Personal tools

User:Hisa: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 16: Line 16:
{{#ask:[[Category:FF Ontology]] [[Sample_species::Mouse (Mus musculus)]][[name::~*Total RNA*]]|?id|?Name|?sample_tissue|?sample_cell_line=|?sample_cell_type|?rna_sample_type|format=template|template=Datatable_sampledata|sep=,|limit=20}}
{{#ask:[[Category:FF Ontology]] [[Sample_species::Mouse (Mus musculus)]][[name::~*Total RNA*]]|?id|?Name|?sample_tissue|?sample_cell_line=|?sample_cell_type|?rna_sample_type|format=template|template=Datatable_sampledata|sep=,|limit=20}}


{{#ask:[[Category:FF Ontology]] [[Sample_species::Mouse (Mus musculus)]][[name::~*Mouse*]]|?id|?Name|?sample_tissue|?sample_cell_type|format=template|template=Datatable_sampledata|sep=,|limit=20}}


<html>
<script type="text/javascript" language="javascript" src="/resource_browser/rb_js/datatables/media/js/jquery.dataTables.js"></script>
<script type="text/javascript" charset="utf-8">
/* Data set - can contain whatever information you want */
var aDataSet =
[
</html>
{{#ask:[[Category:FF Ontology]] [[Sample_species::Mouse (Mus musculus)]][[name::~*Total RNA*]]|?id|?Name|?sample_tissue|?sample_cell_line=|?sample_cell_type|?rna_sample_type|format=template|template=Datatable_sampledata|sep=,|limit=20}}
<html>
];
$(document).ready(function() {
$('#dynamic').html( '<table cellpadding="0" cellspacing="0" border="0" class="display" id="example"></table>' );
$('#example').dataTable( {
"aaData": aDataSet,
"aoColumns": [
{ "sTitle": "FF sample ID",
              "fnRender": function(obj) {
                    var id = obj.aData[ obj.iDataColumn ];
                   
                        sReturn = "<a href=\"/resource_browser/"+id+"\">"+id+"</a>";
                   
                    return sReturn;
                }
},
{ "sTitle": "Name" },
]
} );
} );
</script>
<div id="dynamic"></div>
</html>




Revision as of 17:36, 2 May 2012

motif without matrices Swissregulon:SRY.p1 Swissregulon:HOX(A,B,D)3.p1

doubled top motif tables CNhs10855 & CNhs11062 CNhs11245 & CNhs11183 CNhs11248 & CNhs11185 CNhs11772 & CNhs12996 CNhs11781 & CNhs12997


 IdNameSample tissueSample cell lineSample cell typeRna sample type
10001-101A3FF:10001-101A3Clontech Mouse Universal Reference Total RNA, pool1whole bodyCELL MIXTURE - tissue sampletotal RNA
10003-101A7FF:10003-101A7SABiosciences XpressRef Mouse Universal Total RNA, pool1whole bodyCELL MIXTURE - tissue sampletotal RNA
10008-101B6FF:10008-101B6Universal RNA - Mouse Normal Tissues Biochain, pool1whole bodyCELL MIXTURE - tissue sampletotal RNA
10101-102D2FF:10101-102D2whole body, embryo E17.5, pool1 (internal control)whole bodyCELL MIXTURE - tissue sampletotal RNA
10101-102D3FF:10101-102D3whole body, embryo E17.5, pool1 (internal control)whole bodyCELL MIXTURE - tissue sampletotal RNA
10101-102D4FF:10101-102D4whole body, embryo E17.5, pool1 (internal control)whole bodyCELL MIXTURE - tissue sampletotal RNA
10114-102E6FF:10114-102E6cerebellumcerebellumCELL MIXTURE - tissue sample
10115-102E7FF:10115-102E7cerebellumcerebellumCELL MIXTURE - tissue sample
10116-102E8FF:10116-102E8cerebellumcerebellumCELL MIXTURE - tissue sample
10117-102E9FF:10117-102E9cerebellumcerebellumCELL MIXTURE - tissue sample
10118-102F1FF:10118-102F1cerebellumcerebellumCELL MIXTURE - tissue sample
10119-102F2FF:10119-102F2cerebellumcerebellumCELL MIXTURE - tissue sample
10120-102F3FF:10120-102F3cerebellumcerebellumCELL MIXTURE - tissue sample
10121-102F4FF:10121-102F4cerebellumcerebellumCELL MIXTURE - tissue sample
10122-102F5FF:10122-102F5cerebellumcerebellumCELL MIXTURE - tissue sample
10123-102F6FF:10123-102F6cerebellumcerebellumCELL MIXTURE - tissue sample
10124-102F7FF:10124-102F7cerebellumcerebellumCELL MIXTURE - tissue sample
10125-102F8FF:10125-102F8cerebellumcerebellumCELL MIXTURE - tissue sample
10126-102F9FF:10126-102F9cerebellumcerebellumCELL MIXTURE - tissue sample
10127-102G1FF:10127-102G1cerebellumcerebellumCELL MIXTURE - tissue sample
... further results

["FF:10001-101A3","Clontech Mouse Universal Reference Total RNA, pool1","whole body"],["FF:10003-101A7","SABiosciences XpressRef Mouse Universal Total RNA, pool1","whole body"]







pax8

link

PAX8



TF expression and enrichment
sampledata01data02
s110020
s3197
s43517
s2289999



CAGE Peaks (hg19)



    Sample of clicked point:


    sample

    		Mm9::chr4:32744082..32744141,+Mm9::chr4:32744082..32744141,+Mm9::chr4:32744159..32744169,+Mm9::chr4:32744159..32744169,+Mm9::chr4:32809978..32809991,+Mm9::chr4:32809978..32809991,+Mm9::chr4:32810017..32810026,+Mm9::chr4:32810017..32810026,+Mm9::chr4:32837666..32837670,+Mm9::chr4:32837666..32837670,+
    Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=User:Hisa&oldid=1695858"