Personal tools

CL:0005014: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{CL |id=CL:0005014 |name=auditory epithelial support cell |namespace=cell |def="A non-sensory cell that extends from the basement membrane to the apical surface of the au...")
 
No edit summary
Line 20: Line 20:
|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 17:42, 15 June 2012

Name:auditory epithelial support cell
Namespace:cell
Definition:"A non-sensory cell that extends from the basement membrane to the apical surface of the auditory epithelium and provides support for auditory hair cells." [CL:CVS, GOC:tfm]


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000630(supportive cell),CL:0000710(neurecto-epithelial cell),CL:0002491(auditory epithelial cell)



Children


is a:CL:0002315 (supporting cell of cochlea)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0005014 (auditory epithelial support cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr7:128226917..128226918,+#_54f00467cd82acee79d43bd2926a04e3p2@Otoa
3.07e-86FFCP PHASE1:Mm9::chr14:102291551..102291553,-#_54f00467cd82acee79d43bd2926a04e3p@chr14:102291551..102291553, -
3.07e-86FFCP PHASE2:Mm9::chr19:23001562..23001563,+#_54f00467cd82acee79d43bd2926a04e3p@chr19:23001562..23001563, +
3.07e-86FFCP PHASE2:Mm9::chr19:55269566..55269577,-#_54f00467cd82acee79d43bd2926a04e3p@chr19:55269566..55269577, -
3.07e-86FFCP PHASE1:Mm9::chr9:77109306..77109314,-#_54f00467cd82acee79d43bd2926a04e3p@chr9:77109306..77109314, -
3.07e-86FFCP PHASE1:Mm9::chr10:107349495..107349500,-#_54f00467cd82acee79d43bd2926a04e3p6@Otogl
3.07e-86FFCP PHASE2:Mm9::chr6:30619311..30619322,-#_54f00467cd82acee79d43bd2926a04e3p16@Tsga14
3.07e-86FFCP PHASE1:Mm9::chr6:30620092..30620097,+#_54f00467cd82acee79d43bd2926a04e3p@chr6:30620092..30620097, +
3.07e-86FFCP PHASE1:Mm9::chr4:151450310..151450318,+#_54f00467cd82acee79d43bd2926a04e3p@chr4:151450310..151450318, +
3.07e-86FFCP PHASE1:Mm9::chr9:42147036..42147053,-#_54f00467cd82acee79d43bd2926a04e3p@chr9:42147036..42147053, -
3.07e-86FFCP PHASE1:Mm9::chr15:94418486..94418491,-#_54f00467cd82acee79d43bd2926a04e3p@chr15:94418486..94418491, -
3.07e-86FFCP PHASE1:Mm9::chr5:113939919..113939925,+#_54f00467cd82acee79d43bd2926a04e3p@chr5:113939919..113939925, +
3.07e-86FFCP PHASE1:Mm9::chr14:62578740..62578749,+#_54f00467cd82acee79d43bd2926a04e3p@chr14:62578740..62578749, +
3.07e-86FFCP PHASE2:Mm9::chr5:92800735..92800736,+#_54f00467cd82acee79d43bd2926a04e3p@chr5:92800735..92800736, +
3.07e-86FFCP PHASE2:Mm9::chr17:34752992..34753001,-#_54f00467cd82acee79d43bd2926a04e3p5@Egfl8
3.07e-86FFCP PHASE1:Mm9::chr6:30619311..30619322,-#_54f00467cd82acee79d43bd2926a04e3p16@Tsga14
3.07e-86FFCP PHASE2:Mm9::chr10:97109619..97109632,+#_54f00467cd82acee79d43bd2926a04e3p5@Epyc
3.07e-86FFCP PHASE2:Mm9::chr14:102291443..102291451,-#_54f00467cd82acee79d43bd2926a04e3p@chr14:102291443..102291451, -
3.07e-86FFCP PHASE2:Mm9::chr7:128226917..128226918,+#_54f00467cd82acee79d43bd2926a04e3p2@Otoa
