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(Created page with "{{DOID |id=DOID:3904 |name=bronchogenic carcinoma |namespace= |def= |xref= |is_a=DOID:1325 |synonym="BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008];...")
 
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|id=DOID:3904
|id=DOID:3904
|name=bronchogenic carcinoma
|name=bronchogenic carcinoma
|namespace=
|namespace=disease_ontology
|def=
|def=
|xref=
|xref=MSH:D002283;;NCI:C35875;;SNOMEDCT_2010_1_31:154485001;;SNOMEDCT_2010_1_31:254622008;;SNOMEDCT_2010_1_31:269561006;;SNOMEDCT_2010_1_31:363493006;;UMLS_CUI:C0007121
|is_a=DOID:1325
|is_a=DOID:1325
|synonym="BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008];;"bronchial cancer" EXACT [CSP2005:2017-5516];;"Bronchiogenic carcinoma" EXACT [NCI2004_11_17:C35875];;"bronchogenic carcinoma" EXACT [CSP2005:2017-6052];;"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001];;"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006];;"cancer of bronchus" EXACT [SNOMEDCT_2005_07_31:363493006]
|synonym="BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008];;"bronchial cancer" EXACT [CSP2005:2017-5516];;"Bronchiogenic carcinoma" EXACT [NCI2004_11_17:C35875];;"bronchogenic carcinoma" EXACT [CSP2005:2017-6052];;"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001];;"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006];;"cancer of bronchus" EXACT [SNOMEDCT_2005_07_31:363493006]
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|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 14:00, 11 June 2012

Name:bronchogenic carcinoma
Namespace:disease_ontology
Xrefs:
links:

MSH:D002283
NCI:C35875
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:254622008
SNOMEDCT_2010_1_31:269561006
SNOMEDCT_2010_1_31:363493006

