07154240396205,15.0722640552623,24.1056849628195,25.0076516746054,3.21353458054686,13.158541479712,7.96149496754887,2.91180329905337,12.5879665522424,17.9403843660032,14.9113408974498,159.858315168305,147.450481596672,9.19645398750929,4.19352935770721,6.59893004092748,6.98886248901856,633.764195321805,148.230195313235,2.01046963380583,100.122808430751,68.2760271071982,376.719724786482,223.243977981235,2.34230536855727,14.4312085907708,24.7668303265001,16.2040229032585,2.60240885925407,1.14951052216736,0.900310649026746,3.76762044589288,4.96666443804693,3.97152532883034,5.34099829990454,23.8007101079894,3.01795190105979,3.9712276835242,4.22282697993477,2.6303487891309,3.05851974148158,4.179025998266,4.32142486456681,2.9855140022774,4.21327912387941,5.1469581422943,3.9782889915383,1.65700618028402,1.87620847984877,0.900310307305074,4.49814997611899,4.72234156193769,4.47374627373397,6.51095045301142,6.70683503499048,6.18856314545998,9.54447129498187,8.70087559619205,11.3496333364198,10.0877991323479,9.22110484222413,8.32079796314305,87.9011984998052,3.80747065803352,4.29544417878937,6.08236303326152,2.34617075588757,1.85789337488351,4.63922860759536,5.24377164020691,6.89371935919098,2.66315876557583,6.16887780007865,4.28217282282428,7.28872105520782,7.56034593756373,10.1381325301942,9.88701349519644,6.70027954611552,9.16049856970089,1.70701110857774,3.65595240351132,4.50830942692322,3.46207257337034,5.23671715352589,5.19005067188357,9.16929788301731,11.513591542409,8.63493003127561,7.89741849099523,8.30067355844017,2.16898637430922,2.55526693647164,1.34917267430912,1.42002084971952,4.58236603529592,3.05551022137704,3.74004978686054,2.2698931748505,3.0201755450689,12.9391385874619,5.58211421502755,6.24075346229121,4.04126204715379,3.94674309748207,5.30687873499704,9.05290631816363,1.89491411770485,3.25929952884052,2.71592137240301,4.22442446919304,6.365237782789,4.04674189506223,4.48807390072937,5.04432461139811,4.87222317227305,6.37819074629948,9.99566219766002,9.15230403889247,8.10034728056465,6.03165135757089,2.17562273527484,9.83528546038072,9.3818493743609,1154.19819142224,886.120350637056,0.163934945376675,16.915552122693,11.6738041184015,15.2271110275689,19.1726823982191,9.79772071605463,9.13474563737816,9.05844898524264,21.8597778904443,26.0107713541068,18.1832377855401,31.1681676929153,7.52282451603824,3.02711526234334,2.28041743095006,9.89820737835213,7.96470830039777,3.64170954232472,3.93020624054176,6.22396763194464,5.02013217897314,5.84126781093462,8.78656196771952,7.27067458955011,5.34746067577082,12.6414703174326,8.4334886859999,9.28219889233682,11.5749465956288,2.52085531643834,4.01011919726539,3.42939256050548,5.32020700926821,6.95638388648075,9.54384319492302,8.52501857520878,3.28540391289194,4.2366414172764,17.8628002424519,4.61681508236144,3.87514624070173,3.92034012033013,3.34242563208782,4.76008609260678,11.0762717919343,1240.12441984629,11.4483490134561,3.50857675537478,5.18544676635193,11.3021074202815,14.3528939107076,16.0144721244566,9.00885678967433,9.93655311497972,8.7065983496787,14.3200592702267,2.37251995185852,3.65975040828328,4.32021363287205,4.80903080833278,5.24070152990826,6.47348862647139,7.3561575595549,6.28214260761671,7.38805347763219,18.6401793926078,1.69107881605257,4.03694674318743,3.64008679005615,2.52786544847262,1.29159823477731,3.54807863530634,4.92900402312167,6.77062801188541,9.75191903159111,7.00593950395418,6.33666013767304,101.755580842273,3.04087822935246,7.39518891586756,10.9133491301348,26.4959509587873,44.1072607614408,73.5596151062209,66.3125977013852,101.067416398096,90.1526522728648,133.39304293604,121.237603640252,121.419344150096,161.523878814928,10.6563280299149,1.77588762699252,1.52513556236109,1.17519231454855,11.9777548299958,3.00291960721891,6.41030684935428,6.64541975145104,17.0534515372024,26.5433366030021,26.2385384809091,22.3429250241365,23.2001796163978,63.0275918188991,62.6976934833451,62.1020700213261,76.1042833448933,71.5965006195043,83.8771705037948,0.830298780673413,2.79317411380722,2.90247129782028,4.132814190161,2.09613162627982,4.41224420280034,8.44537565646138,7.62329711783909,6.73930340142812,8.08631077644152,7.35089969681695,9.80856975207596,7.49132059759059,8.00314405060866,6.77738533676237,7.62069906052918,6.72129090480162,5.98018583437486,2.06042950401653,7.65434384698866,7.88599280486455,6.38912902173615,9.0605752179982,8.72078499793971,7.52875043322645,6.93839784711747,8.23175877927476,7.3659519202596,6.51859746460137,8.97827634652382,5.45721083371201,6.50129583678719,8.59385190656348,8.98633678878603,5.98010494041538,4.74640098082097,7.25187986180766,10.3138105943183,11.6685882561994,14.3384422427685,17.1582198359112
