UBERON:0000158: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
Revision as of 16:56, 26 June 2012
| Name: | membranous layer | ||
|---|---|---|---|
| Xrefs: |
| ||
| Synonyms: | "membranous organ component" EXACT [FMA:82500] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004923(organ component layer) |
|---|
Children
| is a: | UBERON:0005631 (extraembryonic membrane) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11533-120A3 (Amniotic Epithelial Cells, donor1)
- 11547-120B8 (Mesenchymal Stem Cells - amniotic membrane, donor1)
- 11613-122A2 (Amniotic Epithelial Cells, donor2)
- 11627-122B7 (Mesenchymal Stem Cells - amniotic membrane, donor2)
- 11694-123A2 (Amniotic Epithelial Cells, donor3)
- 12235-129G3 (amniotic membrane cells, donor1)
- 12236-129G4 (amniotic membrane cells, donor2)
- 12237-129G5 (amniotic membrane cells, donor3)
- 12238-129G6 (chorionic membrane cells, donor1)
- 12239-129G7 (chorionic membrane cells, donor2)
... further results Mouse (Mus musculus)
- 11533-120A3 (Amniotic Epithelial Cells, donor1)
- 11547-120B8 (Mesenchymal Stem Cells - amniotic membrane, donor1)
- 11613-122A2 (Amniotic Epithelial Cells, donor2)
- 11627-122B7 (Mesenchymal Stem Cells - amniotic membrane, donor2)
- 11694-123A2 (Amniotic Epithelial Cells, donor3)
- 12235-129G3 (amniotic membrane cells, donor1)
- 12236-129G4 (amniotic membrane cells, donor2)
- 12237-129G5 (amniotic membrane cells, donor3)
- 12238-129G6 (chorionic membrane cells, donor1)
- 12239-129G7 (chorionic membrane cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000158 (membranous layer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.64e-155 | FFCP PHASE1:Hg19::chr3:55384975..55384986,-#_3c425cd77a5d4eec65a64a3e56c301f7 | p1@ENST00000469806 |
| 7.64e-155 | FFCP PHASE2:Hg19::chr3:55384975..55384986,-#_3c425cd77a5d4eec65a64a3e56c301f7 | p1@ENST00000469806 |
| 6.02e-144 | FFCP PHASE2:Hg19::chr11:8857295..8857310,-#_8e80d50f9ffc79dec8c22f05fee23f3b | p21@ST5 |
| 6.02e-144 | FFCP PHASE1:Hg19::chr11:8857295..8857310,-#_8e80d50f9ffc79dec8c22f05fee23f3b | p21@ST5 |
| 7.71e-144 | FFCP PHASE2:Hg19::chr11:8857248..8857269,-#_60ac5accc779cf6e9cd81e4858d1b81d | p16@ST5 |
| 7.71e-144 | FFCP PHASE1:Hg19::chr11:8857248..8857269,-#_60ac5accc779cf6e9cd81e4858d1b81d | p16@ST5 |
| 6.53e-141 | FFCP PHASE2:Hg19::chr2:237683156..237683171,+#_04e391b7aa7f046fa990428628b5a5ca | p@chr2:237683156..237683171, + |
| 6.53e-141 | FFCP PHASE1:Hg19::chr2:237683156..237683171,+#_04e391b7aa7f046fa990428628b5a5ca | p@chr2:237683156..237683171, + |
| 1.35e-139 | FFCP PHASE1:Hg19::chr19:36592982..36592993,+#_5cbbad8196f8b6333da07c8481aac010 | p@chr19:36592982..36592993, + |
| 1.35e-139 | FFCP PHASE2:Hg19::chr19:36592982..36592993,+#_5cbbad8196f8b6333da07c8481aac010 | p@chr19:36592982..36592993, + |
