UBERON:0002372: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0002372
|name=tonsil
|namespace=
|def="Portion of lymphoid tissue on either side of the throat." [Wikipedia:Tonsil]
|xref=BTO:0001387;;EFO:0001401;;EV...") |
No edit summary |
||
| Line 21: | Line 21: | ||
|part_of=UBERON:0000166;;UBERON:0001735 | |part_of=UBERON:0000166;;UBERON:0001735 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 17:16, 15 June 2012
| Name: | tonsil | |
|---|---|---|
| Definition: | "Portion of lymphoid tissue on either side of the throat." [Wikipedia:Tonsil] | |
| Xrefs: |
| |
| Synonyms: | "Mandel" RELATED [BTO:0001387] | |
| Comments: | Most commonly, the term "tonsils" refers to the palatine tonsils that can be seen in the back of the throat. | |
| Alt_id: | UBERON:FMA_9609-MA_0000143 | |
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000078(mixed ectoderm/mesoderm/endoderm-derived structure),UBERON:0001744(lymphoid tissue) |
|---|---|
| part_of: | UBERON:0000166(oral opening),UBERON:0001735(tonsillar ring) |
Children
| derives from: | FF:0010047 (human tonsil - adult sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10047-101G2 (tonsil, adult, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002372 (tonsil), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