3.07e-86FFCP PHASE2:Mm9::chr19:55270369..55270394,+#_54f00467cd82acee79d43bd2926a04e3p@chr19:55270369..55270394, +
3.07e-86FFCP PHASE1:Mm9::chr10:97109619..97109632,+#_54f00467cd82acee79d43bd2926a04e3p5@Epyc
3.07e-86FFCP PHASE1:Mm9::chr9:42207838..42207847,-#_54f00467cd82acee79d43bd2926a04e3p14@Tecta
3.07e-86FFCP PHASE1:Mm9::chr4:151450365..151450374,+#_54f00467cd82acee79d43bd2926a04e3p@chr4:151450365..151450374, +
3.07e-86FFCP PHASE1:Mm9::chr9:42202683..42202684,-#_54f00467cd82acee79d43bd2926a04e3p@chr9:42202683..42202684, -
3.07e-86FFCP PHASE2:Mm9::chr4:151450310..151450318,+#_54f00467cd82acee79d43bd2926a04e3p@chr4:151450310..151450318, +
3.07e-86FFCP PHASE1:Mm9::chr15:94418515..94418518,-#_54f00467cd82acee79d43bd2926a04e3p@chr15:94418515..94418518, -
3.07e-86FFCP PHASE1:Mm9::chr10:67372807..67372809,+#_54f00467cd82acee79d43bd2926a04e3p@chr10:67372807..67372809, +
3.07e-86FFCP PHASE2:Mm9::chr9:42139059..42139081,-#_54f00467cd82acee79d43bd2926a04e3p@chr9:42139059..42139081, -
3.07e-86FFCP PHASE2:Mm9::chr7:59135658..59135665,+#_54f00467cd82acee79d43bd2926a04e3p22@Gas2
3.07e-86FFCP PHASE2:Mm9::chr10:67372807..67372809,+#_54f00467cd82acee79d43bd2926a04e3p@chr10:67372807..67372809, +
3.07e-86FFCP PHASE2:Mm9::chr15:94418486..94418491,-#_54f00467cd82acee79d43bd2926a04e3p@chr15:94418486..94418491, -
3.07e-86FFCP PHASE2:Mm9::chr11:119881548..119881551,-#_54f00467cd82acee79d43bd2926a04e3p19@Aatk
3.07e-86FFCP PHASE2:Mm9::chr5:113939859..113939865,+#_54f00467cd82acee79d43bd2926a04e3p@chr5:113939859..113939865, +
3.07e-86FFCP PHASE1:Mm9::chr7:59135658..59135665,+#_54f00467cd82acee79d43bd2926a04e3p22@Gas2
3.07e-86FFCP PHASE1:Mm9::chr5:92800684..92800687,+#_54f00467cd82acee79d43bd2926a04e3p@chr5:92800684..92800687, +
3.07e-86FFCP PHASE1:Mm9::chr19:23001562..23001563,+#_54f00467cd82acee79d43bd2926a04e3p@chr19:23001562..23001563, +
3.07e-86FFCP PHASE2:Mm9::chr9:77109269..77109270,-#_54f00467cd82acee79d43bd2926a04e3p@chr9:77109269..77109270, -
3.07e-86FFCP PHASE2:Mm9::chr2:163517841..163517844,-#_54f00467cd82acee79d43bd2926a04e3p1@ENSMUST00000154065
3.07e-86FFCP PHASE1:Mm9::chr14:102291443..102291451,-#_54f00467cd82acee79d43bd2926a04e3p@chr14:102291443..102291451, -
3.07e-86FFCP PHASE2:Mm9::chr4:151450365..151450374,+#_54f00467cd82acee79d43bd2926a04e3p@chr4:151450365..151450374, +
3.07e-86FFCP PHASE1:Mm9::chr17:34752992..34753001,-#_54f00467cd82acee79d43bd2926a04e3p5@Egfl8
3.07e-86FFCP PHASE2:Mm9::chr9:42147036..42147053,-#_54f00467cd82acee79d43bd2926a04e3p@chr9:42147036..42147053, -
3.07e-86FFCP PHASE1:Mm9::chr14:48406009..48406013,+#_54f00467cd82acee79d43bd2926a04e3p@chr14:48406009..48406013, +
3.07e-86FFCP PHASE2:Mm9::chr14:102298599..102298602,+#_54f00467cd82acee79d43bd2926a04e3p@chr14:102298599..102298602, +
3.07e-86FFCP PHASE1:Mm9::chr15:55289275..55289297,+#_54f00467cd82acee79d43bd2926a04e3p@chr15:55289275..55289297, +
3.07e-86FFCP PHASE2:Mm9::chr15:55289275..55289297,+#_54f00467cd82acee79d43bd2926a04e3p@chr15:55289275..55289297, +
3.07e-86FFCP PHASE2:Mm9::chr15:94418515..94418518,-#_54f00467cd82acee79d43bd2926a04e3p@chr15:94418515..94418518, -