| 1.05e-134 | FFCP PHASE1:Hg19::chr11:8857215..8857232,-#_d1ae7e30f6964b1b4c90c7d29d747519 | p17@ST5 |
| 1.05e-134 | FFCP PHASE2:Hg19::chr11:8857215..8857232,-#_d1ae7e30f6964b1b4c90c7d29d747519 | p17@ST5 |
| 1.43e-129 | FFCP PHASE1:Hg19::chr15:68344995..68345013,+#_e6e349dd2d864751ceabbe63a756cb11 | p@chr15:68344995..68345013, + |
| 1.43e-129 | FFCP PHASE2:Hg19::chr15:68344995..68345013,+#_e6e349dd2d864751ceabbe63a756cb11 | p@chr15:68344995..68345013, + |
| 1.6e-126 | FFCP PHASE1:Hg19::chr2:237683212..237683239,+#_6997e99daf63f306087a95b20dd87b7a | p@chr2:237683212..237683239, + |
| 1.6e-126 | FFCP PHASE2:Hg19::chr2:237683212..237683239,+#_6997e99daf63f306087a95b20dd87b7a | p@chr2:237683212..237683239, + |
| 1.01e-125 | FFCP PHASE1:Hg19::chr2:25862154..25862172,-#_723b4298c10cf2bb000fdf9907f8ed12 | p14@DTNB |
| 1.01e-125 | FFCP PHASE2:Hg19::chr2:25862154..25862172,-#_723b4298c10cf2bb000fdf9907f8ed12 | p14@DTNB |
| 6.97e-121 | FFCP PHASE1:Hg19::chr2:237682954..237682971,+#_9b65f2012dccd4c07c1898ffc903d80f | p@chr2:237682954..237682971, + |
| 6.97e-121 | FFCP PHASE2:Hg19::chr2:237682954..237682971,+#_9b65f2012dccd4c07c1898ffc903d80f | p@chr2:237682954..237682971, + |
| 8.75e-121 | FFCP PHASE2:Hg19::chr2:237682990..237683009,+#_aade5739745d6e386b9cc8914ee42959 | p@chr2:237682990..237683009, + |
| 8.75e-121 | FFCP PHASE1:Hg19::chr2:237682990..237683009,+#_aade5739745d6e386b9cc8914ee42959 | p@chr2:237682990..237683009, + |
| 8.22e-119 | FFCP PHASE2:Hg19::chr19:36592925..36592948,+#_5e0964c247e8ec1853a0472b073263c9 | p@chr19:36592925..36592948, + |
| 8.22e-119 | FFCP PHASE1:Hg19::chr19:36592925..36592948,+#_5e0964c247e8ec1853a0472b073263c9 | p@chr19:36592925..36592948, + |
| 2.31e-113 | FFCP PHASE1:Hg19::chr18:6286777..6286797,+#_6396c80ab9d233e609bf57e76b3b1658 | p@chr18:6286777..6286797, + |
| 2.31e-113 | FFCP PHASE2:Hg19::chr18:6286777..6286797,+#_6396c80ab9d233e609bf57e76b3b1658 | p@chr18:6286777..6286797, + |
| 7.03e-112 | FFCP PHASE2:Hg19::chr2:237683203..237683210,+#_3d5425fdcf0cf4863e2d731568e68027 | p@chr2:237683203..237683210, + |
| 7.03e-112 | FFCP PHASE1:Hg19::chr17:2278441..2278454,+#_3d5425fdcf0cf4863e2d731568e68027 | p13@SGSM2 |
| 7.03e-112 | FFCP PHASE2:Hg19::chr17:2278441..2278454,+#_3d5425fdcf0cf4863e2d731568e68027 | p13@SGSM2 |
| 7.03e-112 | FFCP PHASE1:Hg19::chr2:237683203..237683210,+#_3d5425fdcf0cf4863e2d731568e68027 | p@chr2:237683203..237683210, + |
| 7.87e-108 | FFCP PHASE2:Hg19::chr11:1946293..1946319,+#_9413bbcad3087c3a188fe991f9eaba06 | p11@TNNT3 |
| 7.87e-108 | FFCP PHASE1:Hg19::chr11:1946293..1946319,+#_9413bbcad3087c3a188fe991f9eaba06 | p11@TNNT3 |
| 3.01e-103 | FFCP PHASE1:Hg19::chr6:12161831..12161855,+#_0924d918ae2d58568352c2f5c258ea79 | p@chr6:12161831..12161855, + |