UMLS_CUI:C0007121
Synonyms: "BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008]
"bronchial cancer" EXACT [CSP2005:2017-5516]
"Bronchiogenic carcinoma" EXACT [NCI2004_11_17:C35875]
"bronchogenic carcinoma" EXACT [CSP2005:2017-6052]
"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"cancer of bronchus" EXACT [SNOMEDCT_2005_07_31:363493006]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1325(bronchus cancer)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3904 (bronchogenic carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.76e-57FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:125378873..125378876, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405332..45405343, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399245..45399258, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399533..45399540, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399294..45399301, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405393..45405412, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399263..45399274, +
4.76e-57FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:125378873..125378876, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405332..45405343, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399245..45399258, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399533..45399540, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405393..45405412, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399294..45399301, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399263..45399274, +
1.49e-38FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399422..45399430, +
1.49e-38FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_3efaffa271a7215afa8f9beebeea155ap@chr8:40525350..40525354, -
1.49e-38FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786620..73786627, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399724..45399733, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786593..73786601, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399422..45399430, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786620..73786627, +
1.49e-38FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_3efaffa271a7215afa8f9beebeea155ap@chr8:40525350..40525354, -
1.49e-38FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399724..45399733, +
1.49e-38FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786593..73786601, +
1.8e-38FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_a89e065dbffaa49eaeb69500b6779beep@chr18:10085554..10085562, +
1.8e-38FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_a89e065dbffaa49eaeb69500b6779beep@chr18:10085554..10085562, +
2.18e-38FFCP PHASE1:Hg19::chr2:233352641..233352675,+#_2f810072074677b83937c1f2a5e1735bp@chr2:233352641..233352675, +
2.18e-38FFCP PHASE2:Hg19::chr2:233352641..233352675,+#_2f810072074677b83937c1f2a5e1735bp@chr2:233352641..233352675, +
1.14e-32FFCP PHASE1:Hg19::chr14:106916169..106916203,+#_0f3f47edfc78ae20205a26a9a4185251p@chr14:106916169..106916203, +
1.14e-32FFCP PHASE2:Hg19::chr14:106916169..106916203,+#_0f3f47edfc78ae20205a26a9a4185251p@chr14:106916169..106916203, +
1.78e-29FFCP PHASE2:Hg19::chr2:192805223..192805230,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:192805223..192805230, +
1.78e-29FFCP PHASE2:Hg19::chr10:129703392..129703416,+#_39df5efeecaef77fad20cc2f4b578036p@chr10:129703392..129703416, +
1.78e-29FFCP PHASE1:Hg19::chr9:95426545..95426559,-#_39df5efeecaef77fad20cc2f4b578036p@chr9:95426545..95426559, -
1.78e-29FFCP PHASE1:Hg19::chr3:86703134..86703137,-#_39df5efeecaef77fad20cc2f4b578036p@chr3:86703134..86703137, -
1.78e-29FFCP PHASE1:Hg19::chr12:79756320..79756329,-#_39df5efeecaef77fad20cc2f4b578036p@chr12:79756320..79756329, -
1.78e-29FFCP PHASE1:Hg19::chr8:98108427..98108430,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98108427..98108430, -
1.78e-29FFCP PHASE1:Hg19::chr5:33650078..33650111,-#_39df5efeecaef77fad20cc2f4b578036p@chr5:33650078..33650111, -
1.78e-29FFCP PHASE2:Hg19::chr8:72275738..72275747,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:72275738..72275747, -
1.78e-29FFCP PHASE2:Hg19::chr8:116215608..116215615,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:116215608..116215615, +
1.78e-29FFCP PHASE2:Hg19::chr2:222160756..222160761,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:222160756..222160761, +
1.78e-29FFCP PHASE2:Hg19::chr18:10085817..10085825,+#_39df5efeecaef77fad20cc2f4b578036p@chr18:10085817..10085825, +
1.78e-29FFCP PHASE2:Hg19::chr14:59113338..59113345,+#_39df5efeecaef77fad20cc2f4b578036p@chr14:59113338..59113345, +
1.78e-29FFCP PHASE1:Hg19::chr2:194837773..194837784,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:194837773..194837784, -
1.78e-29FFCP PHASE1:Hg19::chr14:57127818..57127825,+#_39df5efeecaef77fad20cc2f4b578036p@chr14:57127818..57127825, +
1.78e-29FFCP PHASE1:Hg19::chrX:69542573..69542578,+#_39df5efeecaef77fad20cc2f4b578036p@chrX:69542573..69542578, +
1.78e-29FFCP PHASE2:Hg19::chr8:98066259..98066270,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98066259..98066270, -
1.78e-29FFCP PHASE2:Hg19::chr6:154858693..154858698,+#_39df5efeecaef77fad20cc2f4b578036p@chr6:154858693..154858698, +
1.78e-29FFCP PHASE2:Hg19::chr1:144618112..144618116,+#_39df5efeecaef77fad20cc2f4b578036p4@NBPF8
1.78e-29FFCP PHASE1:Hg19::chr8:121815999..121816003,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:121815999..121816003, -
1.78e-29FFCP PHASE1:Hg19::chr2:97626442..97626445,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:97626442..97626445, -
1.78e-29FFCP PHASE1:Hg19::chr3:78360522..78360543,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:78360522..78360543, +