|phase1_expression=11.8510146857548,23.7303277194766,20.9299650119187,47.4868811751723,55.0985302940982,21.9921846204576,16.3528848416868,55.3939057564362,25.0603925429967,31.5987110534691,8.90333434772626,8.21653237651965,62.4882664248901,60.7571796812032,7.99463428357591,11.7435655086099,3.49780939064073,60.0955425007443,57.0396043799873,53.0487064747538,54.5977922769868,17.3759164601549,18.5451850288644,8.63959083084396,8.71755268055246,14.9300310669905,9.04600191934057,11.635446565038,4.94060890586572,4.28451220591882,4.6563407237614,19.0509202037889,10.4561013889377,31.6963362030877,14.1537293678125,4.82080471539628,19.3960888449251,12.9744805528441,9.37602413428561,11.5175223674236,11.1763982725893,10.2456822743767,12.62326917881,1.6366586336825,1.92616169317078,0.734187008646726,0,0.65407546914134,0.659058548203415,0.58328969722285,0.419959264876088,0,40.2678254538567,64.5572306390096,43.3561000893779,0.514518872071894,1.14613375975503,1.03134418455488,5.05791152148994,6.87688273053643,7.60597684207415,0.338844532069132,0,1.7997994345628,2.96659908770092,3.5524005747305,1.79760066311043,0.384218305321555,1.55534418462716,2.02508907497536,1.47227472945967,315.073035797395,290.22126281042,1.95985278743926,1.72521847832825,0,556.085199046913,376.039210660878,439.468291646113,3.69281605644543,4.48289453651807,3.64639359389732,704.378706480484,160.95010646906,203.680064286488,161.45646483957,132.120919781568,28.519115211271,5.2251073399897,3.6274348851257,18.5513272769074,4.30211938490693,0.679971333707751,3.2382191498269,1.94932925234301,2.68816132258401,28.9315505471409,0.681721290312231,1.03914401841148,0.70667914902068,12.2533775205712,0,0,0,2.38140145112336,0.506719730950197,4.04419556011827,12.6744106488157,33.4029869904852,39.1887247131137,2.25530924795977,10.0473607843007,8.07154240396205,15.0722640552623,24.1056849628195,25.0076516746054,3.21353458054686,13.158541479712,7.96149496754887,2.91180329905337,12.5879665522424,17.9403843660032,14.9113408974498,159.858315168305,147.450481596672,9.19645398750929,4.19352935770721,6.59893004092748,6.98886248901856,633.764195321805,148.230195313235,2.01046963380583,100.122808430751,68.2760271071982,376.719724786482,223.243977981235,2.34230536855727,14.4312085907708,24.7668303265001,16.2040229032585,2.60240885925407,1.14951052216736,0.900310649026746,3.76762044589288,4.96666443804693,3.97152532883034,5.34099829990454,23.8007101079894,3.01795190105979,3.9712276835242,4.22282697993477,2.6303487891309,3.05851974148158,4.179025998266,4.32142486456681,2.9855140022774,4.21327912387941,5.1469581422943,3.9782889915383,1.65700618028402,1.87620847984877,0.900310307305074,4.49814997611899,4.72234156193769,4.47374627373397,6.51095045301142,6.70683503499048,6.18856314545998,9.54447129498187,8.70087559619205,11.3496333364198,10.0877991323479,9.22110484222413,8.32079796314305,87.9011984998052,3.80747065803352,4.29544417878937,6.08236303326152,2.34617075588757,1.85789337488351,4.63922860759536,5.24377164020691,6.89371935919098,2.66315876557583,6.16887780007865,4.28217282282428,7.28872105520782,7.56034593756373,10.1381325301942,9.88701349519644,6.70027954611552,9.16049856970089,1.70701110857774,3.65595240351132,4.50830942692322,3.46207257337034,5.23671715352589,5.19005067188357,9.16929788301731,11.513591542409,8.63493003127561,7.89741849099523,8.30067355844017,2.16898637430922,2.55526693647164,1.34917267430912,1.42002084971952,4.58236603529592,3.05551022137704,3.74004978686054,2.2698931748505,3.0201755450689,12.9391385874619,5.58211421502755,6.24075346229121,4.04126204715379,3.94674309748207,5.30687873499704,9.05290631816363,1.89491411770485,3.25929952884052,2.71592137240301,4.22442446919304,6.365237782789,4.04674189506223,4.48807390072937,5.04432461139811,4.87222317227305,6.37819074629948,9.99566219766002,9.15230403889247,8.10034728056465,6.03165135757089,2.17562273527484,9.83528546038072,9.3818493743609,1154.19819142224,886.120350637056,0.163934945376675,16.915552122693,11.6738041184015,15.2271110275689,19.1726823982191,9.79772071605463,9.13474563737816,9.05844898524264,21.8597778904443,26.0107713541068,18.1832377855401,31.1681676929153,7.52282