| 3.01e-103 | FFCP PHASE2:Hg19::chr6:12161831..12161855,+#_0924d918ae2d58568352c2f5c258ea79 | p@chr6:12161831..12161855, + |
| 4.29e-103 | FFCP PHASE1:Hg19::chr20:61287795..61287809,+#_1570b50229ed3ec0b1a7265ad1d3567b | p4@SLCO4A1 |
| 4.29e-103 | FFCP PHASE2:Hg19::chr20:61287795..61287809,+#_1570b50229ed3ec0b1a7265ad1d3567b | p4@SLCO4A1 |
| 4.86e-100 | FFCP PHASE2:Hg19::chr13:43636294..43636306,+#_5e7b68474f199fa15e7132723a3834d1 | p@chr13:43636294..43636306, + |
| 4.86e-100 | FFCP PHASE1:Hg19::chr13:43636294..43636306,+#_5e7b68474f199fa15e7132723a3834d1 | p@chr13:43636294..43636306, + |
| 1.22e-99 | FFCP PHASE2:Hg19::chr19:36592910..36592917,+#_89889b05eae5362fa1c5f2707b07650c | p@chr19:36592910..36592917, + |
| 1.22e-99 | FFCP PHASE1:Hg19::chr19:36592910..36592917,+#_89889b05eae5362fa1c5f2707b07650c | p@chr19:36592910..36592917, + |
| 1.22e-99 | FFCP PHASE1:Hg19::chr10:134227398..134227410,+#_89889b05eae5362fa1c5f2707b07650c | p@chr10:134227398..134227410, + |
| 1.22e-99 | FFCP PHASE2:Hg19::chr10:134227398..134227410,+#_89889b05eae5362fa1c5f2707b07650c | p@chr10:134227398..134227410, + |
| 1.38e-99 | FFCP PHASE1:Hg19::chr2:191897854..191897865,-#_fb7afb04129d06970ca06f63bbebf51f | p@chr2:191897854..191897865, - |
| 1.38e-99 | FFCP PHASE2:Hg19::chr2:191897854..191897865,-#_fb7afb04129d06970ca06f63bbebf51f | p@chr2:191897854..191897865, - |
| 1.57e-99 | FFCP PHASE1:Hg19::chr17:2278481..2278491,+#_229489ef64eb71a3702350f1fd9d75b0 | p14@SGSM2 |
| 1.57e-99 | FFCP PHASE2:Hg19::chr17:2278481..2278491,+#_229489ef64eb71a3702350f1fd9d75b0 | p14@SGSM2 |
| 2.03e-99 | FFCP PHASE1:Hg19::chr6:31083761..31083775,-#_ba794eb495606e35f04e2645aadce662 | p@chr6:31083761..31083775, - |
| 2.03e-99 | FFCP PHASE2:Hg19::chr6:31083761..31083775,-#_ba794eb495606e35f04e2645aadce662 | p@chr6:31083761..31083775, - |
| 2.63e-99 | FFCP PHASE1:Hg19::chr2:237682972..237682977,+#_2a06819d3a6182bee9fdd5cdf0812f2f | p@chr2:237682972..237682977, + |
| 2.63e-99 | FFCP PHASE2:Hg19::chr2:237682972..237682977,+#_2a06819d3a6182bee9fdd5cdf0812f2f | p@chr2:237682972..237682977, + |
| 4.6e-98 | FFCP PHASE2:Hg19::chr20:61288249..61288259,+#_776c0035e564eaa785d9fa5430a26327 | p12@SLCO4A1 |
| 4.6e-98 | FFCP PHASE1:Hg19::chr10:131344593..131344605,+#_776c0035e564eaa785d9fa5430a26327 | p@chr10:131344593..131344605, + |
| 4.6e-98 | FFCP PHASE1:Hg19::chr14:104202639..104202646,-#_776c0035e564eaa785d9fa5430a26327 | p@chr14:104202639..104202646, - |
| 4.6e-98 | FFCP PHASE2:Hg19::chr14:104202639..104202646,-#_776c0035e564eaa785d9fa5430a26327 | p@chr14:104202639..104202646, - |
| 4.6e-98 | FFCP PHASE1:Hg19::chrX:48374277..48374289,+#_776c0035e564eaa785d9fa5430a26327 | p@chrX:48374277..48374289, + |