1.78e-29FFCP PHASE1:Hg19::chr2:135170047..135170048,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:135170047..135170048, +
1.78e-29FFCP PHASE2:Hg19::chr9:125306070..125306106,+#_39df5efeecaef77fad20cc2f4b578036p@chr9:125306070..125306106, +
1.78e-29FFCP PHASE2:Hg19::chr17:13574618..13574636,-#_39df5efeecaef77fad20cc2f4b578036p@chr17:13574618..13574636, -
1.78e-29FFCP PHASE1:Hg19::chr8:98051049..98051058,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98051049..98051058, -
1.78e-29FFCP PHASE1:Hg19::chr16:66088105..66088108,-#_39df5efeecaef77fad20cc2f4b578036p@chr16:66088105..66088108, -
1.78e-29FFCP PHASE2:Hg19::chr2:220594730..220594748,+#_39df5efeecaef77fad20cc2f4b578036p2@ENST00000442416
1.78e-29FFCP PHASE2:Hg19::chr10:36850273..36850276,-#_39df5efeecaef77fad20cc2f4b578036p@chr10:36850273..36850276, -
1.78e-29FFCP PHASE1:Hg19::chr4:81460545..81460547,-#_39df5efeecaef77fad20cc2f4b578036p@chr4:81460545..81460547, -
1.78e-29FFCP PHASE1:Hg19::chr10:29213480..29213487,-#_39df5efeecaef77fad20cc2f4b578036p@chr10:29213480..29213487, -
1.78e-29FFCP PHASE2:Hg19::chr4:169849979..169849990,-#_39df5efeecaef77fad20cc2f4b578036p@chr4:169849979..169849990, -
1.78e-29FFCP PHASE1:Hg19::chr13:104517168..104517170,+#_39df5efeecaef77fad20cc2f4b578036p@chr13:104517168..104517170, +
1.78e-29FFCP PHASE1:Hg19::chr8:54464033..54464036,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:54464033..54464036, -
1.78e-29FFCP PHASE1:Hg19::chr3:1991867..1991875,-#_39df5efeecaef77fad20cc2f4b578036p@chr3:1991867..1991875, -
1.78e-29FFCP PHASE1:Hg19::chr2:68113370..68113379,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:68113370..68113379, -
1.78e-29FFCP PHASE1:Hg19::chr20:2779313..2779314,-#_39df5efeecaef77fad20cc2f4b578036p16@CPXM1
1.78e-29FFCP PHASE1:Hg19::chr1:181360920..181360925,+#_39df5efeecaef77fad20cc2f4b578036p@chr1:181360920..181360925, +
1.78e-29FFCP PHASE2:Hg19::chr8:97965705..97965721,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:97965705..97965721, -
1.78e-29FFCP PHASE1:Hg19::chr8:116215298..116215305,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:116215298..116215305, +
1.78e-29FFCP PHASE1:Hg19::chr2:222127471..222127478,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:222127471..222127478, -
1.78e-29FFCP PHASE1:Hg19::chr18:10085799..10085809,+#_39df5efeecaef77fad20cc2f4b578036p@chr18:10085799..10085809, +
1.78e-29FFCP PHASE1:Hg19::chr14:60194043..60194066,-#_39df5efeecaef77fad20cc2f4b578036p18@RTN1
1.78e-29FFCP PHASE2:Hg19::chr4:6324309..6324314,-#_39df5efeecaef77fad20cc2f4b578036p43@PPP2R2C
1.78e-29FFCP PHASE1:Hg19::chr13:76554315..76554319,+#_39df5efeecaef77fad20cc2f4b578036p@chr13:76554315..76554319, +
1.78e-29FFCP PHASE2:Hg19::chr18:6928495..6928520,-#_39df5efeecaef77fad20cc2f4b578036p2@LOC400643
1.78e-29FFCP PHASE2:Hg19::chr12:84664662..84664670,+#_39df5efeecaef77fad20cc2f4b578036p3@ENST00000547882
1.78e-29FFCP PHASE2:Hg19::chr10:115999570..115999575,+#_39df5efeecaef77fad20cc2f4b578036p9@VWA2
1.78e-29FFCP PHASE2:Hg19::chr3:150914094..150914095,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:150914094..150914095, +
1.78e-29FFCP PHASE2:Hg19::chr11:42142040..42142055,+#_39df5efeecaef77fad20cc2f4b578036p@chr11:42142040..42142055, +
1.78e-29FFCP PHASE1:Hg19::chr8:97962018..97962029,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:97962018..97962029, -
1.78e-29FFCP PHASE1:Hg19::chr3:102635409..102635414,-#_39df5efeecaef77fad20cc2f4b578036p@chr3:102635409..102635414, -
1.78e-29FFCP PHASE1:Hg19::chr2:23850233..23850248,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:23850233..23850248, +
1.78e-29FFCP PHASE2:Hg19::chrX:48056224..48056233,-#_39df5efeecaef77fad20cc2f4b578036p1@SSX5
1.78e-29FFCP PHASE2:Hg19::chr7:95766200..95766209,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:95766200..95766209, -
1.78e-29FFCP PHASE2:Hg19::chr14:57127856..57127863,+#_39df5efeecaef77fad20cc2f4b578036p@chr14:57127856..57127863, +
1.78e-29FFCP PHASE1:Hg19::chr7:79840127..79840130,+#_39df5efeecaef77fad20cc2f4b578036p@chr7:79840127..79840130, +
1.78e-29FFCP PHASE2:Hg19::chr4:157516018..157516023,+#_39df5efeecaef77fad20cc2f4b578036p@chr4:157516018..157516023, +
1.78e-29FFCP PHASE1:Hg19::chr8:38459926..38459928,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:38459926..38459928, +
1.78e-29FFCP PHASE1:Hg19::chr15:89655929..89655934,+#_39df5efeecaef77fad20cc2f4b578036p@chr15:89655929..89655934, +
1.78e-29FFCP PHASE2:Hg19::chr2:234862417..234862434,+#_39df5efeecaef77fad20cc2f4b578036p6@TRPM8
1.78e-29FFCP PHASE2:Hg19::chr14:60958049..60958051,-#_39df5efeecaef77fad20cc2f4b578036p@chr14:60958049..60958051, -
1.78e-29FFCP PHASE2:Hg19::chr11:86502231..86502240,-#_39df5efeecaef77fad20cc2f4b578036p@chr11:86502231..86502240, -
1.78e-29FFCP PHASE1:Hg19::chr2:220594700..220594702,+#_39df5efeecaef77fad20cc2f4b578036p6@ENST00000442416
1.78e-29FFCP PHASE1:Hg19::chr2:103235211..103235247,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:103235211..103235247, +
1.78e-29FFCP PHASE1:Hg19::chr14:58415850..58415853,-#_39df5efeecaef77fad20cc2f4b578036p@chr14:58415850..58415853, -
1.78e-29FFCP PHASE2:Hg19::chr6:998897..998898,-#_39df5efeecaef77fad20cc2f4b578036p@chr6:998897..998898, -
1.78e-29FFCP PHASE2:Hg19::chr4:3838289..3838308,-#_39df5efeecaef77fad20cc2f4b578036p@chr4:3838289..3838308, -
1.78e-29FFCP PHASE2:Hg19::chr12:79756320..79756329,-#_39df5efeecaef77fad20cc2f4b578036p@chr12:79756320..79756329, -
1.78e-29FFCP PHASE1:Hg19::chr9:226208..226216,-#_39df5efeecaef77fad20cc2f4b578036p@chr9:226208..226216, -
1.78e-29FFCP PHASE1:Hg19::chr7:26482715..26482738,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:26482715..26482738, -

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