451603824,3.02711526234334,2.28041743095006,9.89820737835213,7.96470830039777,3.64170954232472,3.93020624054176,6.22396763194464,5.02013217897314,5.84126781093462,8.78656196771952,7.27067458955011,5.34746067577082,12.6414703174326,8.4334886859999,9.28219889233682,11.5749465956288,2.52085531643834,4.01011919726539,3.42939256050548,5.32020700926821,6.95638388648075,9.54384319492302,8.52501857520878,3.28540391289194,4.2366414172764,17.8628002424519,4.61681508236144,3.87514624070173,3.92034012033013,3.34242563208782,4.76008609260678,11.0762717919343,1240.12441984629,11.4483490134561,3.50857675537478,5.18544676635193,11.3021074202815,14.3528939107076,16.0144721244566,9.00885678967433,9.93655311497972,8.7065983496787,14.3200592702267,2.37251995185852,3.65975040828328,4.32021363287205,4.80903080833278,5.24070152990826,6.47348862647139,7.3561575595549,6.28214260761671,7.38805347763219,18.6401793926078,1.69107881605257,4.03694674318743,3.64008679005615,2.52786544847262,1.29159823477731,3.54807863530634,4.92900402312167,6.77062801188541,9.75191903159111,7.00593950395418,6.33666013767304,101.755580842273,3.04087822935246,7.39518891586756,10.9133491301348,26.4959509587873,44.1072607614408,73.5596151062209,66.3125977013852,101.067416398096,90.1526522728648,133.39304293604,121.237603640252,121.419344150096,161.523878814928,10.6563280299149,1.77588762699252,1.52513556236109,1.17519231454855,11.9777548299958,3.00291960721891,6.41030684935428,6.64541975145104,17.0534515372024,26.5433366030021,26.2385384809091,22.3429250241365,23.2001796163978,63.0275918188991,62.6976934833451,62.1020700213261,76.1042833448933,71.5965006195043,83.8771705037948,0.830298780673413,2.79317411380722,2.90247129782028,4.132814190161,2.09613162627982,4.41224420280034,8.44537565646138,7.62329711783909,6.73930340142812,8.08631077644152,7.35089969681695,9.80856975207596,7.49132059759059,8.00314405060866,6.77738533676237,7.62069906052918,6.72129090480162,5.98018583437486,2.06042950401653,7.65434384698866,7.88599280486455,6.38912902173615,9.0605752179982,8.72078499793971,7.52875043322645,6.93839784711747,8.23175877927476,7.3659519202596,6.51859746460137,8.97827634652382,5.45721083371201,6.50129583678719,8.59385190656348,8.98633678878603,5.98010494041538,4.74640098082097,7.25187986180766,10.3138105943183,11.6685882561994,14.3384422427685,17.1582198359112
|short_description=p1@Vamp1
|short_description=p1@Vamp1
}}
}}

Revision as of 17:26, 19 April 2012

Short description:p1@Vamp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vamp1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000063588, ENSMUST00000100942, NM_001080557, NM_009496, uc009dtx.1, uc009dty.1, uc009dtz.1_5end
EntrezGene:Vamp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vamp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I523.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I620.93
CD326+ enterocyte, pool1.CNhs13542.11848-124I347.49
CD326+ enterocyte, pool2.CNhs13197.11849-124I455.10
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I721.99
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I816.35
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E955.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E725.06
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F231.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.22
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E462.49
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E860.76
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.74
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A260.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A457.04
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A653.05
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A354.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H217.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I918.55
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.72
GP2+ M cell, pool1.CNhs13228.11845-124H914.93
GP2+ M cell, pool2.CNhs13231.11846-124I19.05
GP2+ M cell, pool3.CNhs13240.11847-124I211.64
Ileum epithelium, pool1.CNhs13199.10252-104B94.94
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I319.05
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G610.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.15
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F719.40
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H311.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A240.27