3.07e-86FFCP PHASE2:Mm9::chr14:102291551..102291553,-#_54f00467cd82acee79d43bd2926a04e3p@chr14:102291551..102291553, -
3.07e-86FFCP PHASE1:Mm9::chr19:55269566..55269577,-#_54f00467cd82acee79d43bd2926a04e3p@chr19:55269566..55269577, -
3.07e-86FFCP PHASE2:Mm9::chr5:113939919..113939925,+#_54f00467cd82acee79d43bd2926a04e3p@chr5:113939919..113939925, +
3.07e-86FFCP PHASE2:Mm9::chr14:62578740..62578749,+#_54f00467cd82acee79d43bd2926a04e3p@chr14:62578740..62578749, +
3.07e-86FFCP PHASE2:Mm9::chr14:119912363..119912365,+#_54f00467cd82acee79d43bd2926a04e3p@chr14:119912363..119912365, +
3.07e-86FFCP PHASE2:Mm9::chr10:24310748..24310749,+#_54f00467cd82acee79d43bd2926a04e3p@chr10:24310748..24310749, +
3.07e-86FFCP PHASE1:Mm9::chr5:92800735..92800736,+#_54f00467cd82acee79d43bd2926a04e3p@chr5:92800735..92800736, +
3.07e-86FFCP PHASE2:Mm9::chr14:48406009..48406013,+#_54f00467cd82acee79d43bd2926a04e3p@chr14:48406009..48406013, +
3.07e-86FFCP PHASE2:Mm9::chr9:77109306..77109314,-#_54f00467cd82acee79d43bd2926a04e3p@chr9:77109306..77109314, -
3.07e-86FFCP PHASE1:Mm9::chr14:102298599..102298602,+#_54f00467cd82acee79d43bd2926a04e3p@chr14:102298599..102298602, +
3.07e-86FFCP PHASE2:Mm9::chr6:30619458..30619461,-#_54f00467cd82acee79d43bd2926a04e3p17@Tsga14
3.07e-86FFCP PHASE2:Mm9::chr9:42207838..42207847,-#_54f00467cd82acee79d43bd2926a04e3p14@Tecta
3.07e-86FFCP PHASE1:Mm9::chr11:119881548..119881551,-#_54f00467cd82acee79d43bd2926a04e3p19@Aatk
3.07e-86FFCP PHASE2:Mm9::chr9:42202683..42202684,-#_54f00467cd82acee79d43bd2926a04e3p@chr9:42202683..42202684, -
3.07e-86FFCP PHASE1:Mm9::chr14:119912363..119912365,+#_54f00467cd82acee79d43bd2926a04e3p@chr14:119912363..119912365, +
3.07e-86FFCP PHASE1:Mm9::chr10:24310748..24310749,+#_54f00467cd82acee79d43bd2926a04e3p@chr10:24310748..24310749, +
3.07e-86FFCP PHASE2:Mm9::chr10:97112452..97112459,+#_54f00467cd82acee79d43bd2926a04e3p@chr10:97112452..97112459, +
3.07e-86FFCP PHASE1:Mm9::chr9:77109269..77109270,-#_54f00467cd82acee79d43bd2926a04e3p@chr9:77109269..77109270, -
3.07e-86FFCP PHASE1:Mm9::chr6:30619458..30619461,-#_54f00467cd82acee79d43bd2926a04e3p17@Tsga14
3.07e-86FFCP PHASE1:Mm9::chr9:42139059..42139081,-#_54f00467cd82acee79d43bd2926a04e3p@chr9:42139059..42139081, -
3.07e-86FFCP PHASE1:Mm9::chr19:55270369..55270394,+#_54f00467cd82acee79d43bd2926a04e3p@chr19:55270369..55270394, +
3.07e-86FFCP PHASE1:Mm9::chr5:113939859..113939865,+#_54f00467cd82acee79d43bd2926a04e3p@chr5:113939859..113939865, +
3.07e-86FFCP PHASE1:Mm9::chr2:163517841..163517844,-#_54f00467cd82acee79d43bd2926a04e3p1@ENSMUST00000154065
3.07e-86FFCP PHASE2:Mm9::chr5:92800684..92800687,+#_54f00467cd82acee79d43bd2926a04e3p@chr5:92800684..92800687, +
3.07e-86FFCP PHASE2:Mm9::chr10:107349495..107349500,-#_54f00467cd82acee79d43bd2926a04e3p6@Otogl
3.07e-86FFCP PHASE1:Mm9::chr10:97112452..97112459,+#_54f00467cd82acee79d43bd2926a04e3p@chr10:97112452..97112459, +
3.07e-86FFCP PHASE2:Mm9::chr6:30620092..30620097,+#_54f00467cd82acee79d43bd2926a04e3p@chr6:30620092..30620097, +