| 4.6e-98 | FFCP PHASE2:Hg19::chr10:131344593..131344605,+#_776c0035e564eaa785d9fa5430a26327 | p@chr10:131344593..131344605, + |
| 4.6e-98 | FFCP PHASE1:Hg19::chr20:61288222..61288232,+#_776c0035e564eaa785d9fa5430a26327 | p14@SLCO4A1 |
| 4.6e-98 | FFCP PHASE2:Hg19::chrX:48374277..48374289,+#_776c0035e564eaa785d9fa5430a26327 | p@chrX:48374277..48374289, + |
| 4.6e-98 | FFCP PHASE1:Hg19::chr9:88126069..88126080,-#_776c0035e564eaa785d9fa5430a26327 | p@chr9:88126069..88126080, - |
| 4.6e-98 | FFCP PHASE1:Hg19::chr20:61288249..61288259,+#_776c0035e564eaa785d9fa5430a26327 | p12@SLCO4A1 |
| 4.6e-98 | FFCP PHASE2:Hg19::chr9:88126069..88126080,-#_776c0035e564eaa785d9fa5430a26327 | p@chr9:88126069..88126080, - |
| 4.6e-98 | FFCP PHASE2:Hg19::chr20:61288222..61288232,+#_776c0035e564eaa785d9fa5430a26327 | p14@SLCO4A1 |
| 1.4e-94 | FFCP PHASE1:Hg19::chr17:38875395..38875406,-#_8534854ad8e5a44066bca6d5393686cb | p2@KRT223P |
| 1.4e-94 | FFCP PHASE2:Hg19::chr17:38875395..38875406,-#_8534854ad8e5a44066bca6d5393686cb | p2@KRT223P |
| 7.56e-90 | FFCP PHASE1:Hg19::chr19:36592959..36592975,+#_87d3e2c1319e548e8b69ed13429f5f2d | p@chr19:36592959..36592975, + |
| 7.56e-90 | FFCP PHASE2:Hg19::chr19:36592959..36592975,+#_87d3e2c1319e548e8b69ed13429f5f2d | p@chr19:36592959..36592975, + |
| 1.9e-89 | FFCP PHASE1:Hg19::chr2:237683038..237683048,+#_12e150aed405342813c0f09e14c60ae9 | p@chr2:237683038..237683048, + |
| 1.9e-89 | FFCP PHASE2:Hg19::chr2:237683038..237683048,+#_12e150aed405342813c0f09e14c60ae9 | p@chr2:237683038..237683048, + |
| 1.43e-88 | FFCP PHASE1:Hg19::chr5:128301279..128301283,+#_5944c8853bb8e4e0064c267e39a31002 | p5@SLC27A6 |
| 1.43e-88 | FFCP PHASE2:Hg19::chr5:128301279..128301283,+#_5944c8853bb8e4e0064c267e39a31002 | p5@SLC27A6 |
| 1.36e-87 | FFCP PHASE1:Hg19::chr17:38875358..38875392,-#_08e58abfe2904fcd4931da5420373b2a | p1@KRT223P |
| 1.36e-87 | FFCP PHASE2:Hg19::chr17:38875358..38875392,-#_08e58abfe2904fcd4931da5420373b2a | p1@KRT223P |
| 2.47e-87 | FFCP PHASE1:Hg19::chr11:1949886..1949907,+#_73e425dc138174ee0f69bc2301b94bd3 | p@chr11:1949886..1949907, + |
| 2.47e-87 | FFCP PHASE2:Hg19::chr11:1949886..1949907,+#_73e425dc138174ee0f69bc2301b94bd3 | p@chr11:1949886..1949907, + |
| 2.93e-87 | FFCP PHASE2:Hg19::chr1:147232669..147232676,-#_41a397fe07b0ec1c8ebb2eb07c81deb3 | p4@GJA5 |
| 2.93e-87 | FFCP PHASE1:Hg19::chr1:147232669..147232676,-#_41a397fe07b0ec1c8ebb2eb07c81deb3 | p4@GJA5 |
| 8.19e-87 | FFCP PHASE1:Hg19::chr11:122288906..122288919,-#_dfe71c9246ade0901913302e6dfdc988 | p@chr11:122288906..122288919, - |
| 8.19e-87 | FFCP PHASE2:Hg19::chr11:122288906..122288919,-#_dfe71c9246ade0901913302e6dfdc988 | p@chr11:122288906..122288919, - |
| 1.58e-86 | FFCP PHASE1:Mm9::chr6:48879890..48879896,+#_3ee816ccb6e15afa75c10e25f34371a1 | p1@1600015I10Rik |