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I964.56
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A143.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1315.07
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5290.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3556.09
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3376.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7439.47
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4704.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5160.95
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6203.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6161.46
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6132.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E128.52
Mouse Schwann, donor1.CNhs12507.11728-123D95.23
Mouse Schwann, donor2.CNhs12573.11746-123F93.63
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.55
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A728.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.67
accessory axillary lymph node, adult.CNhs10475.1063-29H933.40
adrenal gland, adult.CNhs10508.49-24D739.19
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D610.05
adrenal gland, embryo E17.CNhs11043.1263-45I18.07
adrenal gland, embryo E18.CNhs11026.1262-18F515.07
adrenal gland, neonate N00.CNhs11191.1311-23C124.11
adrenal gland, neonate N25.CNhs11223.1377-27I325.01
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H113.16
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F52.91
bone (os femoris), neonate N16.CNhs11225.1525-43A612.59
bone (os femoris), neonate N20.CNhs11195.1350-25C317.94
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B2159.86
cerebellum, neonate N30.CNhs11135.1395-42I2147.45
colon, adult.CNhs10468.36-18H79.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.19
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.99
corpora quadrigemina, adult.CNhs10501.16-22A4633.76
corpus striatum, adult.CNhs10487.19-21D8148.23
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D5100.12
cortex, neonate N30.CNhs11107.1392-42F268.28
diencephalon, adult.CNhs10482.20-12F2376.72
diencephalon, neonate N30.CNhs11201.1388-42B2223.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.43
epididymis, adult.CNhs10490.58-23B224.77
eyeball, adult.CNhs10484.31-12G416.20
eyeball, embryo E12.CNhs11016.345-16C62.60
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C64.97
eyeball, neonate N01.CNhs11140.1532-43E73.97
eyeball, neonate N02.CNhs11205.1551-44G85.34
eyeball, neonate N16.CNhs11188.777-19A223.80
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H23.97
forelimb, embryo E13.CNhs10589.384-1E24.22
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.15
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C84.72
heart, embryo E16.CNhs11021.457-17C64.47
heart, embryo E17.CNhs11025.479-18E56.51
heart, embryo E18.CNhs11030.1283-20G36.71
heart, neonate N00.CNhs11213.639-21E36.19
heart, neonate N03.CNhs11221.1349-25I29.54
heart, neonate N10.CNhs11118.749-24G18.70
heart, neonate N16.CNhs11209.782-15G111.35
heart, neonate N20.CNhs11127.821-26I610.09
heart, neonate N25.CNhs11196.1351-25D39.22
heart, neonate N30.CNhs11202.1390-42D28.32
hippocampus, adult.CNhs10478.13-16E887.90
hippocampus, neonate N00.CNhs11228.627-43G13.81
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D84.64
intestine, embryo E16.CNhs10585.463-22H45.24
intestine, embryo E17.CNhs10582.482-18D36.89
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B87.29
intestine, neonate N07.CNhs11095.720-20F27.56
intestine, neonate N10.CNhs11098.755-23A510.14
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E36.70
intestine, neonate N30.CNhs11131.1384-42G19.16
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F83.66
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C75.24
kidney, neonate N00.CNhs11214.646-21G75.19
kidney, neonate N10.CNhs11206.758-6D59.17
kidney, neonate N20.CNhs11113.832-19I111.51
kidney, neonate N25.CNhs11122.1353-25F38.63
kidney, neonate N30.CNhs11203.1385-42H17.90
liver, adult pregnant day01.CNhs10466.508-5B28.30
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F54.58
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B19.05
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E55.04
lung, neonate N07.CNhs11111.715-19A34.87
lung, neonate N10.CNhs11219.750-23E66.38