2.74e-44FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_2055171c13825d769f2d510921443213p@chr9:42206784..42206793, -
2.74e-44FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_2055171c13825d769f2d510921443213p4@Otogl
2.74e-44FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_2055171c13825d769f2d510921443213p@chr15:103146966..103146971, -
2.74e-44FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_2055171c13825d769f2d510921443213p@chr7:139597684..139597691, +
2.74e-44FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_2055171c13825d769f2d510921443213p2@Tecta
2.74e-44FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_2055171c13825d769f2d510921443213p1@Tectb
2.74e-44FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_2055171c13825d769f2d510921443213p@chr9:42206730..42206739, -
2.74e-44FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_2055171c13825d769f2d510921443213p2@Otol1
2.74e-44FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_2055171c13825d769f2d510921443213p6@Jag1
2.74e-44FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_2055171c13825d769f2d510921443213p1@Otogl
2.74e-44FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_2055171c13825d769f2d510921443213p11@Tecta
2.74e-44FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_2055171c13825d769f2d510921443213p2@uc007rhb.1
2.74e-44FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_2055171c13825d769f2d510921443213p@chr14:102297747..102297765, +
2.74e-44FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_2055171c13825d769f2d510921443213p@chr7:29733825..29733837, -
2.74e-44FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_2055171c13825d769f2d510921443213p4@Tecta
2.74e-44FFCP PHASE2:Mm9::chr14:102295617..102295622,+#_2055171c13825d769f2d510921443213p@chr14:102295617..102295622, +
2.74e-44FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_2055171c13825d769f2d510921443213p1@Otol1
2.74e-44FFCP PHASE2:Mm9::chr9:40215608..40215613,-#_2055171c13825d769f2d510921443213p@chr9:40215608..40215613, -
2.74e-44FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_2055171c13825d769f2d510921443213p@chr9:42207697..42207705, -
2.74e-44FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_2055171c13825d769f2d510921443213p@chr12:77084875..77084885, +
2.74e-44FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_2055171c13825d769f2d510921443213p3@Tecta
2.74e-44FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_2055171c13825d769f2d510921443213p@chr9:42207375..42207384, -
2.74e-44FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_2055171c13825d769f2d510921443213p1@Otogl
2.74e-44FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_2055171c13825d769f2d510921443213p1@Tecta
2.74e-44FFCP PHASE1:Mm9::chr5:115995281..115995324,+#_2055171c13825d769f2d510921443213p14@Pxn
2.74e-44FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_2055171c13825d769f2d510921443213p2@Tectb

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0005014&oldid=1833939"