UBERON:0008001: Difference between revisions
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|id=UBERON:0008001
|name=irregular bone
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|def="The irregular bones are bones which, from their peculiar form, cannot be grouped as long bone, short bon...") |
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Revision as of 17:25, 15 June 2012
| Name: | irregular bone | ||
|---|---|---|---|
| Definition: | "The irregular bones are bones which, from their peculiar form, cannot be grouped as long bone, short bone, flat bone or sesamoid bone. Irregular bones serve various purposes in the body, such as protection of nervous tissue, affording multiple anchor points for skeletal muscle attachment (as with the sacrum), and maintaining pharynx and trachea support, and tongue attachment (such as the hyoid bone). They consist of cancellous tissue enclosed within a thin layer of compact bone. The irregular bones are: the vertebrC&, sacrum, coccyx, temporal, sphenoid, ethmoid, zygomatic, maxilla, mandible, palatine, inferior nasal concha, and hyoid." [Wikipedia:Irregular_bone] | ||
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Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001474(bone element) |
|---|
Children
| is a: | UBERON:0002412 (vertebra),UBERON:0008193 (pneumatized bone) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 11219-116B4 (Mesenchymal Stem Cells - Vertebral, donor1)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Mouse (Mus musculus)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 11219-116B4 (Mesenchymal Stem Cells - Vertebral, donor1)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0008001 (irregular bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_3d0aa204525e357a304db252601cb34c | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_3d0aa204525e357a304db252601cb34c | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_c4ba0b9b9d1cb23016106544f787e391 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_c4ba0b9b9d1cb23016106544f787e391 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_c4ba0b9b9d1cb23016106544f787e391 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_c4ba0b9b9d1cb23016106544f787e391 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_c4ba0b9b9d1cb23016106544f787e391 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_c4ba0b9b9d1cb23016106544f787e391 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_c4ba0b9b9d1cb23016106544f787e391 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_c4ba0b9b9d1cb23016106544f787e391 | p@chr8:57353655..57353662, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_18faca4318141a76df481e738d52a615 | p3@Gipc3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_18faca4318141a76df481e738d52a615 | p4@Gipc3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_18faca4318141a76df481e738d52a615 | p2@Tmprss3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_18faca4318141a76df481e738d52a615 | p@chr2:75320183..75320189, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_18faca4318141a76df481e738d52a615 | p@chr17:13983179..13983190, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_18faca4318141a76df481e738d52a615 | p@chr6:86746562..86746579, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_18faca4318141a76df481e738d52a615 | p5@Fer1l6 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_18faca4318141a76df481e738d52a615 | p7@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_18faca4318141a76df481e738d52a615 | p2@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_18faca4318141a76df481e738d52a615 | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_18faca4318141a76df481e738d52a615 | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_18faca4318141a76df481e738d52a615 | p3@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_18faca4318141a76df481e738d52a615 | p@chr7:139597684..139597691, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_18faca4318141a76df481e738d52a615 | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_18faca4318141a76df481e738d52a615 | p@chr5:72652660..72652667, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_18faca4318141a76df481e738d52a615 | p@chr11:89702580..89702593, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_18faca4318141a76df481e738d52a615 | p@chr16:93971367..93971379, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_18faca4318141a76df481e738d52a615 | p6@Jag1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_18faca4318141a76df481e738d52a615 | p1@Otog |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_18faca4318141a76df481e738d52a615 | p13@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_18faca4318141a76df481e738d52a615 | p4@BC030867 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_18faca4318141a76df481e738d52a615 | p@chr11:114603036..114603048, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_18faca4318141a76df481e738d52a615 | p@chr16:93971325..93971337, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_18faca4318141a76df481e738d52a615 | p@chr15:89215333..89215341, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_18faca4318141a76df481e738d52a615 | p7@Glt25d2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_18faca4318141a76df481e738d52a615 | p@chr1:172843813..172843834, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_18faca4318141a76df481e738d52a615 | p6@Fam70b |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_18faca4318141a76df481e738d52a615 | p2@Strc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_18faca4318141a76df481e738d52a615 | p9@Ankrd24 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_18faca4318141a76df481e738d52a615 | p3@Tmprss3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_18faca4318141a76df481e738d52a615 | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_18faca4318141a76df481e738d52a615 | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_18faca4318141a76df481e738d52a615 | p1@Otog |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_18faca4318141a76df481e738d52a615 | p@chr5:3909310..3909321, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_18faca4318141a76df481e738d52a615 | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_18faca4318141a76df481e738d52a615 | p@chr3:154459231..154459240, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_18faca4318141a76df481e738d52a615 | p@chr11:75421384..75421397, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_18faca4318141a76df481e738d52a615 | p7@Glt25d2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_18faca4318141a76df481e738d52a615 | p@chr7:141605556..141605563, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_18faca4318141a76df481e738d52a615 | p@chr1:194818647..194818660, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_18faca4318141a76df481e738d52a615 | p13@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_18faca4318141a76df481e738d52a615 | p6@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_18faca4318141a76df481e738d52a615 | p2@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_18faca4318141a76df481e738d52a615 | p5@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_18faca4318141a76df481e738d52a615 | p3@Fanca |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_18faca4318141a76df481e738d52a615 | p3@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_18faca4318141a76df481e738d52a615 | p@chr10:108316802..108316807, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_18faca4318141a76df481e738d52a615 | p@chr1:172843847..172843880, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_18faca4318141a76df481e738d52a615 | p2@Gpr152 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_18faca4318141a76df481e738d52a615 | p@chr17:13983179..13983190, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_18faca4318141a76df481e738d52a615 | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_18faca4318141a76df481e738d52a615 | p@chr9:42206784..42206793, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_18faca4318141a76df481e738d52a615 | p2@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_18faca4318141a76df481e738d52a615 | p2@Slc26a5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_18faca4318141a76df481e738d52a615 | p@chr13:43699188..43699216, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_18faca4318141a76df481e738d52a615 | p2@Fscn2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_18faca4318141a76df481e738d52a615 | p1@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_18faca4318141a76df481e738d52a615 | p4@BC030867 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_18faca4318141a76df481e738d52a615 | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_18faca4318141a76df481e738d52a615 | p@chr3:81012915..81012923, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_18faca4318141a76df481e738d52a615 | p4@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_18faca4318141a76df481e738d52a615 | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_18faca4318141a76df481e738d52a615 | p@chr1:93235228..93235249, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_18faca4318141a76df481e738d52a615 | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_18faca4318141a76df481e738d52a615 | p@chr14:47293496..47293510, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_18faca4318141a76df481e738d52a615 | p@chr6:29428397..29428407, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_18faca4318141a76df481e738d52a615 | p1@Espnl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_18faca4318141a76df481e738d52a615 | p3@Epyc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_18faca4318141a76df481e738d52a615 | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_18faca4318141a76df481e738d52a615 | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_18faca4318141a76df481e738d52a615 | p@chr1:16651649..16651655, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_18faca4318141a76df481e738d52a615 | p7@Pkn3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_18faca4318141a76df481e738d52a615 | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_18faca4318141a76df481e738d52a615 | p@chr1:16651649..16651655, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_18faca4318141a76df481e738d52a615 | p@chr18:42158627..42158630, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_18faca4318141a76df481e738d52a615 | p@chr8:13414266..13414279, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_18faca4318141a76df481e738d52a615 | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_18faca4318141a76df481e738d52a615 | p@chr1:60561636..60561645, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_18faca4318141a76df481e738d52a615 | p@chr14:102297728..102297742, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_18faca4318141a76df481e738d52a615 | p@chr11:8405038..8405048, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_18faca4318141a76df481e738d52a615 | p@chr8:13425469..13425503, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_18faca4318141a76df481e738d52a615 | p@chr15:65641779..65641790, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_18faca4318141a76df481e738d52a615 | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_18faca4318141a76df481e738d52a615 | p4@Chrna10 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_18faca4318141a76df481e738d52a615 | p@chr11:75421384..75421397, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_18faca4318141a76df481e738d52a615 | p1@Tmc1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_18faca4318141a76df481e738d52a615 | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_18faca4318141a76df481e738d52a615 | p4@Gipc3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_18faca4318141a76df481e738d52a615 | p3@Tmprss3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_18faca4318141a76df481e738d52a615 | p2@Tecta |