lung, neonate N20.CNhs11109.822-18A410.00
lung, neonate N25.CNhs11119.1359-25C79.15
lung, neonate N30.CNhs11133.1394-42H28.10
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B69.84
mammary gland, adult pregnant day19.CNhs10476.588-5H29.38
medulla oblongata, adult.CNhs10477.17-12C21154.20
medulla oblongata, neonate N30.CNhs11200.1396-42A3886.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.92
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.23
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.80
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.06
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D526.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.18
olfactory brain, adult.CNhs10489.18-22I931.17
ovary, adult.CNhs10507.91-2I77.52
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G69.90
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E56.22
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G98.79
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B612.64
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G811.57
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C74.01
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F59.54
pituitary gland, neonate N00.CNhs11190.1308-22E98.53
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F817.86
skin, adult.CNhs10492.30-1C34.62
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H33.92
skin, neonate N06.CNhs11097.693-20I53.34
skin, neonate N10.CNhs11108.762-6C44.76
small intestine, neonate N16.CNhs11114.790-21I111.08
spinal cord, adult.CNhs10505.24-13C91240.12
spleen, adult.CNhs10465.25-2G211.45
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F25.19
spleen, neonate N10.CNhs11116.752-24D111.30
spleen, neonate N20.CNhs11112.824-19H114.35
spleen, neonate N25.CNhs11099.1354-25G316.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.71
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D44.32
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C65.24
stomach, neonate N03.CNhs11193.1340-24B86.47
stomach, neonate N07.CNhs11210.718-18A97.36
stomach, neonate N25.CNhs11104.1355-25E46.28
stomach, neonate N30.CNhs11134.1386-42I17.39
submandibular gland, adult.CNhs10469.59-29C118.64
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F54.04
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I46.77
testis, neonate N10.CNhs11204.763-44D99.75
testis, neonate N20.CNhs11110.839-18H37.01
testis, neonate N30.CNhs11130.1391-42E26.34
thymus, adult.CNhs10471.38-12B5101.76
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I27.40
thymus, embryo E16.CNhs11002.456-26C510.91
thymus, embryo E17.CNhs10581.478-18C126.50
thymus, embryo E18.CNhs10595.1273-19G444.11
thymus, neonate N02.CNhs11181.1541-43F873.56
thymus, neonate N03.CNhs11137.2104-43C766.31
thymus, neonate N06.CNhs11197.681-26C4101.07
thymus, neonate N07.CNhs11211.713-19D390.15
thymus, neonate N10.CNhs11194.748-24E4133.39
thymus, neonate N20.CNhs11186.820-7A2121.24
thymus, neonate N25.CNhs11125.1362-25G7121.42
thymus, neonate N30.CNhs11132.1393-42G2161.52
tongue, adult.CNhs10499.32-1B410.66
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E411.98
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D56.65
vesicular gland, adult.CNhs10491.51-27F817.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A126.54
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A226.24
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.34
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A463.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A562.70
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A662.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A776.10
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A871.60
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A983.88
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.81
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.72
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.06
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.72
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.50
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.99
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C210.31
whole body, neonate N01.CNhs10576.659-23C611.67
whole body, neonate N06.CNhs10515.692-21D114.34
whole body, neonate N10.CNhs10518.761-6B417.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:125165590..125165609,%2B&oldid=1097552"