| 1.58e-86 | FFCP PHASE1:Mm9::chr13:27339701..27339760,+#_3ee816ccb6e15afa75c10e25f34371a1 | p@chr13:27339701..27339760, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr11:55223511..55223524,-#_3ee816ccb6e15afa75c10e25f34371a1 | p@chr11:55223511..55223524, - |
| 1.58e-86 | FFCP PHASE1:Mm9::chr6:97907033..97907043,+#_3ee816ccb6e15afa75c10e25f34371a1 | p@chr6:97907033..97907043, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr13:27337674..27337690,+#_3ee816ccb6e15afa75c10e25f34371a1 | p@chr13:27337674..27337690, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr13:61265572..61265576,-#_3ee816ccb6e15afa75c10e25f34371a1 | p2@Ctsr |
| 1.58e-86 | FFCP PHASE2:Mm9::chr13:27288509..27288515,+#_3ee816ccb6e15afa75c10e25f34371a1 | p1@Prl3c1 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr11:55223511..55223524,-#_3ee816ccb6e15afa75c10e25f34371a1 | p@chr11:55223511..55223524, - |
| 1.58e-86 | FFCP PHASE1:Mm9::chr14:26461997..26462039,+#_3ee816ccb6e15afa75c10e25f34371a1 | p@chr14:26461997..26462039, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr7:17749305..17749310,+#_3ee816ccb6e15afa75c10e25f34371a1 | p@chr7:17749305..17749310, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr6:97907033..97907043,+#_3ee816ccb6e15afa75c10e25f34371a1 | p@chr6:97907033..97907043, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chrX:136335482..136335502,+#_3ee816ccb6e15afa75c10e25f34371a1 | p3@Cldn2 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr13:61040767..61040776,-#_3ee816ccb6e15afa75c10e25f34371a1 | p@chr13:61040767..61040776, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chr13:27339701..27339760,+#_3ee816ccb6e15afa75c10e25f34371a1 | p@chr13:27339701..27339760, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr7:17798686..17798694,+#_3ee816ccb6e15afa75c10e25f34371a1 | p@chr7:17798686..17798694, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr5:125523411..125523420,-#_3ee816ccb6e15afa75c10e25f34371a1 | p24@Ncor2 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr7:17788842..17788851,+#_3ee816ccb6e15afa75c10e25f34371a1 | p2@Psg29 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr9:111108246..111108253,+#_3ee816ccb6e15afa75c10e25f34371a1 | p@chr9:111108246..111108253, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr13:33048652..33048685,+#_3ee816ccb6e15afa75c10e25f34371a1 | p@chr13:33048652..33048685, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chrX:136335482..136335502,+#_3ee816ccb6e15afa75c10e25f34371a1 | p3@Cldn2 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr5:114862554..114862564,+#_3ee816ccb6e15afa75c10e25f34371a1 | p@chr5:114862554..114862564, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr7:17788797..17788806,+#_3ee816ccb6e15afa75c10e25f34371a1 | p4@Psg29 |
